ERR1950012
|
Sensitive
|
lineage4.8
|
None
|
SRR23082544
|
Sensitive
|
lineage4.9
|
None
|
ERR2229655
|
Other
|
lineage4.8
|
None
|
ERR2229311
|
Sensitive
|
lineage4.8
|
None
|
ERR2510802
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4829208
|
RR-TB
|
lineage4.8
|
None
|
ERR4827461
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2843451
|
HR-TB
|
lineage1.1.1
|
None
|
ERR4828357
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4828388
|
HR-TB
|
lineage1.1.1
|
None
|
ERR4812109
|
Sensitive
|
lineage2.2.1
|
pe
|
SRR6785365
|
Other
|
lineage2.2.1
|
None
|
SRR7131123
|
Other
|
lineage4.8
|
None
|
SRR9224908
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR9738556
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR8923705
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR10748310
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748287
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748321
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748293
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR10969156
|
Sensitive
|
lineage2.2.1
|
None
|
ERR10969119
|
Sensitive
|
lineage4.8
|
None
|
ERR10969225
|
Sensitive
|
lineage4.3.2
|
None
|
ERR10969210
|
Sensitive
|
lineage4.2.2
|
None
|
ERR10969200
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4553840
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR11044258
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR11049443
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3838819
|
Sensitive
|
lineage4.9
|
None
|
SRR16915708
|
Sensitive
|
lineage4.8
|
None
|
ERR4676901
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR16915706
|
Sensitive
|
lineage4
|
None
|
SRR16915732
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR16915714
|
Sensitive
|
lineage4.3.2
|
None
|
SRR16915719
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915710
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915715
|
Sensitive
|
lineage4
|
None
|
SRR16915723
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915721
|
Sensitive
|
lineage4.1.2
|
None
|
SRR16915727
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915759
|
Sensitive
|
lineage4.8
|
None
|
SRR16915748
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16915740
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR16915749
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16915742
|
Sensitive
|
lineage4.7
|
None
|
SRR16915756
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR16915765
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16915774
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915762
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915769
|
Sensitive
|
lineage4.8
|
None
|
SRR16915777
|
Sensitive
|
lineage4.3.2;lineage4.1.2.1
|
None
|
SRR16915782
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4812252
|
HR-TB
|
lineage4.3.3
|
None
|
ERR6139861
|
Other
|
La1.8.2
|
None
|
ERR4812270
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR4812280
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812316
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915779
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915778
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR11067627
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR6140656
|
Other
|
La1.8.2
|
None
|
SRR16915712
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915713
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16915704
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915716
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR16915705
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR16915724
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915718
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915711
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915750
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915753
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR16915770
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915781
|
Other
|
lineage4.1.2.1
|
None
|
SRR16915773
|
Sensitive
|
lineage4.8
|
None
|
SRR16915729
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915752
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915755
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915761
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915767
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915775
|
Other
|
lineage4.1.1.3
|
None
|
SRR16915783
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915747
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958089
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915751
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915739
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915709
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21732135
|
Sensitive
|
lineage1.2.1.1
|
None
|
SRR16915720
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915717
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915726
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915733
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915745
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16915735
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915741
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915737
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR16915757
|
HR-TB
|
lineage4
|
None
|
SRR16915743
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915754
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915744
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915758
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915763
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16915764
|
MDR-TB
|
lineage4.3.4.2;lineage2.2.1
|
None
|
SRR16915768
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915766
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915776
