Rv0005 - p.Thr500Ala

Drug resistance types
22 Sensitive 1 RR-TB 3 HR-TB 29 MDR-TB 25 Pre-XDR-TB 6 XDR-TB 1 Other
lineage Counts
lineage Count
lineage3.1.2.1 2
lineage2.2.1.1 9
lineage2.2.1 24
lineage2.2.1;lineage3 1
lineage4.8 4
lineage4.9 19
lineage2.2.1;lineage4 1
lineage2.2.2 4
lineage4.3.4.2 3
lineage2.2.1.1;lineage3 1
lineage1.1.2 1
lineage3 3
lineage4 2
lineage2.2.1;lineage4.9 1
lineage4.4 1
lineage4.3.3 1
lineage4.1.1.3 1
lineage4.1.2.1 3
lineage2.2.1.2 1
La1.4 1
lineage4.2.1 1
lineage4.2.2.1 2
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 87
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR4423165 Pre-XDR-TB lineage3.1.2.1 None
SRR25827577 MDR-TB lineage2.2.1.1 None
SRR16157048 Pre-XDR-TB lineage2.2.1 None
SRR25827440 XDR-TB lineage2.2.1;lineage3 None
ERR7911036 MDR-TB lineage2.2.1 md
SRR18715489 Pre-XDR-TB lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR11567812 Pre-XDR-TB lineage2.2.2 None
ERR4800562 Pre-XDR-TB lineage2.2.1.1 in
ERR4796823 MDR-TB lineage2.2.1.1 in
ERR4798809 Pre-XDR-TB lineage2.2.1 None
ERR4798091 MDR-TB lineage4.8 in
ERR2653199 Pre-XDR-TB lineage4.3.4.2 None
SRR1183054 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR25827693 MDR-TB lineage2.2.1.1;lineage3 None
ERR11798608 MDR-TB lineage2.2.1 None
SRR3082094 Pre-XDR-TB lineage1.1.2 None
ERR4769444 HR-TB lineage4.9 None
SRR3105774 MDR-TB lineage3 None
ERR2516576 MDR-TB lineage4 pe
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR4798326 MDR-TB lineage2.2.1.1 in
SRR1180413 Sensitive lineage4.9 None
ERR7975657 MDR-TB lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR16157047 Pre-XDR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
ERR4800573 Pre-XDR-TB lineage2.2.1 in
SRR25827490 XDR-TB lineage2.2.1 None
ERR4809358 RR-TB lineage2.2.1.1 za
ERR2706989 MDR-TB lineage4.3.4.2 cd
SRR28351269 Pre-XDR-TB lineage2.2.1 None
SRR28044344 Pre-XDR-TB lineage4.4 None
SRR28706439 Pre-XDR-TB lineage2.2.1 None
ERR11773740 Pre-XDR-TB lineage4.3.3 None
ERR2707209 MDR-TB lineage4.3.4.2 cd
ERR6359074 HR-TB lineage4.9 None
ERR4809037 Pre-XDR-TB lineage4.1.1.3 za
SRR25389454 Pre-XDR-TB lineage2.2.1.1 None
SRR7585432 Pre-XDR-TB lineage3 in
ERR9992776 MDR-TB lineage2.2.1 None
SRR25827792 XDR-TB lineage2.2.1 None
SRR5486878 MDR-TB lineage4.1.2.1 None
SRR25827367 MDR-TB lineage2.2.1.1 None
SRR16157050 MDR-TB lineage2.2.1 None
ERR4797965 XDR-TB lineage2.2.1 in
ERR10610353 Pre-XDR-TB lineage2.2.2 None
ERR4553710 MDR-TB lineage3.1.2.1 None
ERR5918014 MDR-TB lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR2516746 MDR-TB lineage3 gb
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
ERR4797191 XDR-TB lineage2.2.1 in
ERR4800394 Pre-XDR-TB lineage2.2.1.1 in
SRR1180355 Sensitive lineage4.9 None
ERR4799841 MDR-TB lineage2.2.1 in
SRR6153007 Sensitive lineage2.2.1 ca
ERR4798043 MDR-TB lineage4.8 in
SRR15465769 MDR-TB lineage2.2.1.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR144542 Pre-XDR-TB lineage2.2.1 ru
ERR9806662 Pre-XDR-TB lineage2.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR10869058 MDR-TB lineage2.2.1 None
SRR28498360 MDR-TB lineage4.2.1 None
ERR2516715 MDR-TB lineage4.2.2.1 nl
SRR8651615 Pre-XDR-TB lineage2.2.2 cn
ERR4800613 Pre-XDR-TB lineage2.2.1.1 None
ERR1873475 Pre-XDR-TB lineage4.1.2.1 za
ERR2041763 MDR-TB lineage4.2.2.1 rs
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180375 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
DRR130075 MDR-TB lineage2.2.1 None
ERR9992830 XDR-TB lineage2.2.1 None
ERR4797800 MDR-TB lineage4.8 in
SRR6256972 Pre-XDR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None