SRR23316605
|
Sensitive
|
lineage1.1.1
|
None
|
SRR26442319
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26800483
|
Sensitive
|
lineage4.8
|
None
|
SRR28046061
|
Sensitive
|
lineage3
|
None
|
SRR28046107
|
Sensitive
|
lineage3
|
None
|
SRR28046119
|
Sensitive
|
lineage3
|
None
|
SRR28045918
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21887705
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069440
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915766
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28119826
|
Other
|
lineage2.2.1
|
None
|
SRR28045688
|
Other
|
lineage1.1.2
|
None
|
SRR28046108
|
Sensitive
|
lineage3
|
None
|
SRR28044601
|
Sensitive
|
lineage3
|
None
|
SRR28045589
|
Sensitive
|
lineage4.2.2
|
None
|
SRR28045855
|
Other
|
lineage1.2.2
|
None
|
SRR28119832
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR16915742
|
Sensitive
|
lineage4.7
|
None
|
SRR26800470
|
Sensitive
|
lineage3
|
None
|
SRR28119779
|
Other
|
lineage2.2.2
|
None
|
SRR28044872
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21887680
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25628580
|
Sensitive
|
lineage4.5
|
None
|
SRR16915710
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915714
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28045473
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069433
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206912
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR26442320
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28119840
|
RR-TB
|
lineage2.2.1
|
None
|
SRR23961522
|
Other
|
La1.7.1
|
None
|
SRR23961613
|
Other
|
La1.2
|
None
|
SRR16915712
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25207055
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25460166
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23961419
|
Other
|
La1.7.1
|
None
|
SRR28044604
|
Sensitive
|
lineage3
|
None
|
SRR28044843
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044911
|
Sensitive
|
lineage3.1.2
|
None
|
SRR16915767
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860042
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR16915751
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915721
|
Sensitive
|
lineage4.1.2
|
None
|
SRR16915776
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28045425
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25207052
|
MDR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SRR25207305
|
MDR-TB
|
lineage4.5
|
None
|
SRR28045410
|
Other
|
lineage4.8
|
None
|
SRR28045657
|
Sensitive
|
lineage1.1.2
|
None
|
SRR23316612
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28046287
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR23961502
|
Other
|
La1.7.1
|
None
|
SRR28045881
|
Sensitive
|
lineage4.9
|
None
|
SRR23316632
|
HR-TB
|
lineage1.1.1;lineage2.2.1
|
None
|
SRR28868440
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858471
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044377
|
Sensitive
|
lineage1.1.2
|
None
|
SRR23961396
|
Other
|
La1.2
|
None
|
SRR23650981
|
HR-TB
|
lineage4.9
|
None
|
SRR25207059
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR25207186
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887788
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887694
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800440
|
Sensitive
|
lineage3
|
None
|
SRR23961480
|
Other
|
La1.7.1
|
None
|
SRR23316621
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28119716
|
Other
|
lineage2.2.1
|
None
|
SRR28119803
|
Other
|
lineage2.2.1
|
None
|
SRR28044943
|
Sensitive
|
lineage3
|
None
|
SRR28046042
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046100
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800431
|
Sensitive
|
lineage3
|
None
|
SRR27069463
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207181
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR27069461
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28859813
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR25207060
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119793
|
Other
|
lineage2.2.1
|
None
|
SRR16915763
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21887760
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28119836
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR16915741
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28119794
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045550
|
Sensitive
|
lineage1.1.2;lineage4
|
None
|
SRR28046109
|
MDR-TB
|
lineage3
|
None
|
SRR25206919
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28046350
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR28045613
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28046170
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23562879
|
Other
|
La1.4
|
None
|
SRR29094376
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR25905991
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28119808
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119764
|
Other
|
lineage2.2.1
|
None
|
SRR25207049
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207311
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207314
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28046114
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23316588
|
HR-TB
|
lineage1.1.1
|
None
|
SRR23650982
|
HR-TB
|
lineage4.9
|
None
|
SRR23650984
|
HR-TB
|
lineage4.9
|
None
|
SRR16915749
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR25207312
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207037
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207058
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25905990
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21887708
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR23316625
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28045923
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207042
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045933
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23316634
|
HR-TB
|
lineage4.5
|
None
|
SRR23961466
|