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16915772
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27241222
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915780
|
Sensitive
|
lineage4.1.1
|
None
|
SRR26936926
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27241221
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733322
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR27241220
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7764342
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11049973
|
Sensitive
|
lineage4.8
|
None
|
ERR7764363
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7764357
|
Other
|
lineage4.3.4.2
|
None
|
ERR7764353
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR7764409
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR7764394
|
Other
|
lineage4.8
|
None
|
SRR22251307
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR22251645
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR22251902
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR23650986
|
Sensitive
|
lineage4.9
|
None
|
SRR20958090
|
Sensitive
|
lineage4.8
|
None
|
SRR23650985
|
Sensitive
|
lineage4.9
|
None
|
SRR21733018
|
Sensitive
|
lineage1.2.2.1
|
None
|
SRR20958116
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR20958154
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR20958136
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11050115
|
Sensitive
|
lineage4.8
|
None
|
SRR22251639
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11050113
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11050103
|
Sensitive
|
lineage4.4.2
|
None
|
ERR11050204
|
Sensitive
|
lineage4
|
None
|
ERR11050118
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR9811807
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11050209
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11050406
|
HR-TB
|
lineage4.5
|
None
|
ERR11050219
|
Sensitive
|
lineage4.5
|
None
|
ERR11050208
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR11349207
|
RR-TB
|
lineage2.2.1
|
None
|
ERR11050304
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11050377
|
Sensitive
|
lineage3
|
None
|
SRR13399335
|
Other
|
La1.2.BCG
|
None
|
ERR11050520
|
HR-TB
|
lineage4.2.1.1
|
None
|
SRR13399336
|
Other
|
La1.2.BCG
|
None
|
SRR14801855
|
HR-TB
|
lineage4.3.3
|
None
|
SRR14782711
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR14801551
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR14782602
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801395
|
Sensitive
|
lineage4.8
|
None
|
SRR16157105
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11050659
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR11050675
|
Sensitive
|
lineage3
|
None
|
SRR16156269
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR16157094
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR16295802
|
Other
|
lineage2.2.1
|
None
|
SRR16295825
|
Other
|
lineage2.2.1
|
None
|
ERR11050702
|
Sensitive
|
lineage3
|
None
|
ERR11050698
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR11050707
|
Sensitive
|
lineage3
|
None
|
ERR11050751
|
Sensitive
|
lineage4.5
|
None
|
ERR11050725
|
Sensitive
|
lineage4.8
|
None
|
SRR18714950
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR18714774
|
MDR-TB
|
lineage1.2.1.2
|
None
|
ERR11050765
|
Sensitive
|
lineage6.3.1
|
None
|
SRR18714931
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827690
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11050764
|
Sensitive
|
lineage3.1.1
|
None
|
SRR18715065
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR18714961
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715085
|
Sensitive
|
lineage4.8
|
None
|
SRR18715075
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715149
|
Sensitive
|
lineage2.2.1
|
None
|
SRR18715107
|
Sensitive
|
lineage2.2.1
|
None
|
SRR18715142
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11050773
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR18715189
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18715159
|
Sensitive
|
lineage4.8
|
None
|
SRR18715190
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715194
|
Sensitive
|
lineage4.3.3
|
None
|
SRR18715210
|
Sensitive
|
lineage4.3.3
|
None
|
SRR18715366
|
Sensitive
|
lineage4.3.3
|
None
|
SRR18715311
|
Sensitive
|
lineage4.8
|
None
|
SRR18715294
|
Sensitive
|
lineage4.8
|
None
|
SRR18715300
|
Other
|
lineage2.2.1
|
None
|
SRR18715397
|
Sensitive
|
lineage4.3.3
|
None
|
SRR18715362
|
Sensitive
|
lineage2.2.1
|
None
|
SRR18715363
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715394
|
Sensitive
|
lineage4
|
None
|
SRR18715369
|
Other
|
lineage2.2.1
|
None
|
SRR18715372
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715396
|
Sensitive
|
lineage2.2.1
|
None
|
SRR18715399
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11050791
|
Sensitive
|
lineage4.1.2
|
None
|
SRR18715454
|
Sensitive
|
lineage4.2.1.1
|
None
|
SRR18715491
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11050783
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR11050784
|
Sensitive
|
lineage1.1.1
|
None
|
ERR11050782
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25206907
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11050815
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827691
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11050795
|
Sensitive
|
lineage4.8
|
None
|
ERR11050802
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR11050816
|
Other
|
La1.7.1
|
None
|
ERR11050828
|
Sensitive
|
lineage3.1.1
|
None
|
SRR25206891
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206916
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206914
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25206918
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207035
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207037
