SRR6824669
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SAMN02053777
|
MDR-TB
|
lineage4.3.2.1
|
za
|
ERR3132132
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR9971274
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9224939
|
Pre-XDR-TB
|
lineage4.3.2
|
None
|
ERR502955
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9971284
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9971282
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9971287
|
MDR-TB
|
lineage4.4.1.1.1;lineage4.3.2.1
|
None
|
SRR9971340
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9971283
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR833000
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR832978
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR832993
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR832988
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9971360
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR833022
|
HR-TB
|
lineage4
|
None
|
SRR9971348
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR833030
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR833076
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR833120
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR833081
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR833101
|
MDR-TB
|
lineage4
|
None
|
SRR833148
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR833098
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9971163
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR833132
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9971067
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SAMN02403555
|
MDR-TB
|
lineage4.4.1.1.1
|
sz
|
SRR7645977
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR9971173
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR040120
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
SRR9971234
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR040115
|
MDR-TB
|
lineage4.1.1.3
|
ug
|
ERR10762370
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10748360
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4423631
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR1213851
|
MDR-TB
|
lineage2.2.2
|
kr
|
ERR1193888
|
MDR-TB
|
lineage4.3.2.1
|
sz
|
ERR1199113
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
ERR1213890
|
MDR-TB
|
lineage4.3.4.2.1
|
rw
|
ERR3273218
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4025143
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4423632
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4553863
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4423645
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4423644
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4553879
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4553932
|
Pre-XDR-TB
|
lineage4.1
|
None
|
ERR4553894
|
Pre-XDR-TB
|
lineage4.1
|
None
|
ERR4553917
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4811300
|
MDR-TB
|
lineage4.4.2
|
cn
|
ERR4800516
|
MDR-TB
|
lineage4.3
|
in
|
ERR5865637
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865138
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865139
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5987278
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR5865636
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5918146
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR6358722
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR7361998
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR6358801
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR6865706
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6358921
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR760759
|
MDR-TB
|
lineage4.1.2.1.1
|
ar
|
ERR760904
|
MDR-TB
|
lineage4.1.2.1.1
|
ar
|
ERR7737922
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR760915
|
MDR-TB
|
lineage4.1.2.1.1
|
ar
|
ERR7737691
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR7737941
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR760919
|
MDR-TB
|
lineage4.1.2.1.1
|
ar
|
ERR7821131
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR775363
|
MDR-TB
|
lineage4.1.2
|
pe
|
ERR8773991
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911148
|
Pre-XDR-TB
|
lineage2.2.1
|
vn
|
ERR8975847
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR8774274
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR8774275
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9992968
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR9119701
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR9286033
|
HR-TB
|
lineage4.3
|
None
|
ERR9786709
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR987760
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9992624
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR9993113
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315642
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1019159
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315636
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1019168
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1019173
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR10315644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315641
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315725
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315727
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315726
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349161
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10315733
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR10380167
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349155
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349154
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349156
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1140945
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349171
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1140926
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349160
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1140929
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1165250
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1165237
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1165623
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165253
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1165642
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165643
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR1165651
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165650
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165676
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165648
|
MDR-TB
|
|
None
|
SRR1165664
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165687
|
MDR-TB
|
lineage4.4.1.1;lineage4.3.4.2.1
|
None
|
SRR1167354
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165706
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165721
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1167179
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1167287
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1167312
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1165702
|
MDR-TB
|
|
None
|
SRR1167334
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1167357
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1167385
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1167364
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1167365
|
MDR-TB
|
|
None
|
SRR1167393
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1168964
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169059
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1167390
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1169178
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169176
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169168
|
MDR-TB
|
lineage4.4.1.1.1;lineage4.3.4.2.1
|
None
|
SRR1169211
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169199
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169222
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169240
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169262
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169245
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169307
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169275
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1172233
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1169312
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1172221
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1172259
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1172276
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1172253
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1173144
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1172317
|
MDR-TB
|
lineage4.4.1.1;lineage4.3.4.2.1
|
None
|
SRR1172365
|
MDR-TB
|
lineage4.4.1.1.1;lineage4.3.4.2.1
|
None
|
SRR1173364
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1173333
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1173145
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR13232751
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1175359
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1175347
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR13583401
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR13583426
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR13583411
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR15014605
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR14088383
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR14801751
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR15316366
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15316477
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR15316370
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15316368
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15316369
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16115035
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11081743
|
MDR-TB
|
lineage4.8
|
None
|
SRR16156820
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR16370425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424748
|
RR-TB
|
lineage4.8
|
None
|
ERR11068112
|
MDR-TB
|
lineage4.1
|
None
|
SRR18714919
|
MDR-TB
|
lineage4.1
|
None
|
SRR18912066
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR21686600
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11081231
|
MDR-TB
|
lineage4.8
|
None
|
ERR11081926
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02403562
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR11082366
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813823
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02403548
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
SAMN02053790
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR4812855
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2041732
|
MDR-TB
|
lineage4.8
|
rs
|
SAMN02350490
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
za
|
SAMN02403547
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SAMN02350489
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR2510509
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SAMN02053757
|
MDR-TB
|
lineage4.3.2.1
|
za
|
ERR2510357
|
MDR-TB
|
lineage3
|
pk
|
ERR2433003
|
MDR-TB
|
lineage4.3.4.2.1
|
br
|
SAMN02350484
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
SAMN02403586
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR2516526
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR1723476
|
MDR-TB
|
lineage2.2.1
|
cn
|
SAMN02403524
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR552789
|
MDR-TB
|
lineage4.3.2.1
|
sz
|
SAMN02403551
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
SAMN02403563
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR2516636
|
MDR-TB
|
lineage4.3.4.1
|
pe
|
ERR2516696
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
SAMN02403565
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR2706919
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
ERR2653143
|
Pre-XDR-TB
|
lineage4.3.2
|
None
|
SRR5535830
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR2653088
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2653160
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2653210
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4827736
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2706995
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707089
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
ERR4827778
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830517
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR4827965
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02403552
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR4830543
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4829971
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR4829764
|
MDR-TB
|
lineage4.1.2.1
|
it
|
ERR4828728
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR4829007
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
ERR4829832
|
Pre-XDR-TB
|
lineage4.3
|
None
|
ERR3132272
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SAMN01828244
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
SAMEA2535113
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMN02403518
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
SAMN02403519
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR3132076
|
MDR-TB
|
lineage2.2
|
None
|