Other
|
La1.2
|
None
|
SRR28046337
|
Other
|
lineage4.3.3
|
None
|
SRR23961460
|
Other
|
La1.7.1
|
None
|
SRR27241222
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045544
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044382
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28119770
|
Other
|
lineage2.2.1
|
None
|
SRR16915770
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915740
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR25207306
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23650986
|
Sensitive
|
lineage4.9
|
None
|
SRR25827782
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR25207038
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28044941
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR28858427
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207178
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25206918
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR20958116
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859785
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29093686
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23961456
|
Other
|
La1.7.1
|
None
|
SRR16915775
|
Other
|
lineage4.1.1.3
|
None
|
SRR21887720
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046353
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR28045508
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044331
|
MDR-TB
|
lineage3
|
None
|
SRR28044887
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868509
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28119755
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26800430
|
Other
|
lineage3
|
None
|
SRR26331636
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR23961411
|
Other
|
La1.7.1
|
None
|
SRR25827472
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR28044947
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28045753
|
Sensitive
|
lineage3
|
None
|
SRR28044879
|
Sensitive
|
lineage4.2.2
|
None
|
SRR28046048
|
Sensitive
|
lineage3
|
None
|
SRR28045601
|
Sensitive
|
lineage4.8
|
None
|
SRR16915708
|
Sensitive
|
lineage4.8
|
None
|
SRR16915726
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859956
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR23316594
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR23316587
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21887757
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207047
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045191
|
Sensitive
|
lineage3
|
None
|
SRR16915744
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21700828
|
HR-TB
|
lineage4.9
|
None
|
SRR21887709
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR16915757
|
HR-TB
|
lineage4
|
None
|
SRR25827438
|
XDR-TB
|
lineage4.8
|
None
|
SRR23316613
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316643
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119746
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23316607
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR25207064
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800474
|
Sensitive
|
lineage3
|
None
|
SRR28119837
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25207036
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827680
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1;lineage3
|
None
|
SRR27069438
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887722
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915777
|
Sensitive
|
lineage4.1.2.1;lineage4.3.2
|
None
|
SRR16915768
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27069367
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR23316604
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28119831
|
RR-TB
|
lineage4.4.2
|
None
|
SRR28044608
|
HR-TB
|
lineage3
|
None
|
SRR28045640
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045649
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28119741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800487
|
Sensitive
|
lineage4.8
|
None
|
SRR16915716
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR28045917
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28046043
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044338
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044388
|
Sensitive
|
lineage3.1
|
None
|
SRR21732135
|
Sensitive
|
lineage1.2.1.1
|
None
|
SRR16915773
|
Sensitive
|
lineage4.8
|
None
|
SRR26683339
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23961511
|
Other
|
La1.7.1
|
None
|
SRR16915753
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR16915717
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25207275
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR16915732
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR25628610
|
Sensitive
|
lineage4.4
|
None
|
SRR16915727
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25524714
|
Sensitive
|
lineage4.9
|
None
|
SRR21887742
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23961435
|
Other
|
La1.7.1
|
None
|
SRR25206917
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28119708
|
HR-TB
|
lineage2.2.1
|
None
|
SRR26800465
|
Sensitive
|
lineage3
|
None
|
SRR16915713
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR23316599
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28859703
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28860051
|
Other
|
lineage4.3.3
|
None
|
SRR28045569
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044869
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28045518
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069416
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR27069378
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28119729
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28858479
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR25628566
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR23961402
|
Other
|
La1.7.1
|
None
|
SRR25206908
|
MDR-TB
|
lineage4.5
|
None
|
SRR28044390
|
Sensitive
|
lineage3
|
None
|
SRR21887668
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887674
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827628
