ERR4829706
|
HR-TB
|
lineage4.3.3
|
it
|
SAMN02584648
|
MDR-TB
|
lineage4.3.3
|
md
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516255
|
MDR-TB
|
lineage4.1.3
|
be
|
SAMN02360560
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SAMN02414992
|
Pre-XDR-TB
|
lineage4.3.3
|
se
|
ERR4828878
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4827590
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5535703
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR5535706
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2707109
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
ERR2706945
|
MDR-TB
|
lineage5.2
|
cd
|
SRR20969456
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4827479
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4827988
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828005
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5709860
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR5709889
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR5709910
|
MDR-TB
|
lineage2.2.1
|
th
|
SRR5709918
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR5709797
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
ERR4829011
|
MDR-TB
|
lineage4.3.3
|
it
|
SRR5710009
|
MDR-TB
|
lineage2.2.1
|
th
|
SRR5818615
|
MDR-TB
|
lineage1.1.2
|
dj
|
ERR4829597
|
MDR-TB
|
lineage4.3.3
|
it
|
ERR4830329
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829671
|
MDR-TB
|
lineage4.3.1
|
it
|
ERR4828993
|
MDR-TB
|
lineage4.2.2.2
|
it
|
ERR4972486
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6484920
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6257042
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4972476
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4972487
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3148036
|
Other
|
lineage4;lineage2.2.2
|
None
|
ERR3132092
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR4872274
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831275
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR4872279
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872349
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6831989
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6832014
|
HR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SAMN02380983
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
SRR6832189
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4972475
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6832756
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3132181
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6807703
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6807754
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR6824356
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR3132189
|
MDR-TB
|
lineage4.3.3;lineage4.1.4
|
None
|
SRR7341691
|
MDR-TB
|
lineage4.4.1.1
|
ro
|
SRR924210
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR924209
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR924237
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR833092
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
SRR7517810
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR833145
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
SRR7517772
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR8698478
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR847798
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR7517831
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR8698480
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698489
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698484
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR8698487
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698488
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698493
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698502
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698492
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR040125
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
SRR9971137
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR130196
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1035075
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR10680182
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035074
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR10762279
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762272
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043928
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11043662
|
RR-TB
|
lineage4.7
|
None
|
ERR11043392
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043745
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR11044164
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1199120
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
ERR1213860
|
MDR-TB
|
lineage2.2.2;lineage2.2.1
|
kr
|
ERR133903
|
MDR-TB
|
lineage4.3.3
|
ru
|
ERR1213928
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR137284
|
MDR-TB
|
lineage4.3.3
|
ru
|
ERR3287321
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287326
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR3287317
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287364
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287343
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287378
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR3287370
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287411
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287402
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287403
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287400
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR3287418
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287431
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287427
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR3287421
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287440
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287423
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287491
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287455
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287484
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287451
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287452
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287475
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287496
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287613
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287499
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287632
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287663
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287639
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287650
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287625
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287643
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287680
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287676
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287671
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287679
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287678
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287683
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287698
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287726
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287705
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287694
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287728
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287781
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287748
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287758
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4024675
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287793
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287806
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3335723
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR3639789
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3287790
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3794376
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4024621
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4024976
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4024826
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4024831
|
MDR-TB
|
lineage4.4.1.1;lineage4.3.3
|
None
|
ERR4178206
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4025028
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4178230
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811293
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4276882
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4276883
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4553657
|
RR-TB
|
lineage3.1.2.1
|
None
|
ERR4553778
|
MDR-TB
|
|
None
|
ERR4553809
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4798573
|
MDR-TB
|
lineage4.3.3
|
in
|
ERR4798790
|
Pre-XDR-TB
|
lineage4.3.3;lineage3.1
|
in
|
ERR4799203
|
Pre-XDR-TB
|
lineage4.8
|
in
|
ERR4799291
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4800679
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4423721
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4553427
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553547
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4553785
|
Pre-XDR-TB
|
lineage1.1.3.1
|
None
|
ERR4553813
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553832
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553929
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811724
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811755
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811781
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811760
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811824
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811832
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811900
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811873
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812177
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812079
|
MDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
ERR4812087
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812255
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812322
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812359
|
MDR-TB
|
lineage4.3.3;lineage4.1.1
|
pe
|
ERR4812323
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5865640
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812517
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR5865966
|
MDR-TB
|
lineage4.8
|
None
|
ERR5866400
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865965
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5866253
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866254
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866255
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866005
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR5866294
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5866402
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866401
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6865455
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR6358857
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR6358840
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358856
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR6865422
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865509
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866017
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865644
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865645
|
MDR-TB
|
lineage4.4.1.1;lineage4.3.3
|
None
|
ERR6865999
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865759
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866326
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866526
|
MDR-TB
|
lineage4.3.3;lineage4.1.2.1
|
None
|
ERR7362047
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR8773966
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751424
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751431
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751459
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751472
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751489
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751503
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751569
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751564
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751604
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775302
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775311
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775369
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775383
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR779847
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR779906
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910850
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910881
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910903
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7910931
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7910997
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751363
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751399
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751429
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751446
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751462
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751460
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751469
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751581
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751599
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR779895
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910990
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911015
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911356
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911357
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911361
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911362
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911368
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR7911380
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911381
