EBG00000313325 - n.824_825insTGGA
Drug resistance types
5 Sensitive
0 RR-TB
12 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 1 |
| lineage2.2.1 | 86 |
| lineage4.2.2 | 10 |
| lineage4.9 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.2.1 | 1 |
| La1.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2;lineage4.5 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| La3;lineage4 | 1 |
| La1.8.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18391683 | Other | La1.7.1 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295802 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR21240038 | Other | lineage4.1.2.1 | None | ERR3559274 | HR-TB | lineage4.2.2 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | ERR3559281 | HR-TB | lineage4.2.2 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR11241401 | MDR-TB | lineage4.3.3 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | ERR4769546 | Other | La1.3 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR16295757 | Other | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR21240141 | Other | lineage4.3.3 | None | ERR2307498 | HR-TB | lineage2.2.1 | None | SRR7069903 | Other | lineage4.1.1.3.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | ERR2600574 | MDR-TB | lineage2.2.1 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | SRR6824440 | Sensitive | lineage4.4.2;lineage4.5 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | SRR16295797 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295758 | Other | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3559279 | HR-TB | lineage4.2.2 | None | ERR3559284 | HR-TB | lineage4.2.2 | None | SRR7236398 | Other | La1.8.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295764 | Other | lineage2.2.1 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295768 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR2101087 | Other | lineage4.4.2 | None | ERR3283051 | Other | lineage4.9 | None | SRR16295784 | Other | lineage2.2.1 | None | ERR3559304 | HR-TB | lineage4.2.2 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295755 | Other | lineage2.2.1 | None |
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