|
XDR-TB
|
lineage3
|
None
|
SRR26800459
|
Sensitive
|
lineage3
|
None
|
SRR25207308
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859656
|
Sensitive
|
lineage2.2.2
|
None
|
SRR25206913
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR26800452
|
Sensitive
|
lineage3
|
None
|
SRR23316631
|
Other
|
lineage2.2.1
|
None
|
SRR16915781
|
Other
|
lineage4.1.2.1
|
None
|
SRR28044897
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23316619
|
HR-TB
|
lineage1.1.3.3
|
None
|
SRR26331667
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206911
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800453
|
Sensitive
|
lineage3
|
None
|
SRR25206907
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119710
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119792
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316620
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28044359
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR28046171
|
Sensitive
|
lineage3
|
None
|
SRR28044336
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25628613
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28044343
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28045590
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045887
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28046347
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR25524697
|
Sensitive
|
lineage4.9
|
None
|
SRR28046101
|
Sensitive
|
lineage3
|
None
|
SRR22502075
|
Sensitive
|
lineage4.9
|
None
|
SRR28119747
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27241221
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27069391
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR27069457
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22251307
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR21887707
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887724
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887698
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887677
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887715
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887684
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23961454
|
Other
|
La1.7.1
|
None
|
SRR25827528
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR21887667
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207061
|
MDR-TB
|
lineage2.2.1;lineage4.2
|
None
|
SRR23562881
|
Other
|
La1.4
|
None
|
SRR16915729
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25206895
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16915765
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR25207039
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119824
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23961410
|
Other
|
La1.2
|
None
|
SRR23961397
|
Other
|
La1.7.1
|
None
|
SRR25628571
|
Sensitive
|
lineage4.5
|
None
|
SRR16915733
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915720
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958096
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28044592
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28044904
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28045653
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045916
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR27069397
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887666
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859762
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR23961472
|
Other
|
La1.7.1
|
None
|
SRR28859783
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868506
|
Sensitive
|
lineage3
|
None
|
SRR28119745
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25827368
|
XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR25524712
|
Sensitive
|
lineage4.9
|
None
|
SRR16915724
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26800447
|
Sensitive
|
lineage3
|
None
|
SRR25207180
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR16915778
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25628577
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915780
|
Sensitive
|
lineage4.1.1
|
None
|
SRR27069444
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207065
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR25207179
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28119845
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23316593
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28044902
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28045901
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859974
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28859787
|
Sensitive
|
lineage1.2.2
|
None
|
SRR28859795
|
HR-TB
|
La1.2.BCG
|
None
|
SRR28860116
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25207318
|
XDR-TB
|
lineage4.5
|
None
|
SRR21887673
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23961539
|
Other
|
La1.7.1
|
None
|
ERR4812109
|
Sensitive
|
lineage2.2.1
|
pe
|
SRR25827691
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915764
|
MDR-TB
|
lineage2.2.1;lineage4.3.4.2
|
None
|
SRR23316590
|
HR-TB
|
lineage1.1.3.3
|
None
|
SRR23316636
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28119768
|
Other
|
lineage2.2.1
|
None
|
SRR25207185
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119804
|
Other
|
lineage2.2.1
|
None
|
SRR25827297
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207035
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915774
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915752
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25524711
|
Sensitive
|
lineage4.9
|
None
|
SRR25207056
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR16915743
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23316614
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045643
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045989
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044915
|
Sensitive
|
lineage3
|
None
|
SRR28044961
|
Sensitive
|
lineage4.8
|
None
|
SRR27069388
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28860015