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9027227
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR9029862
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1013546
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9029914
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9030298
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9125437
|
MDR-TB
|
lineage3
|
None
|
ERR9992787
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR1003105
|
Pre-XDR-TB
|
|
None
|
SRR1013545
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9029868
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9119389
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11050143
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1003106
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1003104
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1013561
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1062872
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1013562
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048844
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048845
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048861
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048862
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049561
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1049562
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR10808425
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808586
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808424
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808604
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR11349162
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10808702
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808916
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1173372
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1163374
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR1169046
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR1172073
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR1140569
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1163172
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR1165605
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1166116
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1166826
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1173311
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1367225
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1174312
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR13243567
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR13870377
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR13870386
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870392
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870405
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870389
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870387
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870376
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR14782658
|
MDR-TB
|
lineage4.2.1;lineage2.2.1
|
None
|
SRR13870414
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870428
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13870425
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR14782605
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15600351
|
MDR-TB
|
lineage4.8
|
None
|
SRR15600348
|
MDR-TB
|
lineage4.8
|
None
|
SRR16058383
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR15661592
|
MDR-TB
|
lineage4.8
|
None
|
SRR16058224
|
MDR-TB
|
lineage3
|
None
|
SRR16156787
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370501
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16370477
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16370486
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16370508
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18715235
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18715471
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR19276597
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR19276596
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21576627
|
MDR-TB
|
lineage2.1
|
None
|
SRR19276599
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR19276610
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR19276598
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR20969884
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424919
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR22424810
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR22175239
|
XDR-TB
|
lineage3.1.2;lineage2.2.1
|
None
|
ERR11080848
|
MDR-TB
|
lineage3
|
None
|
SRR22424941
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR22424946
|
MDR-TB
|
lineage3
|
None
|
ERR11081032
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081787
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR11081452
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081813
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4813723
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11081998
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10828613
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813694
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813714
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21887742
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813701
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813712
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813720
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812727
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813734
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3082090
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR3105743
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR4812738
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812733
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812819
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812768
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812795
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812811
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4812810
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812837
|
MDR-TB
|
lineage4
|
None
|
ERR4812856
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812843
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4812852
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812850
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812866
|
HR-TB
|
lineage4
|
None
|
ERR4812874
|
Other
|
lineage4.3.4
|
None
|
ERR4812830
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812844
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516778
|
MDR-TB
|
lineage4.3.3
|
gb
|
ERR4812886
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812953
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812891
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812947
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812942
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4812945
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812981
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
pe
|
ERR4812963
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812971
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4812968
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813029
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812977
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812988
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812991
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813024
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813039
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813037
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813055
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813050
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813069
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813111
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813102
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813110
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813072
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813086
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813087
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813113
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813121
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813112
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813116
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813134
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813125
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813130
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813152
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813145
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813163
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813164
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813160
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813180
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
pe
|
ERR4813169
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813189
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813183
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813185
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813193
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813343
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813201
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813220
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813244
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813345
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813218
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813296
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813302
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813304
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813337
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813340
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813366
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813348
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813352
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR137209
|
MDR-TB
|
lineage4.3.3
|
ru
|
ERR4813357
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813353
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813360
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813363
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813370
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813447
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813390
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813427
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813436
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813438
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813440
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813442
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813401
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813441
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813464
|
MDR-TB
|
lineage4.3.4.2;lineage4.3.3
|
pe
|
ERR4813476
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813468
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813474
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813577
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813605
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813595
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813628
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813627
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813613
|
MDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
ERR4813634
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813646
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813645
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813679
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813651
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813670
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813664
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813674
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813689
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813688
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813695
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813684
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813687
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02584584
|
MDR-TB
|
lineage4.3.3
|
md
|
ERR4813697
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516375
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3732721
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2516266
|
MDR-TB
|
lineage4.3.3
|
be
|
SRR3732584
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3732678
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287335
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR2184413
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2184222
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02414981
|
MDR-TB
|
lineage4.3.3
|
se
|
SRR3742668
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2184223
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2184325
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR3743380
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2184429
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMN02360620
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SAMN02419670
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
by
|
ERR2184591
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02360626
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SRR3743497
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2510167
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2516161
|
MDR-TB
|
lineage4.3.3
|
es
|
ERR2516401
|
MDR-TB
|
lineage4.7
|
nl
|
SAMN02360552
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR2516344
|
MDR-TB
|
lineage4.1.3
|
be
|
SRR5266538
|
Pre-XDR-TB
|
lineage4.3.3
|
ru
|
SRR5341398
|
Pre-XDR-TB
|
lineage4.1.1.3;lineage3
|
in
|
SRR5153309
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1723454
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR5153864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02414991
|
Pre-XDR-TB
|
lineage4.3.3
|
se
|
ERR2516528
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2516504
|
MDR-TB
|
lineage4.3.3
|
pe
|