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207052
|
MDR-TB
|
lineage2.2.2;lineage2.2.1
|
None
|
SRR25207056
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR25207058
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206917
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR25206922
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207034
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207047
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207060
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207178
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827826
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25207067
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207181
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207304
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR25207278
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207273
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207318
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR25207310
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207321
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22528522
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR25524696
|
Sensitive
|
lineage4.9
|
None
|
SRR25524712
|
Sensitive
|
lineage4.9
|
None
|
SRR25524726
|
Sensitive
|
lineage4.9
|
None
|
SRR25827297
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11050914
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11050918
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827438
|
XDR-TB
|
lineage4.8
|
None
|
SRR25827628
|
XDR-TB
|
lineage3
|
None
|
SRR25905991
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25905994
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11050920
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR11050928
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11050934
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR23861849
|
Sensitive
|
lineage2.2.1
|
None
|
SRR22528542
|
MDR-TB
|
lineage4.4.1.1;lineage2.2.1
|
None
|
SRR22528577
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11068717
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR11068830
|
Sensitive
|
lineage2.2.1
|
None
|
SRR22528554
|
Sensitive
|
lineage4.3.2
|
None
|
ERR11068489
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR11068743
|
Other
|
lineage2.2.1
|
None
|
SRR23562878
|
Other
|
La1.4
|
None
|
SRR23861907
|
MDR-TB
|
lineage4.8
|
None
|
SRR23861977
|
Sensitive
|
lineage4.8
|
None
|
SRR23862013
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23562879
|
Other
|
La1.4
|
None
|
SRR23562880
|
Other
|
La1.4
|
None
|
SRR23562881
|
Other
|
La1.4
|
None
|
SRR23938628
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23861924
|
Sensitive
|
lineage4.8
|
None
|
SRR21887673
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23938656
|
Other
|
lineage2.2.1
|
None
|
SRR21887667
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887670
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887722
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887723
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887698
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887724
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887705
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887666
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887662
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887735
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887773
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887772
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887668
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887677
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887664
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887704
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887683
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR21887678
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887715
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887720
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887769
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887754
|
MDR-TB
|
lineage4.5
|
None
|
SRR21887788
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887655
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887684
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887719
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887731
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887742
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887781
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887784
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887787
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887674
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887680
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887706
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR21887694
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887711
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887708
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887713
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887718
|
RR-TB
|
lineage2.2.1
|
None
|
SRR21887717
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887728
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887709
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR21887707
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887765
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887757
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887776
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887761
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887760
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887770
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23316589
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR6650365
