EBG00000313339 - n.1869C>T
Drug resistance types
16 Sensitive
13 RR-TB
11 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 9 |
| lineage1.1.2 | 3 |
| lineage4.1.2.1 | 14 |
| 1 | |
| lineage4.8 | 11 |
| lineage5 | 2 |
| lineage4.6.2.2 | 5 |
| lineage2.2.1 | 5 |
| lineage3 | 16 |
| lineage4.3.3 | 6 |
| lineage4.2.1 | 2 |
| lineage4 | 4 |
| lineage1.1.3.3 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.1 | 3 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.6.1 | 1 |
| lineage1.1.1 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.3 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.9;lineage2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 118 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045485 | Other | lineage4.9 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821360 | Other | lineage4.1.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6044817 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | SRR6045664 | Other | lineage4.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046521 | Other | lineage4.4.1.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR10796565 | RR-TB | lineage4.9 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR028330 | Sensitive | lineage4.6.1 | None | ERR028338 | Sensitive | lineage1.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR4799940 | Sensitive | lineage1.1.2 | in | ERR11043208 | Sensitive | lineage1.1.1 | None | ERR114501 | Sensitive | lineage4.2.2.2 | None | SRR1013610 | HR-TB | lineage4 | None | ERR11049992 | Sensitive | lineage4.8 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117788 | Other | lineage3 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR13423648 | Sensitive | lineage2.2.1.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR18213795 | Sensitive | lineage4.2.2.2 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR2100348 | Sensitive | lineage4.2.2.2 | None | SRR22048374 | Sensitive | lineage4.8 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4816232 | Other | lineage4 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4817194 | Other | lineage4.1.2.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR234155 | Sensitive | lineage1.1.1 | None | ERR4817874 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818752 | Other | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR5073946 | Sensitive | lineage2.2.1.1 | vn | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818465 | Other | lineage3 | gb | ERR4817584 | MDR-TB | lineage3 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820188 | Other | lineage3 | gb | ERR4821028 | Sensitive | lineage3.1.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821812 | Other | lineage4.8 | gb |
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