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR26800443
|
Other
|
lineage3
|
None
|
SRR16915782
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR22251639
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859804
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR16915762
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119773
|
Other
|
lineage2.2.1
|
None
|
SRR28044393
|
Sensitive
|
lineage4.6.2
|
None
|
SRR28045652
|
MDR-TB
|
lineage1.1.3.3
|
None
|
SRR28045521
|
Sensitive
|
lineage3
|
None
|
SRR23961507
|
Other
|
La1.7.1
|
None
|
SRR28044837
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28046308
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045552
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23961449
|
Other
|
La1.7.1
|
None
|
SRR28044358
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR16915704
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR26800471
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045563
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28351340
|
HR-TB
|
lineage3
|
None
|
SRR21887728
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915754
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915758
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28045558
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28046087
|
Sensitive
|
lineage1.1.2
|
None
|
SRR16915735
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915772
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915745
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28046138
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045502
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069401
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069396
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046123
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800491
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR25207041
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206891
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25905992
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR26800480
|
Sensitive
|
lineage3
|
None
|
SRR28859680
|
Sensitive
|
lineage3
|
None
|
SRR23961459
|
Other
|
La1.2
|
None
|
SRR28046173
|
Sensitive
|
lineage3
|
None
|
SRR28044876
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR28045945
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044383
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21887704
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069398
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR27069421
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28868510
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR25206910
|
XDR-TB
|
lineage4.5
|
None
|
SRR25524713
|
Sensitive
|
lineage4.9
|
None
|
SRR26936926
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25524717
|
Sensitive
|
lineage4.9
|
None
|
SRR28044916
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR21887717
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046104
|
Sensitive
|
lineage3
|
None
|
SRR28044360
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28119772
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR26800434
|
Sensitive
|
lineage3
|
None
|
SRR26800485
|
Other
|
lineage4.6.5
|
None
|
SRR25524715
|
Sensitive
|
lineage4.9
|
None
|
SRR25628608
|
Sensitive
|
lineage4.5
|
None
|
SRR26800446
|
Sensitive
|
lineage3
|
None
|
SRR26800488
|
Sensitive
|
lineage3
|
None
|
SRR28046182
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915761
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28044918
|
Sensitive
|
lineage3
|
None
|
SRR28045591
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25524716
|
Sensitive
|
lineage4.9
|
None
|
SRR28119776
|
Other
|
lineage2.2.1
|
None
|
SRR26442323
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25206914
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207310
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800475
|
Sensitive
|
lineage3
|
None
|
SRR25460165
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28045556
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23650983
|
HR-TB
|
lineage4.9
|
None
|
SRR28046184
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25206924
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28119769
|
Other
|
lineage2.2.1
|
None
|
SRR28045475
|
Sensitive
|
lineage1.1.2
|
None
|
SRR23316642
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069383
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069446
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069405
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069451
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206923
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23316628
|
HR-TB
|
lineage1.1.3.3
|
None
|
SRR23961455
|
Other
|
La1.7.1
|
None
|
SRR28119721
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16915705
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR23562880
|
Other
|
La1.4
|
None
|
SRR23961476
|
Other
|
La1.7.1
|
None
|
SRR25206922
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207034
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887787
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119835
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207304
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28045942
|
MDR-TB
|
lineage3
|
None
|
SRR28046093
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044615
|
Other
|
lineage3
|
None
|
SRR28045567
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28044337
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044373
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28044838
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR28044841
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28045433
|
Other
|
lineage3
|
None
|
SRR29094374
|
MDR-TB
|
lineage4.1.1.2
|
None
|
SRR23961521
|
Other
|
La1.2
|
None
|
SRR23961404
|
Other
|
La1.7.1
|
None
|
SRR16915750
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28045920
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR28046030
