Rv3795 - c.3165C>A


Drug resistance types
120 Sensitive 11 RR-TB 31 HR-TB 91 MDR-TB 35 Pre-XDR-TB 0 XDR-TB 23 Other
lineage Counts
lineage Count
lineage4.1.1.3 306
lineage4.1.1.3;lineage4.3.4.2 3
lineage2.2.1.2;lineage4.1.1.3 1
lineage4.1.1.3;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 311
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29217219 Sensitive lineage4.1.1.3 None
SRR19276644 Pre-XDR-TB lineage4.1.1.3 None
SRR1180195 Sensitive lineage4.1.1.3 None
SRR22251323 Sensitive lineage4.1.1.3 None
ERR13292244 Sensitive lineage4.1.1.3 None
SRR1180186 Sensitive lineage4.1.1.3 None
SRR21728177 Sensitive lineage4.1.1.3 None
SRR13583486 HR-TB lineage4.1.1.3 None
SRR29056002 Sensitive lineage4.1.1.3 None
SRR18914183 Sensitive lineage4.1.1.3 None
ERR13260002 MDR-TB lineage4.1.1.3 None
SRR30340066 Sensitive lineage4.1.1.3 None
SRR28393381 MDR-TB lineage4.1.1.3 None
ERR13285226 Sensitive lineage4.1.1.3 None
ERR13260623 MDR-TB lineage4.1.1.3 None
ERR3148207 Sensitive lineage4.1.1.3 mx
SRR21713561 Other lineage4.1.1.3 None
ERR13289780 Other lineage4.1.1.3 None
ERR6052076 Sensitive lineage4.1.1.3 None
ERR13260381 MDR-TB lineage4.1.1.3 None
SRR29053129 Pre-XDR-TB lineage4.1.1.3 None
SRR21728710 Other lineage4.1.1.3 None
SRR28858672 RR-TB lineage4.1.1.3 None
ERR3287857 Pre-XDR-TB lineage4.1.1.3;lineage4.3.4.2 None
SAMN02585928 Other lineage4.1.1.3 za
ERR4820879 Sensitive lineage4.1.1.3 None
SRR16157124 RR-TB lineage4.1.1.3 None
SRR28409678 Sensitive lineage4.1.1.3 None
SRR1181130 Other lineage4.1.1.3 None
SRR6045621 Other lineage4.1.1.3 None
SRR16370418 Pre-XDR-TB lineage4.1.1.3 None
SRR28705416 MDR-TB lineage4.1.1.3 None
ERR12117978 MDR-TB lineage4.1.1.3 None
SRR28393426 MDR-TB lineage4.1.1.3 None
SRR28357648 Other lineage4.1.1.3 None
SRR28045686 Sensitive lineage4.1.1.3 None
SRR28389842 Sensitive lineage4.1.1.3 None
SRR28514695 Sensitive lineage4.1.1.3 None
SRR28393392 Pre-XDR-TB lineage4.1.1.3 None
ERR779853 Sensitive lineage4.1.1.3 pe
SRR28357656 Other lineage4.1.1.3 None
ERR775312 HR-TB lineage4.1.1.3 pe
SRR28389885 MDR-TB lineage4.1.1.3 None
SRR28389890 Other lineage4.1.1.3 None
ERR775343 HR-TB lineage4.1.1.3 pe
SRR28393708 HR-TB lineage4.1.1.3 None
ERR7910867 MDR-TB lineage4.1.1.3 pe
SRR28389850 Other lineage4.1.1.3 None
SRR28683941 MDR-TB lineage4.1.1.3 None
SRR30049956 Sensitive lineage4.1.1.3 None
ERR751404 MDR-TB lineage4.1.1.3 pe
ERR751529 Sensitive lineage4.1.1.3 pe
ERR11591457 Sensitive lineage4.1.1.3 None
ERR751502 MDR-TB lineage4.1.1.3 pe
ERR751493 HR-TB lineage4.1.1.3 pe
