EBG00000313325 - n.33C>T
Drug resistance types
13 Sensitive
10 RR-TB
5 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| La1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9.1 | 1 |
| lineage2.2.1 | 10 |
| lineage3 | 5 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 8 |
| lineage4.9 | 22 |
| lineage4.6.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4 | 6 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage1.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| 1 | |
| lineage3.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| La1.2 | 4 |
| lineage4.1.4 | 1 |
| La1.8.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1791940 | Other | La1.8.1 | None | SRR16278274 | Other | La1.4 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR19428575 | Sensitive | lineage4.3.4.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081990 | MDR-TB | lineage2.2.1 | None | ERR11082389 | MDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR2229031 | Other | lineage4.9 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR4817018 | Other | lineage4.3.3 | None | ERR2228810 | RR-TB | lineage4 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229336 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2228822 | Other | lineage4.9 | None | ERR2228873 | Other | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR4819687 | HR-TB | lineage1.2.1 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228874 | Other | lineage4 | None | ERR4817874 | Other | lineage3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6044830 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045379 | Other | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6046015 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | ERR2851371 | Other | lineage4.9 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6046815 | Other | lineage3 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982275 | Other | lineage2.2.1 | None | ERR11465982 | Sensitive | lineage4.3.4.2.1 | None | ERR11465983 | Sensitive | lineage4.3.4.2.1 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR8073606 | Other | La1.8.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7851312 | Other | La1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR4132447 | HR-TB | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR4187652 | Other | lineage4.9 | None | ERR4627376 | Other | La1.8.1 | None | ERR6198389 | Other | La1.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6201843 | Other | La1.2 | None | ERR6201802 | Other | La1.2 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR13861183 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None |
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