Rv0005 - p.Thr500Ala
Drug resistance types
34 Sensitive
3 RR-TB
4 HR-TB
32 MDR-TB
23 Pre-XDR-TB
4 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| 5 | |
| lineage4.8 | 4 |
| lineage2.2.2 | 4 |
| lineage4.9 | 31 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2 | 1 |
| lineage3 | 4 |
| La1.4 | 1 |
| lineage3;lineage2.2.1.1 | 1 |
| lineage2.2.1.1 | 9 |
| lineage1.1.2 | 2 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.2.2.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2 | 3 |
| lineage4 | 4 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9992776 | MDR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9992830 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013617 | MDR-TB | None | SRR1013618 | MDR-TB | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11567812 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869058 | MDR-TB | lineage2.2.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR15465769 | MDR-TB | lineage2.2.1.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14088376 | MDR-TB | lineage3 | None | SRR16157050 | MDR-TB | lineage2.2.1 | None | SRR16157047 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16157048 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610353 | Pre-XDR-TB | lineage2.2.2 | None | SRR16278274 | Other | La1.4 | None | SRR25827693 | MDR-TB | lineage3;lineage2.2.1.1 | None | SRR18715489 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827367 | MDR-TB | lineage2.2.1.1 | None | SRR19428582 | Sensitive | lineage1.1.2 | None | SRR25827440 | XDR-TB | lineage3;lineage2.2.1 | None | SRR25827577 | MDR-TB | lineage2.2.1.1 | None | ERR9806662 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389454 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827490 | XDR-TB | lineage2.2.1 | None | ERR2041763 | MDR-TB | lineage4.2.2.1 | rs | SRR3082094 | Pre-XDR-TB | lineage1.1.2 | None | SRR3105774 | MDR-TB | lineage3 | None | ERR1873475 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2707209 | MDR-TB | lineage4.3.4.2 | cd | ERR7911036 | MDR-TB | lineage2.2.1 | md | SRR6153007 | Sensitive | lineage2.2.1 | ca | ERR2706989 | MDR-TB | lineage4.3.4.2 | cd | SRR5486878 | MDR-TB | lineage4.1.2.1 | None | ERR2653199 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR144542 | Pre-XDR-TB | lineage2.2.1 | ru | SRR7585432 | Pre-XDR-TB | lineage3 | in | ERR4798326 | MDR-TB | lineage2.2.1.1 | in | ERR4798091 | MDR-TB | lineage4.8 | in | ERR4799841 | MDR-TB | lineage2.2.1 | in | ERR4797800 | MDR-TB | lineage4.8 | in | ERR2516746 | MDR-TB | lineage3 | gb | ERR4797965 | XDR-TB | lineage2.2.1 | in | ERR2516715 | MDR-TB | lineage4.2.2.1 | nl | ERR4798043 | MDR-TB | lineage4.8 | in | ERR2516576 | MDR-TB | lineage4 | pe | ERR4797191 | XDR-TB | lineage2.2.1 | in | ERR4796823 | MDR-TB | lineage2.2.1.1 | in | SRR8651615 | Pre-XDR-TB | lineage2.2.2 | cn | SRR6256972 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4800562 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800394 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800573 | Pre-XDR-TB | lineage2.2.1 | in | SRR7496471 | Sensitive | None | ERR4809037 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4553710 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR11798608 | MDR-TB | lineage2.2.1 | None | ERR4798809 | Pre-XDR-TB | lineage2.2.1 | None | DRR130075 | MDR-TB | lineage2.2.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4800613 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4809358 | RR-TB | lineage2.2.1.1 | za | ERR5918014 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR7975657 | MDR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None |
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