ERR751505 HR-TB lineage4.1.1.3 pe
ERR751470 Pre-XDR-TB lineage4.1.1.3 pe
ERR779881 HR-TB lineage4.1.1.3 pe
ERR751625 MDR-TB lineage4.1.1.3 pe
ERR4820737 Sensitive lineage4.1.1.3 None
ERR4178258 Sensitive lineage4.1.1.3 None
SAMEA2535095 HR-TB lineage4.1.1.3 None
ERR751539 MDR-TB lineage4.1.1.3 pe
ERR2516621 MDR-TB lineage4.1.1.3 nl
ERR2516605 MDR-TB lineage4.1.1.3 pe
ERR2516625 Pre-XDR-TB lineage4.1.1.3 pe
ERR4813459 MDR-TB lineage4.1.1.3 pe
ERR4813032 RR-TB lineage4.1.1.3 pe
ERR4813174 Pre-XDR-TB lineage4.1.1.3 pe
ERR4813199 Pre-XDR-TB lineage4.1.1.3 pe
ERR4813213 Pre-XDR-TB lineage4.1.1.3 pe
ERR3287675 RR-TB lineage4.1.1.3 pe
ERR3287495 Pre-XDR-TB lineage4.1.1.3 pe
ERR3287331 Pre-XDR-TB lineage4.1.1.3 pe
ERR3287356 MDR-TB lineage4.1.1.3 pe
ERR3287383 MDR-TB lineage4.1.1.3 pe
ERR3287387 Pre-XDR-TB lineage4.1.1.3 pe
ERR3287415 MDR-TB lineage4.1.1.3 pe
ERR3287446 HR-TB lineage4.1.1.3 pe
ERR3287814 MDR-TB lineage4.1.1.3 pe
ERR3287848 MDR-TB lineage4.1.1.3 pe
ERR2512834 Sensitive lineage4.1.1.3 gb
SRR1181060 Sensitive lineage4.1.1.3 None
SRR29217207 Sensitive lineage4.1.1.3 None
ERR12118065 MDR-TB lineage4.1.1.3 None
SRR7069930 Sensitive lineage4.1.1.3 None
SRR26111909 Other lineage4.1.1.3 None
SRR16915730 RR-TB lineage4.1.1.3 None
SRR28389880 MDR-TB lineage4.1.1.3 None
ERR6865321 Sensitive lineage4.1.1.3 None
SRR30049952 Other lineage4.1.1.3 None
SRR28514689 Other lineage4.1.1.3 None
ERR4813316 MDR-TB lineage4.1.1.3 None
SRR29055702 Sensitive lineage4.1.1.3 None
SRR28393545 MDR-TB lineage4.1.1.3 None
SRR28394046 MDR-TB lineage4.1.1.3 None
ERR1034741 HR-TB lineage4.1.1.3 pe
SRR22248474 Sensitive lineage4.1.1.3 None
SRR28389847 MDR-TB lineage4.1.1.3 None
ERR4812817 MDR-TB lineage4.1.1.3 None
SRR1184012 Other lineage4.1.1.3 None
SRR22248483 Sensitive lineage4.1.1.3 None
ERR553046 HR-TB lineage4.1.1.3 None
ERR3148168 HR-TB lineage4.1.1.3 mx
ERR12118030 MDR-TB lineage4.1.1.3 None
ERR12118060 MDR-TB lineage4.1.1.3 None
ERR8774289 MDR-TB lineage4.1.1.3 None
SRR18665455 Sensitive lineage4.1.1.3 None
SRR6896213 Sensitive lineage4.1.1.3 None
ERR9029872 Pre-XDR-TB lineage4.1.1.3;lineage4.3.4.2 None
ERR7911344 MDR-TB lineage4.1.1.3 pe
ERR8976019 Sensitive lineage4.1.1.3 None
SRR29053263 Sensitive lineage4.1.1.3 None
ERR4813052 MDR-TB lineage4.1.1.3 None
SRR30340067 Other lineage4.1.1.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4812228 MDR-TB lineage4.1.1.3 pe
SRR30296334 Sensitive lineage4.1.1.3 None
ERR3148171 MDR-TB lineage4.1.1.3 mx
SRR21658390 Sensitive lineage4.1.1.3 None
