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SRA data
Rv0006
- c.-341G>A
Drug resistance types
2 Sensitive
1 RR-TB
9 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
lineage1.1.1
2
La3;lineage4.9
2
La1.7;M.canetti;lineage4.9
2
M.canetti;lineage4.9;lineage9
1
La3;lineage2.1;lineage4.9
1
La2;lineage2.2
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
lineage4.9;lineage7
1
Showing 1 to 10 of 16 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
25
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR12328154
Other
lineage1.1.1.1;lineage2.2.1;lineage4.2.2
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR3283021
HR-TB
lineage4.9
None
ERR3445502
Sensitive
lineage4.9;lineage7
None
ERR3797047
MDR-TB
lineage4.9
None
ERR4769521
RR-TB
lineage4.9
None
ERR4815441
HR-TB
lineage4.9
None
Showing 1 to 10 of 25 entries
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