Rv3794 - c.2409C>T


Drug resistance types
0 Sensitive 0 RR-TB 11 HR-TB 4 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 4 Other
lineage Counts
lineage Count
lineage2.2.1 12
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.9 1
La2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9 1
La3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 27
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR25206934 Pre-XDR-TB lineage2.2.1 None
SRR20632820 Pre-XDR-TB lineage2.2.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR20632797 MDR-TB lineage2.2.1 None
SRR671866 MDR-TB lineage2.2.1 cn
SRR8651593 Pre-XDR-TB lineage2.2.1 cn
SRR8651614 Pre-XDR-TB lineage2.2.1 cn
SRR17111242 Other La2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR671779 Pre-XDR-TB lineage2.2.1 cn
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR21887661 MDR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
SRR25207323 Pre-XDR-TB lineage2.2.1 None
ERR181744 HR-TB La3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR8651559 Pre-XDR-TB lineage2.2.1 cn
SRR18002884 Pre-XDR-TB lineage2.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10040183 MDR-TB lineage2.2.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None