ERR4024838 MDR-TB lineage4.1.1.3 None
ERR4024562 Sensitive lineage4.1.1.3 None
SRR26112039 Sensitive lineage4.1.1.3 None
SRR6982166 Sensitive lineage4.1.1.3 None
ERR6866049 Sensitive lineage4.1.1.3 None
ERR4822202 Sensitive lineage4.1.1.3 None
SRR28683939 Sensitive lineage4.1.1.3 None
SRR21689478 Sensitive lineage4.1.1.3 None
ERR2515985 Sensitive lineage4.1.1.3 None
ERR3148159 MDR-TB lineage4.1.1.3 mx
ERR13291765 Sensitive lineage4.1.1.3 None
ERR12117928 MDR-TB lineage4.1.1.3 None
SRR13870395 MDR-TB lineage4.1.1.3 None
ERR3275515 Sensitive lineage4.1.1.3 nl
SRR29464859 Sensitive lineage4.1.1.3 None
ERR13290018 Other lineage4.1.1.3 None
ERR4817110 Other lineage4.1.1.3 None
ERR4423646 MDR-TB lineage4.1.1.3 None
ERR6865757 Sensitive lineage4.1.1.3 None
SRR29893832 Sensitive lineage4.1.1.3 None
ERR6866046 Sensitive lineage4.1.1.3 None
ERR13261647 MDR-TB lineage4.1.1.3 None
SRR29055973 Sensitive lineage4.1.1.3 None
SRR13870362 Pre-XDR-TB lineage4.1.1.3 None
SRR29219663 MDR-TB lineage4.1.1.3 None
SRR7070336 Sensitive lineage4.1.1.3 None
ERR6865369 MDR-TB lineage4.1.1.3 None
ERR13260664 MDR-TB lineage4.1.1.3 None
ERR4024969 MDR-TB lineage4.1.1.3 None
SRR28859954 Sensitive lineage4.1.1.3 None
ERR4813561 HR-TB lineage4.1.1.3 None
ERR4025013 HR-TB lineage4.1.1.3 None
SRR28394225 MDR-TB lineage4.1.1.3 None
SRR7070267 Sensitive lineage4.1.1.3 None
ERR3287844 MDR-TB lineage4.1.1.3 pe
ERR4024920 MDR-TB lineage4.1.1.3 None
SRR28045035 Sensitive lineage4.1.1.3 None
SRR28045197 Sensitive lineage4.1.1.3 None
SRR28394237 MDR-TB lineage4.1.1.3 None
SRR22461584 MDR-TB lineage4.1.1.3 None
SRR27980490 MDR-TB lineage4.1.1.3 None
SRR28389884 Pre-XDR-TB lineage2.2.1.2;lineage4.1.1.3 None
ERR751584 MDR-TB lineage4.1.1.3 pe
SRR28045819 Sensitive lineage4.1.1.3 None
SRR28393654 MDR-TB lineage4.1.1.3 None
ERR751392 MDR-TB lineage4.1.1.3 pe
ERR779859 HR-TB lineage4.1.1.3 pe
ERR775314 RR-TB lineage4.1.1.3 pe
ERR779896 MDR-TB lineage4.1.1.3 pe
ERR553045 HR-TB lineage4.1.1.3 None
SRR22248473 Sensitive lineage4.1.1.3 None
SRR28389834 Sensitive lineage4.1.1.3 None
ERR4011979 Sensitive lineage4.1.1.3 None
SRR2100145 Sensitive lineage4.1.1.3 None
ERR3148166 Sensitive lineage4.1.1.3 mx
ERR2516515 Sensitive lineage4.1.1.3 pe
ERR2516728 Pre-XDR-TB lineage4.1.1.3 pe
ERR2516664 Pre-XDR-TB lineage4.1.1.3 pe
ERR2516525 Pre-XDR-TB lineage4.1.1.3 pe
ERR2516573 Pre-XDR-TB lineage4.1.1.3 pe
ERR2516709 Pre-XDR-TB lineage4.1.1.3 pe
ERR2516663 Pre-XDR-TB lineage4.1.1.3 pe
ERR2516543 MDR-TB lineage4.1.1.3 pe
ERR4813507 MDR-TB lineage4.1.1.3 pe