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069386
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25628592
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR26800463
|
Other
|
lineage4.6.5
|
None
|
SRR28044609
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28045939
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045994
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045689
|
Sensitive
|
lineage3
|
None
|
SRR28044369
|
Other
|
lineage4.3.3
|
None
|
SRR28045486
|
MDR-TB
|
lineage3
|
None
|
SRR25207048
|
MDR-TB
|
lineage4.5
|
None
|
SRR28119778
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28467057
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800455
|
HR-TB
|
lineage3
|
None
|
SRR23961544
|
Other
|
La1.2
|
None
|
SRR23316629
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28119799
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23961469
|
Other
|
La1.7.1
|
None
|
SRR28119709
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119780
|
Other
|
lineage2.2.1
|
None
|
SRR28044352
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044599
|
Sensitive
|
lineage3
|
None
|
SRR28045682
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25207125
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28045599
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069422
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069460
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069404
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23961512
|
Other
|
La1.7.1
|
None
|
SRR26800484
|
Sensitive
|
lineage3
|
None
|
SRR28859677
|
Sensitive
|
lineage3.1.2
|
None
|
SRR20958089
|
Sensitive
|
lineage4.3.3
|
None
|
SRR25827784
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR28046166
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR16915783
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21887662
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915718
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21887655
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25524727
|
Sensitive
|
lineage4.9
|
None
|
SRR23316615
|
HR-TB
|
lineage4.5
|
None
|
SRR28046084
|
Sensitive
|
lineage3
|
None
|
SRR28119841
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR27069365
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28868503
|
Other
|
lineage1.1.2
|
None
|
SRR29093444
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR25905994
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915706
|
Sensitive
|
lineage4
|
None
|
SRR16915755
|
Sensitive
|
lineage4.3.3
|
None
|
SRR22251941
|
Sensitive
|
lineage3
|
None
|
SRR26800432
|
Sensitive
|
lineage3
|
None
|
SRR23316633
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21887664
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887719
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045904
|
Other
|
lineage3.1.2
|
None
|
SRR23961527
|
Other
|
La1.7.1
|
None
|
SRR28044371
|
Sensitive
|
lineage3
|
None
|
SRR28046320
|
Other
|
lineage1.1.3.3
|
None
|
SRR22251645
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR27069464
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045661
|
MDR-TB
|
lineage3.1.2.1
|
None
|
SRR28046078
|
Other
|
La1.7;lineage3
|
None
|
SRR28045507
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28046139
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR28044607
|
Sensitive
|
lineage3
|
None
|
SRR28045555
|
MDR-TB
|
lineage3.1
|
None
|
SRR28044614
|
Sensitive
|
lineage3
|
None
|
SRR28046092
|
Sensitive
|
lineage1.1.3
|
None
|
SRR23316609
|
HR-TB
|
lineage1.2.1.2
|
None
|
SRR28046116
|
Sensitive
|
lineage3.1
|
None
|
SRR28044884
|
Sensitive
|
lineage3
|
None
|
SRR28045598
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045474
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25206906
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207050
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044881
|
HR-TB
|
lineage3
|
None
|
SRR28045947
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045596
|
Sensitive
|
lineage3
|
None
|
SRR28045928
|
HR-TB
|
lineage3.1.2.1
|
None
|
SRR25207272
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045663
|
Other
|
lineage1.1.2
|
None
|
SRR28045934
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28044349
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28044378
|
Sensitive
|
lineage3
|
None
|
SRR28045500
|
HR-TB
|
lineage3
|
None
|
SRR28045940
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046338
|
Sensitive
|
lineage3
|
None
|
SRR28119762
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28044616
|
Sensitive
|
lineage3
|
None
|
SRR28045525
|
Sensitive
|
lineage3
|
None
|
SRR27069380
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069400
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045545
|
HR-TB
|
lineage4.9
|
None
|
SRR28045645
|
Other
|
lineage2.2.1
|
None
|
SRR28046071
|
HR-TB
|
lineage3
|
None
|
SRR28044379
|
Sensitive
|
lineage3
|
None
|
SRR28046183
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045835
|
Other
|
lineage3
|
None
|
SRR28045895
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25207066
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046112
|
Sensitive
|
lineage4.8
|
None
|
SRR27069465
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR28860054
|
Sensitive
|
lineage3
|
None
|
SRR28859913
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859772
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28119800
|
Other
|
lineage2.2.1
|
None
|
SRR20958090
|
Sensitive
|
lineage4.8
|
None
|
SRR20958154
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR23961464
|
Other
|
La1.7.1
|
None
|
SRR23316638
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR28119767
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28046334
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069411
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27069393
|
MDR-TB
|
lineage4.5
|
None
|
SRR27450303
|
Sensitive
|
lineage3
|
None
|
SRR28119719
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119785
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915723
