EBG00000313339 - n.1869C>T


Drug resistance types
16 Sensitive 13 RR-TB 11 HR-TB 6 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 70 Other
lineage Counts
lineage Count
lineage4.9 9
lineage1.1.2 3
lineage4.1.2.1 14
1
lineage4.8 11
lineage5 2
lineage4.6.2.2 5
lineage2.2.1 5
lineage3 16
lineage4.3.3 6
lineage4.2.1 2
lineage4 4
lineage1.1.3.3 1
lineage4.8;lineage3 1
lineage4.4.1.1 3
lineage3.1.1 3
lineage4.6.5 2
lineage2.2.1.1 5
lineage4.6.1 1
lineage1.1.1 3
lineage4.2.1.1 1
lineage4.3.4 1
lineage4.2.2.2 3
lineage4.3 1
lineage4.6.1.1 2
lineage4.9;lineage2 1
lineage4.4.2 1
lineage4.1.1 1
lineage1.1.3.1 3
lineage4.1 1
lineage1.2.1.1 1
lineage4.1.2 1
lineage3.1.2.1 1
lineage4.3.4.1 1
lineage3.1.2 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 118
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045485 Other lineage4.9 None
ERR4821563 HR-TB lineage1.1.2 gb
ERR4821360 Other lineage4.1.2.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821214 RR-TB None
ERR4821286 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4822167 Other lineage4.6.2.2 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6044817 Other lineage3 None
SRR6044784 MDR-TB lineage3 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821761 Other lineage3 gb
SRR6045664 Other lineage4.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045957 Other lineage4.9 None
SRR6046020 Other lineage3 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046219 Other lineage4.8;lineage3 gb
SRR6046521 Other lineage4.4.1.1 None
ERR4829337 Other lineage4.8 None
SRR6046766 Other lineage3.1.1 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
ERR10796565 RR-TB lineage4.9 None
SRR7131287 Other lineage2.2.1.1 None
ERR028330 Sensitive lineage4.6.1 None
ERR028338 Sensitive lineage1.1.1 None
SRR6046852 MDR-TB lineage3 None
SRR7646056 Other lineage4.2.1.1 None
ERR017781 Other lineage3 None
ERR019855 Other lineage3 None
ERR10796564 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796636 Other lineage4.1.2.1 None
ERR773806 Sensitive lineage2.2.1 None
ERR4799940 Sensitive lineage1.1.2 in
ERR11043208 Sensitive lineage1.1.1 None
ERR114501 Sensitive lineage4.2.2.2 None
SRR1013610 HR-TB lineage4 None
ERR11049992 Sensitive lineage4.8 None
ERR9117760 HR-TB lineage4.3 None
ERR9117788 Other lineage3 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140586 HR-TB lineage4.9 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR13423648 Sensitive lineage2.2.1.1 None
SRR1181250 Other lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR18213795 Sensitive lineage4.2.2.2 None
ERR4815301 Other lineage4.4.2 None
SRR2100348 Sensitive lineage4.2.2.2 None
SRR22048374 Sensitive lineage4.8 None
ERR4815193 MDR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
ERR4815777 Other lineage4.9 None
ERR4814709 Other lineage4.1.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
ERR4814896 Other lineage2.2.1.1 None
ERR4814763 Other lineage2.2.1 None
ERR4815502 Other lineage4.1 None
ERR4814911 Other lineage4.3.3 None
ERR4816232 Other lineage4 None
ERR4816968 Other lineage4.2.1 gb
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
SAMN02381005 Other lineage4.6.1.1 None
ERR4816967 RR-TB lineage5 None
ERR4816270 Other lineage4.1.2.1 None
ERR4817055 Other lineage4.1.2.1 None
ERR4816464 Other lineage3 None
ERR4816531 Other lineage4.1.2 None
ERR4817194 Other lineage4.1.2.1 None
SRR3742667 Sensitive lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816856 Other lineage4.1.2.1 None
ERR4818655 Other lineage4.3.3 None
ERR234155 Sensitive lineage1.1.1 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4818752 Other lineage3 None
ERR4818691 Other lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
SRR5073946 Sensitive lineage2.2.1.1 vn
ERR4819073 Other lineage4.1.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR4818570 Other lineage4.3.3 None
ERR4818465 Other lineage3 gb
ERR4817584 MDR-TB lineage3 None
ERR4819191 Other lineage4.6.2.2 None
ERR4820230 Other lineage4.1.2.1 gb
ERR4819166 Other lineage3 gb
ERR4820720 Other lineage4.1.2.1 None
ERR4819198 Other lineage2.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819533 Other lineage1.1.2 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819324 Other lineage4.8 gb
ERR4820324 Other lineage4 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819636 Other lineage3.1.2 None
ERR4819622 Other lineage4.1.2.1 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820151 RR-TB lineage4.8 None
ERR4820188 Other lineage3 gb
ERR4821028 Sensitive lineage3.1.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820817 Other lineage4.1.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4821812 Other lineage4.8 gb