lineage | Count |
---|---|
lineage2.2.1 | 87 |
lineage1.1.2 | 1 |
lineage1.2.2.2 | 2 |
lineage4.4.1.1;lineage2.2.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.1.1 | 3 |
lineage4.3.2 | 3 |
lineage4.3.3 | 14 |
lineage4.3.4.2.1 | 1 |
lineage4.8 | 21 |
lineage4.1.2.1 | 9 |
La1.4 | 4 |
lineage2.2.2 | 3 |
lineage4.5 | 4 |
lineage4.1.2 | 3 |
lineage4.1.1;lineage2.2.1 | 1 |
lineage4 | 3 |
lineage4.3.4.2 | 8 |
lineage4.9 | 2 |
lineage1.1.1 | 3 |
lineage4.1.1.3 | 1 |
lineage4.3.4.1 | 6 |
lineage4.2.2 | 1 |
lineage3 | 6 |
La1.8.2 | 2 |
lineage4.4.2 | 1 |
La1.2.BCG | 2 |
lineage4.2.1.1 | 2 |
lineage4.6.2.2 | 2 |
lineage4.3.2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage4.2.1 | 1 |
lineage3.1.1 | 2 |
lineage1.2.1.2 | 1 |
lineage6.3.1 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 206 |
ID | Drug resistance | Lineage | Country iso2 | ERR11050914 | Sensitive | lineage2.2.1 | None | ERR11050918 | Sensitive | lineage1.1.2 | None | ERR11050920 | Sensitive | lineage1.2.2.2 | None | ERR11050928 | HR-TB | lineage2.2.1 | None | SRR22528542 | MDR-TB | lineage4.4.1.1;lineage2.2.1 | None | ERR11050934 | Sensitive | lineage4.4.1.1 | None | SRR22528522 | MDR-TB | lineage4.1.1 | None | ERR11068743 | Other | lineage2.2.1 | None | SRR22528554 | Sensitive | lineage4.3.2 | None | SRR22528577 | MDR-TB | lineage4.3.3 | None | ERR11068489 | Sensitive | lineage4.3.4.2.1 | None | SRR23861907 | MDR-TB | lineage4.8 | None | ERR11068830 | Sensitive | lineage2.2.1 | None | ERR11068717 | Sensitive | lineage4.1.2.1 | None | SRR23861849 | Sensitive | lineage2.2.1 | None | SRR23861977 | Sensitive | lineage4.8 | None | SRR23562880 | Other | La1.4 | None | SRR23862013 | Sensitive | lineage2.2.1 | None | SRR23562881 | Other | La1.4 | None | SRR23562878 | Other | La1.4 | None | SRR23861924 | Sensitive | lineage4.8 | None | SRR23562879 | Other | La1.4 | None | SRR23938628 | Sensitive | lineage2.2.1 | None | SRR21887698 | MDR-TB | lineage2.2.1 | None | SRR23938656 | Other | lineage2.2.1 | None | SRR21887670 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887723 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887673 | MDR-TB | lineage2.2.1 | None | SRR21887667 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887705 | MDR-TB | lineage2.2.1 | None | SRR21887722 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887735 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887763 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887724 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887773 | MDR-TB | lineage2.2.1 | None | SRR21887677 | MDR-TB | lineage2.2.1 | None | SRR21887772 | MDR-TB | lineage2.2.1 | None | SRR21887666 | MDR-TB | lineage2.2.1 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887662 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR21887704 | MDR-TB | lineage2.2.1 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887678 | MDR-TB | lineage2.2.1 | None | SRR21887742 | MDR-TB | lineage2.2.1 | None | SRR21887715 | MDR-TB | lineage2.2.1 | None | SRR21887720 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887719 | MDR-TB | lineage2.2.1 | None | SRR21887731 | MDR-TB | lineage2.2.1 | None | SRR21887788 | MDR-TB | lineage2.2.1 | None | SRR21887769 | MDR-TB | lineage2.2.1 | None | SRR21887754 | MDR-TB | lineage4.5 | None | SRR21887781 | MDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | SRR21887674 | MDR-TB | lineage2.2.1 | None | SRR21887787 