Rv0005 - c.580C>T
Drug resistance types
11 Sensitive
0 RR-TB
20 HR-TB
0 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| 23 | |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 12 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 2 |
| La2 | 1 |
| lineage2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1174897 | HR-TB | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR3675550 | Other | None | ERR4817342 | Other | lineage4.1.1 | None | ERR1035162 | Other | None | SRR5341418 | Other | None | SRR5341387 | Other | lineage4 | None | ERR400404 | Sensitive | lineage1.2.2.2 | gb | SRR5341308 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR323039 | HR-TB | None | ERR502889 | Other | None | ERR1035122 | Sensitive | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR323085 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR4407550 | Sensitive | lineage1 | None | ERR4798406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR987722 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None |
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