Rv3919c - c.161_290del
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
96 MDR-TB
116 Pre-XDR-TB
17 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 231 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 231 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2515400 | MDR-TB | lineage4.3.3 | za | ERR2515948 | MDR-TB | lineage4.3.3 | za | ERR2516031 | MDR-TB | lineage4.3.3 | za | ERR2515614 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515724 | MDR-TB | lineage4.3.3 | za | ERR2515319 | Pre-XDR-TB | lineage4.3.3 | za | ERR8976013 | MDR-TB | lineage4.3.3 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | SAMN02586074 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586075 | XDR-TB | lineage4.3.3 | None | ERR9992612 | XDR-TB | lineage4.3.3 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288743 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925668 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR13289005 | MDR-TB | lineage4.3.3 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR10748249 | MDR-TB | lineage4.3.3 | None | ERR8975722 | MDR-TB | lineage4.3.3 | None | SAMN02350427 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350413 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925619 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350434 | MDR-TB | lineage4.3.3 | za | SAMN02350425 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350430 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350426 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350431 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350422 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403550 | MDR-TB | lineage4.3.3 | za | SAMN02403549 | MDR-TB | lineage4.3.3 | za | SAMN02403621 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350460 | MDR-TB | lineage4.3.3 | za | SAMN02403572 | MDR-TB | lineage4.3.3 | za | SAMN02586076 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585997 | MDR-TB | lineage4.3.3 | za | SAMN02586014 | MDR-TB | lineage4.3.3 | za | SAMN02585981 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586009 | MDR-TB | lineage4.3.3 | za | SAMN02586034 | MDR-TB | lineage4.3.3 | za | ERR4809290 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918120 | XDR-TB | lineage4.3.3 | za | ERR5917976 | XDR-TB | lineage4.3.3 | za | ERR5918143 | MDR-TB | lineage4.3.3 | za | ERR4830507 | MDR-TB | lineage4.3.3 | za | ERR4830524 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911190 | MDR-TB | lineage4.3.3 | za | ERR7911192 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911209 | MDR-TB | lineage4.3.3 | za | ERR7911213 | MDR-TB | lineage4.3.3 | za | ERR7911444 | MDR-TB | lineage4.3.3 | za | ERR8975763 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975821 | XDR-TB | lineage4.3.3 | None | ERR8975914 | MDR-TB | lineage4.3.3 | None | SRR2101539 | MDR-TB | lineage4.3.3 | None | ERR2515293 | MDR-TB | lineage4.3.3 | za | ERR2515175 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515988 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515153 | Pre-XDR-TB | lineage4.3.3 | za | ERR13288939 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02053773 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053781 | MDR-TB | lineage4.3.3 | za | SAMN02053785 | MDR-TB | lineage4.3.3 | za | SAMN02053805 | MDR-TB | lineage4.3.3 | za | SRR833077 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350412 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350421 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350416 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350481 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350475 | MDR-TB | lineage4.3.3 | za | SAMN02585964 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586070 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586068 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586087 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586080 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586079 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586081 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586084 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586090 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586093 | MDR-TB | lineage4.3.3 | za | SAMN02586094 | MDR-TB | lineage4.3.3 | za | SAMN02586085 | MDR-TB | lineage4.3.3 | za | SAMN02586102 | HR-TB | lineage4.3.3 | za | SAMN02586101 | MDR-TB | lineage4.3.3 | za | SAMN02586011 | MDR-TB | lineage4.3.3 | za | SAMN02586017 | XDR-TB | lineage4.3.3 | za | SAMN02586018 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586040 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586041 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586045 | MDR-TB | lineage4.3.3 | za | ERR13288938 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286209 | MDR-TB | lineage4.3.3 | None | ERR13286170 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286214 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289051 | MDR-TB | lineage4.3.3 | None | ERR13288769 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289393 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808891 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975515 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809318 | MDR-TB | lineage4.3.3 | za | ERR4809248 | MDR-TB | lineage4.3.3 | za | ERR4808988 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918119 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975004 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975080 | Pre-XDR-TB | lineage4.3.3 | None | ERR1633780 | MDR-TB | lineage4.3.3 | za | ERR13288915 | MDR-TB | lineage4.3.3 