Rv0010c - c.-348C>T
Drug resistance types
4 Sensitive
0 RR-TB
4 HR-TB
26 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.1 | 7 |
| M.canetti;lineage4.2 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage1.1.2 | 2 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.2.1;lineage4.3.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| lineage2.2.1;lineage3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 4 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.4.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 3 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830722 | Pre-XDR-TB | lineage4.3.1 | dz | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR2517603 | Sensitive | lineage4.3.1 | nl | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR28351463 | Sensitive | lineage1.1.2 | None | ERR4830732 | MDR-TB | lineage4.3.1 | dz | ERR3275260 | Sensitive | lineage4.3.1 | nl | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR2515622 | Pre-XDR-TB | lineage4.3.2.1;lineage4.3.3 | za | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR25827720 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR2446343 | Sensitive | lineage4.3.1 | nl | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6855822 | Pre-XDR-TB | lineage4.3.2.1;lineage4.3.3 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR4830734 | MDR-TB | lineage4.3.1 | dz | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4830672 | MDR-TB | lineage4.3.1 | dz | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR25827674 | XDR-TB | lineage2.2.1.1;lineage3 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR25827676 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797762 | Pre-XDR-TB | lineage2.2.1 | in | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR4815407 | Other | lineage1.1.2 | gb | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR25827685 | XDR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
|---|
