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SRA data
Rv0006
- c.-227T>G
Drug resistance types
0 Sensitive
1 RR-TB
18 HR-TB
16 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
12
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage4.9
3
lineage4.9;lineage9
2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
1
lineage2.1;lineage4.9;lineage6.3;lineage8
1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
1
lineage2.1;lineage2.2;lineage6.3
1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
1
La2;lineage4.9;lineage9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
35
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR3077978
RR-TB
lineage1.1
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
ERR3283017
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
None
ERR3797016
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4188342
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR502524
HR-TB
lineage4.9;lineage6.3
None
ERR5311078
MDR-TB
M.canetti;lineage2.1;lineage4.9;lineage6.3
None
Showing 1 to 10 of 35 entries
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