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27069373
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23316630
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28859613
|
Other
|
lineage4.3.3
|
None
|
SRR28044906
|
Sensitive
|
lineage3
|
None
|
SRR28045417
|
Sensitive
|
lineage3
|
None
|
SRR25628569
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119810
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827568
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26112192
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR25207054
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23650985
|
Sensitive
|
lineage4.9
|
None
|
SRR21887735
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800445
|
Sensitive
|
lineage3
|
None
|
SRR28044899
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28045592
|
Sensitive
|
lineage1.1.3.2
|
None
|
SRR28046178
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28046185
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR25628568
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR16915747
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21887683
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR23316618
|
Other
|
lineage2.2.1
|
None
|
SRR28119783
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16295802
|
Other
|
lineage2.2.1
|
None
|
SRR25207067
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25524726
|
Sensitive
|
lineage4.9
|
None
|
SRR28119771
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26800441
|
Sensitive
|
lineage3
|
None
|
SRR28045536
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR28044370
|
HR-TB
|
lineage3
|
None
|
SRR28044611
|
MDR-TB
|
lineage3.1.2.1
|
None
|
SRR28045703
|
Sensitive
|
lineage3
|
None
|
SRR28046106
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28045646
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25206915
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207188
|
Sensitive
|
lineage4
|
None
|
SRR23961473
|
Other
|
La1.7.1
|
None
|
SRR25207321
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20958136
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27069425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21733018
|
Sensitive
|
lineage1.2.2.1
|
None
|
SRR25207271
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887678
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887706
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR23316639
|
HR-TB
|
lineage4.4.2
|
None
|
SRR28119750
|
RR-TB
|
lineage4.4.2
|
None
|
SRR25827478
|
MDR-TB
|
lineage4.8
|
None
|
SRR28119816
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25827670
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915709
|
Sensitive
|
lineage4.1.1
|
None
|
SRR25827863
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR25628560
|
HR-TB
|
lineage4.5
|
None
|
SRR27450235
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR26800477
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR26800436
|
Sensitive
|
lineage3.1.1
|
None
|
SRR21887754
|
MDR-TB
|
lineage4.5
|
None
|
SRR25207044
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119714
|
Other
|
lineage2.2.1
|
None
|
SRR16915711
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28044347
|
XDR-TB
|
lineage3
|
None
|
SRR28044350
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28044368
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR25207045
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR25207278
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207053
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045371
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28046319
|
Other
|
lineage1.1.2
|
None
|
SRR28044354
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28045593
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR26800437
|
Other
|
lineage3
|
None
|
SRR28045860
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28046181
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827490
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR23316623
|
Sensitive
|
lineage4.4.2
|
None
|
SRR25524696
|
Sensitive
|
lineage4.9
|
None
|
SRR26800481
|
Sensitive
|
lineage3
|
None
|
SRR16915769
|
Sensitive
|
lineage4.8
|
None
|
SRR28467040
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28044596
|
Sensitive
|
lineage4.8
|
None
|
SRR28045639
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28045745
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859959
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27069450
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28858472
|
Sensitive
|
lineage4.3.2
|
None
|
SRR16915779
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28045884
|
Sensitive
|
lineage3
|
None
|
SRR28045899
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044381
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28044362
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR23961534
|
Other
|
La1.2
|
None
|
SRR28046144
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044365
|
Other
|
lineage3
|
None
|
SRR28044339
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR28046072
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28046099
|
Sensitive
|
lineage1.1.3.3
|
None
|
SRR28046103
|
Other
|
lineage1.1.3
|
None
|
SRR28045588
|
Sensitive
|
lineage3
|
None
|
SRR28045655
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR28045476
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069414
|
MDR-TB
|
lineage4.5
|
None
|
SRR28046070
|
Sensitive
|
lineage3
|
None
|
SRR28045416
|
Sensitive
|
lineage1.1.3.2
|
None
|
SRR28044366
|
Other
|
lineage3
|
None
|
SRR28044877
|
Sensitive
|
lineage3
|
None
|
SRR27069443
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119744
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28045547
|
HR-TB
|
lineage3
|
None
|
SRR28467020
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28045691
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28045551
|
HR-TB
|
lineage4.4
|
None
|
SRR28044910
|
Sensitive
|
lineage3
|
None
|
SRR28046120
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069374