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23316588
|
HR-TB
|
lineage1.1.1
|
None
|
SRR23316620
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316613
|
HR-TB
|
lineage2.2.1
|
None
|
SRR22251941
|
Sensitive
|
lineage3
|
None
|
SRR23316607
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR23316631
|
Other
|
lineage2.2.1
|
None
|
SRR23650984
|
HR-TB
|
lineage4.9
|
None
|
SRR23316632
|
HR-TB
|
lineage2.2.1;lineage1.1.1
|
None
|
SRR23650982
|
HR-TB
|
lineage4.9
|
None
|
SRR23650983
|
HR-TB
|
lineage4.9
|
None
|
SRR23316642
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20958096
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958076
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR23316639
|
HR-TB
|
lineage4.4.2
|
None
|
SRR23316599
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR23650981
|
HR-TB
|
lineage4.9
|
None
|
SRR23316594
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR23316609
|
HR-TB
|
lineage1.2.1.2
|
None
|
SRR23316604
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316605
|
Sensitive
|
lineage1.1.1
|
None
|
SRR23316612
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316619
|
HR-TB
|
lineage1.1.3.3
|
None
|
SRR23316617
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316618
|
Other
|
lineage2.2.1
|
None
|
SRR23316625
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733317
|
Sensitive
|
lineage2.2.1
|
None
|
SRR23316628
|
HR-TB
|
lineage1.1.3.3
|
None
|
SRR23316630
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR23316638
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR23316643
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23316629
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316633
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23316635
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25524711
|
Sensitive
|
lineage4.9
|
None
|
SRR26800470
|
Sensitive
|
lineage3
|
None
|
SRR25524715
|
Sensitive
|
lineage4.9
|
None
|
SRR25524717
|
Sensitive
|
lineage4.9
|
None
|
SRR26800432
|
Sensitive
|
lineage3
|
None
|
SRR26442323
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26800430
|
Other
|
lineage3
|
None
|
SRR26800455
|
HR-TB
|
lineage3
|
None
|
SRR26800440
|
Sensitive
|
lineage3
|
None
|
SRR26800445
|
Sensitive
|
lineage3
|
None
|
SRR26800463
|
Other
|
lineage4.6.5
|
None
|
SRR26800471
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26800465
|
Sensitive
|
lineage3
|
None
|
SRR26800475
|
Sensitive
|
lineage3
|
None
|
SRR26800481
|
Sensitive
|
lineage3
|
None
|
SRR25207039
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800484
|
Sensitive
|
lineage3
|
None
|
SRR26800487
|
Sensitive
|
lineage4.8
|
None
|
SRR25206895
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206913
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR25206924
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR27450303
|
Sensitive
|
lineage3
|
None
|
SRR26800477
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR26683339
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827568
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206906
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206910
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR25206923
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450235
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR25207044
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207042
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207049
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207045
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR25207059
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR25207050
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207068
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207055
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207125
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207186
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207180
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR26800434
|
Sensitive
|
lineage3
|
None
|
SRR26331636
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR25207308
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800436
|
Sensitive
|
lineage3.1.1
|
None
|
SRR26800457
|
Sensitive
|
lineage3
|
None
|
SRR26800437
|
Other
|
lineage3
|
None
|
SRR26800447
|
Sensitive
|
lineage3
|
None
|
SRR26800459
|
Sensitive
|
lineage3
|
None
|
SRR26800452
|
Sensitive
|
lineage3
|
None
|
SRR26800472
|
Other
|
lineage3
|
None
|
SRR26683338
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800468
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25206915
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26800485
|
Other
|
lineage4.6.5
|
None
|
SRR25206908
|
MDR-TB
|
lineage4.5
|
None
|
SRR25206911
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26800482
|
Sensitive
|
lineage3
|
None
|
SRR25460165
|
Sensitive
|
lineage4.3.3
|
None
|
SRR22251328
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26331667
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206912
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25206919
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206921
|
MDR-TB
|
lineage4.5
|
None
|
SRR25207036
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207038
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207053
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207054
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207057
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207048
|
MDR-TB
|
lineage4.5
|
None
|
SRR25207061
|
MDR-TB
|
lineage4.2;lineage2.2.1
|
None
|
SRR25207069
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207064
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207066
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207179
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207185
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207188
|