ERR4812375 MDR-TB lineage4.1.1.3 pe
ERR3287863 Pre-XDR-TB lineage4.1.1.3 pe
ERR3287867 Pre-XDR-TB lineage4.1.1.3 pe
ERR3287883 MDR-TB lineage4.1.1.3 pe
ERR3287575 HR-TB lineage4.1.1.3 pe
ERR2513105 Sensitive lineage4.1.1.3 gb
ERR8975497 Sensitive lineage4.1.1.3 None
SRR6982459 Sensitive lineage4.1.1.3 None
ERR6865371 MDR-TB lineage4.1.1.3 None
ERR2200096 Sensitive lineage4.1.1.3 sz
SRR6855929 Sensitive lineage4.1.1.3 None
ERR12118032 Pre-XDR-TB lineage4.1.1.3 None
SRR28381181 Other lineage4.1.1.3 None
ERR2515435 Sensitive lineage4.1.1.3 za
SRR21675434 Sensitive lineage4.1.1.3 None
ERR13285225 Sensitive lineage4.1.1.3 None
ERR8774193 Sensitive lineage4.1.1.3 None
ERR11465772 Sensitive lineage4.1.1.3 None
ERR6865876 Sensitive lineage4.1.1.3 None
SRR1183066 Sensitive lineage4.1.1.3 None
ERR4813219 Pre-XDR-TB lineage4.1.1.3 None
ERR1034714 MDR-TB lineage4.1.1.3 pe
SRR6046374 Other lineage4.1.1.3 gb
ERR775379 Pre-XDR-TB lineage4.1.1.3 pe
SAMEA5570051 Pre-XDR-TB lineage4.1.1.3;lineage4.3.4.2 None
ERR2515670 RR-TB lineage4.1.1.3 None
ERR553045_ERR553047_ERR553046 HR-TB lineage4.1.1.3 None
SRR28375402 Sensitive lineage4.1.1.3 None
ERR4178120 Sensitive lineage4.1.1.3 None
SRR28393746 MDR-TB lineage4.1.1.3 None
ERR2515320 Sensitive lineage4.1.1.3 za
ERR6865820 Sensitive lineage4.1.1.3 None
ERR1034670 MDR-TB lineage4.1.1.3 co
ERR4813094 Pre-XDR-TB lineage4.1.1.3 None
ERR4178202 Sensitive lineage4.1.1.3 None
SRR18665442 MDR-TB lineage4.1.1.3 None
SRR18665464 MDR-TB lineage4.1.1.3 None
SRR26112306 Sensitive lineage4.1.1.3 None
SRR16370572 Sensitive lineage4.1.1.3 None
ERR11465107 Sensitive lineage4.1.1.3 None
SRR29893831 Sensitive lineage4.1.1.3 None
ERR4025073 Sensitive lineage4.1.1.3 None
SRR7070208 Sensitive lineage4.1.1.3 None
ERR8975983 Sensitive lineage4.1.1.3 None
ERR6879016 MDR-TB lineage4.1.1.3 None
ERR6865391 HR-TB lineage4.1.1.3 None
SRR7068987 Sensitive lineage4.1.1.3 None
SRR18912072 Sensitive lineage4.1.1.3 None
SRR28389878 MDR-TB lineage4.1.1.3 None
ERR13261955 MDR-TB lineage4.1.1.3 None
SRR6981905 Sensitive lineage4.1.1.3 None
SRR6982116 Sensitive lineage4.1.1.3 None
SRR11972219 Sensitive lineage4.1.1.3 None
ERR4813699 MDR-TB lineage4.1.1.3 None
SRR28393391 MDR-TB lineage4.1.1.3 None
SRR28393619 Pre-XDR-TB lineage4.1.1.3 None
SRR29051280 HR-TB lineage4.1.1.3 None
ERR3148230 Sensitive lineage4.1.1.3 mx
ERR6052071 Sensitive lineage4.1.1.3 None
SRR29094370 RR-TB lineage4.1.1.3 None
ERR4813336 MDR-TB lineage4.1.1.3 None
SRR28389906 Sensitive lineage4.1.1.3 None