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046161
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044888
|
Other
|
lineage3.1.2.1
|
None
|
SRR28044363
|
Other
|
lineage1.1.2
|
None
|
SRR27069408
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069448
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR27069407
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045859
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28467061
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23961484
|
Other
|
La1.2
|
None
|
SRR28046163
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28045660
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28045921
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28046176
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28044903
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28045479
|
Sensitive
|
lineage3
|
None
|
SRR28119758
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045931
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR25827446
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28119712
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045926
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044845
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28119781
|
Other
|
lineage2.2.1
|
None
|
SRR28046317
|
Sensitive
|
lineage1.1.3.3
|
None
|
SRR27069449
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28044880
|
Sensitive
|
lineage3
|
None
|
SRR28046329
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27069387
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28046330
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28044892
|
MDR-TB
|
lineage1.1.2;lineage4.1.1.3
|
None
|
SRR28044356
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044605
|
Sensitive
|
lineage3
|
None
|
SRR28044870
|
Other
|
lineage3
|
None
|
SRR28045651
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044330
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28045746
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045478
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR28044598
|
Sensitive
|
lineage4.4
|
None
|
SRR28046088
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28046306
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044353
|
HR-TB
|
lineage4.8
|
None
|
SRR28465663
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28045677
|
HR-TB
|
lineage3
|
None
|
SRR27069431
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044940
|
HR-TB
|
lineage1.1.2
|
None
|
SRR23961471
|
Other
|
La1.7.1
|
None
|
SRR28046082
|
Sensitive
|
lineage1.1.3.3
|
None
|
SRR28044960
|
Sensitive
|
lineage4.9
|
None
|
SRR28119743
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28046140
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045883
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045557
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119757
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28044847
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28045434
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28044866
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045659
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28045742
|
Sensitive
|
lineage3
|
None
|
SRR27069418
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28045932
|
XDR-TB
|
lineage1.2.2.2
|
None
|
SRR27069439
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119713
|
Other
|
lineage2.2.1
|
None
|
SRR28045422
|
Other
|
lineage1.1.2
|
None
|
SRR28044921
|
Sensitive
|
lineage3
|
None
|
SRR28044914
|
Sensitive
|
lineage3.1.3
|
None
|
SRR28860124
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28046097
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28045929
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119775
|
Other
|
lineage2.2.1.2
|
None
|
SRR28044597
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28046095
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28046124
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046326
|
MDR-TB
|
lineage1.1.3.3
|
None
|
SRR28868892
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28119766
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119839
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR16915748
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28046034
|
Sensitive
|
lineage3.1.2
|
None
|
SRR27069375
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069459
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859792
|
Sensitive
|
lineage4.1.1
|
None
|
SRR16915715
|
Sensitive
|
lineage4
|
None
|
SRR16915756
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR21887718
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21887765
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25628581
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28026768
|
Sensitive
|
lineage3
|
None
|
SRR28044893
|
MDR-TB
|
lineage4.8
|
None
|
SRR28044907
|
Sensitive
|
lineage3
|
None
|
SRR28859961
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28860122
|
Sensitive
|
lineage4.8
|
None
|
SRR25827673
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119749
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28859763
|
Sensitive
|
lineage4.5
|
None
|
SRR29094366
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207273
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119754
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045428
|
Sensitive
|
lineage3
|
None
|
SRR28045421
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045511
|
Other
|
lineage2.2.1
|
None
|
SRR28045644
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28045824
|
Sensitive
|
lineage1.1.3.3
|
None
|
SRR27069402
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044389
|
Sensitive
|
lineage3
|
None
|
SRR21887713
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044896
|
MDR-TB
|
lineage3
|
None
|
SRR28045948
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23961474
|
Other
|
La1.2
|
None
|
SRR28351260
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR27069428
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044920
|
Sensitive
|
lineage3