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887680 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887684 | MDR-TB | lineage2.2.1 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887694 | MDR-TB | lineage2.2.1 | None | SRR21887718 | RR-TB | lineage2.2.1 | None | SRR21887713 | MDR-TB | lineage2.2.1 | None | SRR21887708 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887757 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887707 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887728 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887776 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887717 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887770 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887760 | Pre-XDR-TB | lineage2.2.1 | None | SRR6650365 | Sensitive | lineage2.2.1 | None | ERR4813524 | Sensitive | lineage4.1.2 | None | ERR4813498 | Other | lineage4.1.1;lineage2.2.1 | None | ERR4813050 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813339 | MDR-TB | lineage4.3.3 | None | ERR4813516 | Sensitive | lineage4 | None | ERR2229311 | Sensitive | lineage4.8 | None | ERR4813535 | MDR-TB | lineage4.3.4.2 | pe | ERR2229258 | Sensitive | lineage4.8 | dk | ERR1950012 | Sensitive | lineage4.8 | None | ERR2229655 | Other | lineage4.8 | None | ERR4827461 | MDR-TB | lineage2.2.1 | None | SRR23082544 | Sensitive | lineage4.9 | None | ERR2510802 | Sensitive | lineage4.1.2.1 | None | ERR2843451 | HR-TB | lineage1.1.1 | None | ERR4828357 | Sensitive | lineage2.2.1 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4828388 | HR-TB | lineage1.1.1 | None | SRR9738556 | Pre-XDR-TB | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR6785365 | Other | lineage2.2.1 | None | ERR10748293 | MDR-TB | lineage4.1.1 | None | SRR8923705 | MDR-TB | lineage4.1.2 | None | SRR9224908 | MDR-TB | lineage4.3.3 | None | ERR10748287 | MDR-TB | lineage2.2.1 | None | ERR10748310 | MDR-TB | lineage2.2.1 | None | ERR10969156 | Sensitive | lineage2.2.1 | None | ERR10969119 | Sensitive | lineage4.8 | None | ERR10748321 | MDR-TB | lineage4.1.1.3 | None | ERR11049443 | Pre-XDR-TB | lineage2.2.1 | None | ERR10969200 | Sensitive | lineage4.3.4.1 | None | ERR10969225 | Sensitive | lineage4.3.2 | None | ERR11044258 | Sensitive | lineage4.1.2.1 | None | ERR10969210 | Sensitive | lineage4.2.2 | None | ERR4811969 | Sensitive | lineage4.3.3 | pe | ERR3838819 | Sensitive | lineage4.9 | None | ERR4553840 | Pre-XDR-TB | lineage3 | None | ERR4676901 | Sensitive | lineage4.3.4.1 | None | ERR4798151 | Sensitive | lineage3 | in | ERR4812164 | Sensitive | lineage4.1.2.1 | pe | ERR4812109 | Sensitive | lineage2.2.1 | pe | ERR4812270 | MDR-TB | lineage4.3.4.1 | None | ERR4812245 | MDR-TB | lineage4.3.2 | pe | ERR4812222 | Sensitive | lineage2.2.1 | pe | ERR4812252 | HR-TB | lineage4.3.3 | None | ERR6140656 | Other | La1.8.2 | None | ERR4812316 | Sensitive | lineage4.3.3 | None | ERR6139861 | Other | La1.8.2 | None | ERR4812280 | Sensitive | lineage4.1.1 | None | ERR7764357 | Other | lineage4.3.4.2 | None | ERR11049973 | Sensitive | lineage4.8 | None | ERR7764353 | RR-TB | lineage4.3.4.1 | None | ERR7764363 | Sensitive | lineage4.3.4.2 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | ERR7764342 | Sensitive | lineage4.3.4.2 | None | ERR11050115 | Sensitive | lineage4.8 | None | ERR7764409 | Sensitive | lineage4.3.4.1 | None | ERR11050103 | Sensitive | lineage4.4.2 | None | ERR11050113 | Sensitive | lineage2.2.1 | None | ERR7764394 | Other | lineage4.8 | None | ERR9811807 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11050118 | Sensitive | lineage1.2.2.2 | None | ERR11050219 | Sensitive | lineage4.5 | None | ERR11050204 | Sensitive | lineage4 | None | ERR11050209 | MDR-TB | lineage4.3.4.2 | None | ERR11050208 | MDR-TB | lineage4.3.4.2 | None | ERR11050304 | MDR-TB | lineage4.3.4.2 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR11050377 | Sensitive | lineage3 | None | SRR13399335 | Other | La1.2.BCG | None | ERR11050406 | HR-TB | lineage4.5 | None | SRR13399336 | Other | La1.2.BCG | None | ERR11050520 | HR-TB | lineage4.2.1.1 | None | SRR14782602 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782711 | Sensitive | lineage4.3.4.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR14801395 | Sensitive | lineage4.8 | None | ERR11050659 | Sensitive | lineage4.6.2.2 | None | ERR11050675 | Sensitive | lineage3 | None | SRR16156269 | Sensitive | lineage4.3.2.1 | None | SRR16157105 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050698 | Sensitive | lineage1.1.3.1 | None | SRR14801551 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801855 | HR-TB | lineage4.3.3 | None | SRR16157094 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR16295802 | Other | lineage2.2.1 | None | ERR11050707 | Sensitive | lineage3 | None | ERR11050702 | Sensitive | lineage3 | None | ERR11050725 | Sensitive | lineage4.8 | None | ERR11050751 | Sensitive | lineage4.5 | None | SRR18714950 | Sensitive | lineage4.1.2.1 | None | ERR11050764 | Sensitive | lineage3.1.1 | None | SRR18714774 | MDR-TB | lineage1.2.1.2 | None | ERR11050765 | Sensitive | lineage6.3.1 | None | SRR18714931 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715065 | MDR-TB | lineage4.1.2.1 | None | SRR18714961 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715085 | Sensitive | lineage4.8 | None | SRR18715075 | MDR-TB | lineage2.2.1 | None | SRR18715142 | Sensitive | lineage2.2.1 | None | SRR18715107 | Sensitive | lineage2.2.1 | None | SRR18715159 | Sensitive | lineage4.8 | None | SRR18715149 | Sensitive | lineage2.2.1 | None | SRR18715190 | MDR-TB | lineage2.2.1 | None | SRR18715189 | MDR-TB | lineage4.3.3 | None | SRR18715210 | Sensitive | lineage4.3.3 | None | SRR18715194 | Sensitive | lineage4.3.3 | None | ERR11050773 | Sensitive | lineage4.6.2.2 | None | SRR18715369 | Other | lineage2.2.1 | None | SRR18715294 | Sensitive | lineage4.8 | None | SRR18715366 | Sensitive | lineage4.3.3 | None | SRR18715300 | Other | lineage2.2.1 | None | SRR18715311 | Sensitive | lineage4.8 | None | SRR18715362 | Sensitive | lineage2.2.1 | None | SRR18715363 | MDR-TB | lineage2.2.1 | None | SRR18715397 | Sensitive | lineage4.3.3 | None | SRR18715396 | Sensitive | lineage2.2.1 | None | SRR18715372 | MDR-TB | lineage2.2.1 | None | SRR18715394 | Sensitive | lineage4 | None | SRR18715399 | Sensitive | lineage4.3.3 | None | SRR18715454 | Sensitive | lineage4.2.1.1 | None | ERR11050784 | Sensitive | lineage1.1.1 | None | ERR11050783 | HR-TB | lineage4.1.2.1 | None | SRR18715491 | Sensitive | lineage2.2.1 | None | ERR11050782 | Sensitive | lineage4.1.2.1 | None | ERR11050795 | Sensitive | lineage4.8 | None | ERR11050791 | Sensitive | lineage4.1.2 | None | ERR11050802 | Sensitive | lineage4.1.2.1 | None | ERR11050816 | Other | La1.7.1 | None | ERR11050828 | Sensitive | lineage3.1.1 | None | ERR11050815 | Sensitive | lineage2.2.1 | None |
---|