EBG00000313339 - n.1143delT
Drug resistance types
6 Sensitive
13 RR-TB
2 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 23 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 4 |
| lineage4.1.1.3 | 2 |
| lineage4.3.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.9 | 3 |
| lineage4.3.2 | 1 |
| lineage3 | 1 |
| lineage4.4.1.2 | 2 |
| lineage2.2.2 | 1 |
| La1.8.1 | 3 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 47 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21658372 | Sensitive | lineage1.2.1.2.1 | None | SRR11972316 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | SAMEA3501015 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2229553 | Sensitive | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229801 | Other | lineage4 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2229804 | Other | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR5074294 | Sensitive | lineage4.4.1.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6397359 | Other | lineage4.3.2 | ca | ERR4828879 | MDR-TB | lineage3 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR5311092 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR8600107 | Other | La1.8.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | ERR4407553 | Sensitive | lineage4.6.2.2 | None | SRR1173833 | Other | lineage4.9 | None |
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