Rv0006 - c.496_498delCTAinsTG
Drug resistance types
7 Sensitive
5 RR-TB
14 HR-TB
21 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 3 |
| lineage4.9 | 25 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage4.5 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.8 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 1 | |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 64 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6046245 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4811031 | Other | lineage4.5 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6046594 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4811030 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR987722 | MDR-TB | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
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