Sensitive
|
lineage4
|
None
|
SRR25207305
|
MDR-TB
|
lineage4.5
|
None
|
SRR25207314
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207065
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR25207271
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207272
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207275
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207306
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207311
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207312
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR23316623
|
Sensitive
|
lineage4.4.2
|
None
|
SRR22502075
|
Sensitive
|
lineage4.9
|
None
|
SRR25460166
|
Sensitive
|
lineage4.3.3
|
None
|
SRR25524697
|
Sensitive
|
lineage4.9
|
None
|
SRR25524713
|
Sensitive
|
lineage4.9
|
None
|
SRR25524714
|
Sensitive
|
lineage4.9
|
None
|
SRR25524716
|
Sensitive
|
lineage4.9
|
None
|
SRR25524727
|
Sensitive
|
lineage4.9
|
None
|
SRR23316587
|
HR-TB
|
lineage2.2.1
|
None
|
SRR23961411
|
Other
|
La1.7.1
|
None
|
SRR23961454
|
Other
|
La1.7.1
|
None
|
SRR23961435
|
Other
|
La1.7.1
|
None
|
SRR23961396
|
Other
|
La1.2
|
None
|
SRR23961456
|
Other
|
La1.7.1
|
None
|
SRR23961485
|
Other
|
La1.7.1
|
None
|
SRR23961464
|
Other
|
La1.7.1
|
None
|
SRR23961460
|
Other
|
La1.7.1
|
None
|
SRR21700828
|
HR-TB
|
lineage4.9
|
None
|
SRR23961544
|
Other
|
La1.2
|
None
|
SRR23961497
|
Other
|
La1.7.1
|
None
|
SRR23961539
|
Other
|
La1.7.1
|
None
|
SRR23961404
|
Other
|
La1.7.1
|
None
|
SRR23961397
|
Other
|
La1.7.1
|
None
|
SRR23961410
|
Other
|
La1.2
|
None
|
SRR23961449
|
Other
|
La1.7.1
|
None
|
SRR23961473
|
Other
|
La1.7.1
|
None
|
SRR23961472
|
Other
|
La1.7.1
|
None
|
SRR23961447
|
Other
|
La1.2
|
None
|
SRR23961502
|
Other
|
La1.7.1
|
None
|
SRR23961459
|
Other
|
La1.2
|
None
|
SRR23961455
|
Other
|
La1.7.1
|
None
|
SRR23961476
|
Other
|
La1.7.1
|
None
|
SRR23961480
|
Other
|
La1.7.1
|
None
|
SRR25827368
|
XDR-TB
|
lineage4.1.2.1;lineage2.2.1
|
None
|
SRR23961511
|
Other
|
La1.7.1
|
None
|
SRR23961522
|
Other
|
La1.7.1
|
None
|
SRR23961521
|
Other
|
La1.2
|
None
|
SRR23961512
|
Other
|
La1.7.1
|
None
|
SRR23961613
|
Other
|
La1.2
|
None
|
SRR25827670
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25827478
|
MDR-TB
|
lineage4.8
|
None
|
SRR25827680
|
Pre-XDR-TB
|
lineage3;lineage2.2.1;lineage1.2.2.2
|
None
|
SRR25827673
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827784
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR26442319
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25827782
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR26800443
|
Other
|
lineage3
|
None
|
SRR26800431
|
Sensitive
|
lineage3
|
None
|
SRR26442320
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26800441
|
Sensitive
|
lineage3
|
None
|
SRR26800446
|
Sensitive
|
lineage3
|
None
|
SRR26800453
|
Sensitive
|
lineage3
|
None
|
SRR26800474
|
Sensitive
|
lineage3
|
None
|
SRR26800461
|
Sensitive
|
lineage3
|
None
|
SRR26800483
|
Sensitive
|
lineage4.8
|
None
|
SRR26800488
|
Sensitive
|
lineage3
|
None
|
SRR26800491
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR26800480
|
Sensitive
|
lineage3
|
None
|
SRR28119708
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27450073
|
Sensitive
|
lineage3
|
None
|
SRR28119714
|
Other
|
lineage2.2.1
|
None
|
SRR28119719
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28119729
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119755
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119766
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119721
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119745
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28119746
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119747
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119750
|
RR-TB
|
lineage4.4.2
|
None
|
SRR28119768
|
Other
|
lineage2.2.1
|
None
|
SRR28119760
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119769
|
Other
|
lineage2.2.1
|
None
|
SRR28119710
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119770
|
Other
|
lineage2.2.1
|
None
|
SRR28119772
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28119785
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119771
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119776
|
Other
|
lineage2.2.1
|
None
|
SRR28119783
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119778
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28119793
|
Other
|
lineage2.2.1
|
None
|
SRR28119808
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119800
|
Other
|
lineage2.2.1
|
None
|
SRR28119804
|
Other
|
lineage2.2.1
|
None
|
SRR28119816
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28119810
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119820
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28119835
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119841
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28119840
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28119836
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28119839
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28119832
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR25827472
|
Pre-XDR-TB
|
lineage3;lineage2.2.1
|
None
|
SRR28119824
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25207041
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827490
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR25827620
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827528
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827547
|
XDR-TB
|
lineage3.1.2;lineage2.2.1
|
None
|
ERR4813498
|
Other
|
lineage4.1.1;lineage2.2.1
|
None
|
ERR4813524
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4813050
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813339
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813516
|
Sensitive
|
lineage4
|
None
|