|
None
|
SRR28045861
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069447
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044380
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045679
|
HR-TB
|
lineage3.1.2
|
None
|
SRR28046321
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046315
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044391
|
Sensitive
|
lineage3
|
None
|
SRR28044419
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28044332
|
HR-TB
|
lineage3
|
None
|
SRR28044956
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR28044372
|
Sensitive
|
lineage3
|
None
|
SRR28044834
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR23316617
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316635
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27069437
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069430
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28046129
|
RR-TB
|
lineage1.1.3.3
|
None
|
SRR28046037
|
Other
|
lineage1.1.2
|
None
|
SRR28046111
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044908
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28046069
|
Sensitive
|
lineage3
|
None
|
SRR28045483
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28046157
|
Other
|
lineage3.1.2.1
|
None
|
SRR28045871
|
Sensitive
|
lineage3
|
None
|
SRR28046110
|
MDR-TB
|
lineage3
|
None
|
SRR28045540
|
MDR-TB
|
lineage3
|
None
|
SRR27069392
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045637
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28046068
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27069377
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28046177
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR28044913
|
HR-TB
|
lineage3.1.2
|
None
|
SRR28044345
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045654
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827547
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR28044890
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR23961485
|
Other
|
La1.7.1
|
None
|
SRR28868795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915759
|
Sensitive
|
lineage4.8
|
None
|
SRR25628558
|
Sensitive
|
lineage2.2.2
|
None
|
SRR16915737
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR26800472
|
Other
|
lineage3
|
None
|
SRR25206921
|
MDR-TB
|
lineage4.5
|
None
|
SRR25207057
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207069
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR26800461
|
Other
|
lineage3
|
None
|
SRR27450073
|
Sensitive
|
lineage3
|
None
|
SRR25827826
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21733317
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26800457
|
Sensitive
|
lineage3
|
None
|
SRR25827620
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28119739
|
Other
|
lineage2.2.1
|
None
|
SRR23961400
|
Other
|
La1.7.1
|
None
|
SRR28119774
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045662
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28046156
|
Sensitive
|
lineage3.1.2
|
None
|
SRR27069412
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27069419
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915739
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827756
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046168
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR27069462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28044901
|
HR-TB
|
lineage3
|
None
|
SRR28045927
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR27069406
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR28045614
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28044348
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28045566
|
HR-TB
|
lineage3.1.2.1
|
None
|
SRR28045482
|
Sensitive
|
La1.1;lineage1.2.2.2
|
None
|
SRR28045543
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800482
|
Sensitive
|
lineage3
|
None
|
SRR27069368
|
MDR-TB
|
lineage4.5
|
None
|
SRR28045944
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28119737
|
Other
|
lineage2.2.1
|
None
|
SRR23316598
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316603
|
Other
|
lineage2.2.1
|
None
|
SRR23961420
|
Other
|
La1.2
|
None
|
SRR23961467
|
Other
|
La1.7.1
|
None
|
SRR28046344
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28046349
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR28044333
|
RR-TB
|
lineage1.1.2
|
None
|
SRR28044912
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28044361
|
HR-TB
|
lineage1.1.3.1
|
None
|
SRR23961497
|
Other
|
La1.7.1
|
None
|
SRR23961447
|
Other
|
La1.2
|
None
|
SRR28045924
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28046126
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28045995
|
Sensitive
|
lineage3
|
None
|
SRR28045546
|
MDR-TB
|
lineage3.1.2.1
|
None
|
SRR28045891
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28046339
|
Other
|
lineage1.1.3.3
|
None
|
SRR28046341
|
Sensitive
|
lineage3
|
None
|
SRR28045857
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28045936
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045925
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045554
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28045687
|
Sensitive
|
lineage3
|
None
|
SRR21887711
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25628593
|
MDR-TB
|
lineage4.5
|
None
|
SRR22251902
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26683338
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119788
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119720
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044886
|
HR-TB
|
lineage1.1.2
|
None
|
SRR28119820
|
HR-TB
|
lineage2.2.1
|
None
|
SRR20958076
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR23316589
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR25207068
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28045600
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28119760
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27241220
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206916
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|