EBG00000313339 - n.1219T>A
Drug resistance types
19 Sensitive
0 RR-TB
18 HR-TB
14 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1 | 12 |
| lineage4.3.3 | 3 |
| lineage4.9 | 13 |
| lineage4.6 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2 | 9 |
| lineage2.2.1.1 | 2 |
| lineage4 | 2 |
| 8 | |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2 | 9 |
| lineage4.9;lineage2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.8 | 2 |
| lineage4.4.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3588222 | Other | La1.7.1 | None | SRR7131018 | Sensitive | lineage4.3.1 | None | SRR8217902 | MDR-TB | lineage2.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR3283015 | Sensitive | lineage4.9 | None | SRR8649119 | Other | lineage4.6 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR473279 | Other | lineage4.9 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR405191 | Other | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SRR058376 | Sensitive | lineage4.1.1.2 | None | ERR8773933 | MDR-TB | lineage4.1.2.1 | None | ERR9285923 | Sensitive | lineage4.3.4.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013618 | MDR-TB | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR10272566 | Other | lineage4.3.3 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048983 | HR-TB | None | SRR1048885 | MDR-TB | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048982 | HR-TB | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1173720 | Other | lineage4.9 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR14782727 | Sensitive | lineage4.8 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR19303788 | Sensitive | lineage4.8 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SRR6045764 | Sensitive | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046834 | Sensitive | lineage4.9 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR245790 | Sensitive | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR6045379 | Other | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None |
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