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR4830559 | XDR-TB | lineage4.3.3 | None | ERR8975412 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350415 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350417 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403568 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403567 | MDR-TB | lineage4.3.3 | za | SAMN02403569 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403573 | MDR-TB | lineage4.3.3 | za | SAMN02585987 | MDR-TB | lineage4.3.3 | za | SAMN02586073 | Pre-XDR-TB | lineage4.3.3 | za | ERR4809038 | MDR-TB | lineage4.3.3 | za | ERR4808877 | Pre-XDR-TB | lineage4.3.3 | za | ERR4808921 | MDR-TB | lineage4.3.3 | None | ERR4808975 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830865 | MDR-TB | lineage4.3.3 | sz | ERR5917968 | Pre-XDR-TB | lineage4.3.3 | za | ERR4808971 | MDR-TB | lineage4.3.3 | None | ERR4809168 | MDR-TB | lineage4.3.3 | za | ERR4809225 | MDR-TB | lineage4.3.3 | za | ERR4809238 | MDR-TB | lineage4.3.3 | za | ERR4809347 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918144 | MDR-TB | lineage4.3.3 | za | ERR7911566 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830469 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830558 | XDR-TB | lineage4.3.3 | None | ERR7911198 | MDR-TB | lineage4.3.3 | za | ERR7911206 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911207 | MDR-TB | lineage4.3.3 | za | ERR7911430 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911208 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830515 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830554 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830557 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830506 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911443 | MDR-TB | lineage4.3.3 | za | ERR8975018 | XDR-TB | lineage4.3.3 | None | ERR8975783 | XDR-TB | lineage4.3.3 | None | ERR8975698 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975605 | MDR-TB | lineage4.3.3 | None | ERR8975695 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975819 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975820 | XDR-TB | lineage4.3.3 | None | ERR8975982 | XDR-TB | lineage4.3.3 | None | ERR1193747 | MDR-TB | lineage4.3.3 | za | ERR2516797 | MDR-TB | lineage4.3.3 | gb | ERR2515375 | HR-TB | lineage4.3.3 | za | ERR2515936 | MDR-TB | lineage4.3.3 | za | SRR833105 | Pre-XDR-TB | lineage4.3.3 | za | SRR847796 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350429 | Pre-XDR-TB | lineage4.3.3 | za | SRR847776 | Pre-XDR-TB | lineage4.3.3 | za | SRR847789 | Pre-XDR-TB | lineage4.3.3 | za | SRR847783 | Pre-XDR-TB | lineage4.3.3 | za | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925663 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350433 | Pre-XDR-TB | lineage4.3.3 | za | SRR847785 | Pre-XDR-TB | lineage4.3.3 | za | SRR847791 | Pre-XDR-TB | lineage4.3.3 | za | SRR847781 | MDR-TB | lineage4.3.3 | za | SAMN02350441 | MDR-TB | lineage4.3.3 | za | SRR847784 | MDR-TB | lineage4.3.3 | za | SAMN02350485 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585969 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585973 | Pre-XDR-TB | lineage4.3.3 | za | ERR13288794 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288989 | MDR-TB | lineage4.3.3 | None | ERR2515506 | MDR-TB | lineage4.3.3 | za | ERR2516069 | MDR-TB | lineage4.3.3 | za | ERR2515682 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515754 | Pre-XDR-TB | lineage4.3.3 | za | ERR10748474 | MDR-TB | lineage4.3.3 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289280 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288982 | MDR-TB | lineage4.3.3 | None | ERR4808881 | MDR-TB | lineage4.3.3 | za | ERR4808878 | MDR-TB | lineage4.3.3 | za | ERR7911687 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918042 | XDR-TB | lineage4.3.3 | za | ERR8975682 | XDR-TB | lineage4.3.3 | None | ERR1193882 | MDR-TB | lineage4.3.3 | za | ERR1193881 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515776 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515797 | MDR-TB | lineage4.3.3 | za | ERR2515924 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515344 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515560 | MDR-TB | lineage4.3.3 | za | ERR2515411 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053746 | MDR-TB | lineage4.3.3 | za | SAMN02053751 | MDR-TB | lineage4.3.3 | za | SAMN02053760 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053766 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01828243 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585957 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585960 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585962 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350477 | MDR-TB | lineage4.3.3 | za | SAMN02585959 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585977 | MDR-TB | lineage4.3.3 | za | SAMN02585976 | MDR-TB | lineage4.3.3 | za | SAMN02586059 | MDR-TB | lineage4.3.3 | za | SAMN02586057 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585978 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586063 | MDR-TB | lineage4.3.3 | za | SAMN02586104 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586065 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586061 | MDR-TB | lineage4.3.3 | za | SAMN02586066 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403504 | MDR-TB | lineage4.3.3 | za | SAMN02403505 | MDR-TB | lineage4.3.3 | za | SAMN02403512 | MDR-TB | lineage4.3.3 | za | SAMN02403513 | MDR-TB | lineage4.3.3 | za |
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