SRR22461603 HR-TB lineage4.1.1.3 None
SAMN02585954 Sensitive lineage4.1.1.3 za
SRR1183017 Sensitive lineage4.1.1.3 None
SRR18665439 Sensitive lineage4.1.1.3 None
SRR28389865 MDR-TB lineage4.1.1.3 None
SRR29267194 Sensitive lineage4.1.1.3 None
SRR30333237 Sensitive lineage4.1.1.3 None
SRR28394176 Pre-XDR-TB lineage4.1.1.3 None
SRR29267200 Sensitive lineage4.1.1.3 None
ERR4819950 MDR-TB lineage4.1.1.3 gb
SRR28394219 MDR-TB lineage4.1.1.3;lineage4.1.2.1 None
SRR22461609 HR-TB lineage4.1.1.3 None
SRR28044440 Other lineage4.1.1.3 None
SRR28393382 MDR-TB lineage4.1.1.3 None
SRR28393792 MDR-TB lineage4.1.1.3 None
SRR28705413 Other lineage4.1.1.3 None
SRR28389859 Sensitive lineage4.1.1.3 None
SRR22461702 MDR-TB lineage4.1.1.3 None
ERR7911375 MDR-TB lineage4.1.1.3 pe
ERR751510 MDR-TB lineage4.1.1.3 pe
ERR751634 MDR-TB lineage4.1.1.3 pe
ERR8975496 Sensitive lineage4.1.1.3 None
ERR11488977 RR-TB lineage4.1.1.3 None
ERR775385 Pre-XDR-TB lineage4.1.1.3 pe
ERR751407 HR-TB lineage4.1.1.3 pe
ERR751627 MDR-TB lineage4.1.1.3 pe
SRR28393884 Pre-XDR-TB lineage4.1.1.3 None
SRR19317597 Sensitive lineage4.1.1.3 None
ERR4812297 Pre-XDR-TB lineage4.1.1.3 None
SRR2101747 Sensitive lineage4.1.1.3 None
ERR4812714 MDR-TB lineage4.1.1.3 pe
ERR2510213 HR-TB lineage4.1.1.3 pe
ERR2510147 HR-TB lineage4.1.1.3 pe
ERR2510144 HR-TB lineage4.1.1.3 pe
ERR2510222 HR-TB lineage4.1.1.3 pe
ERR4813420 Pre-XDR-TB lineage4.1.1.3 pe
ERR4813453 MDR-TB lineage4.1.1.3 pe
ERR4812697 HR-TB lineage4.1.1.3 pe
ERR4812775 HR-TB lineage4.1.1.3 pe
ERR3287516 MDR-TB lineage4.1.1.3 pe
ERR3287601 MDR-TB lineage4.1.1.3 pe
ERR3287656 MDR-TB lineage4.1.1.3 pe
ERR3287667 HR-TB lineage4.1.1.3 pe
ERR2513707 Sensitive lineage4.1.1.3 gb
SRR28389827 Sensitive lineage4.1.1.3 None
SRR23252667 Sensitive lineage4.1.1.3 None
SRR30182407 MDR-TB lineage4.1.1.3 None
SRR28393443 MDR-TB lineage4.1.1.3 None
ERR6866036 MDR-TB lineage4.1.1.3 None
SRR28389869 MDR-TB lineage4.1.1.3 None
SRR21675651 Sensitive lineage4.1.1.3 None
ERR4025137 Sensitive lineage4.1.1.3 None
SRR26112824 Sensitive lineage4.1.1.3 None
ERR6866939 Sensitive lineage4.1.1.3 None
ERR4809246 RR-TB lineage4.1.1.3 za
SRR1181259 Sensitive lineage4.1.1.3 None
SRR6856001 Sensitive lineage4.1.1.3 None
ERR2446396 Sensitive lineage4.1.1.3 nl
ERR2515277 RR-TB lineage4.1.1.3 za
SRR6855823 Sensitive lineage4.1.1.3 None
ERR2515116 Sensitive lineage4.1.1.3 za
SRR28389899 Sensitive lineage4.1.1.3 None
SRR28357662 Other lineage4.1.1.3 None
SRR28381187 Sensitive lineage4.1.1.3 None
SRR28389831 Other lineage4.1.1.3 None