Rv0668 - c.-534C>G


Drug resistance types
171 Sensitive 9 RR-TB 51 HR-TB 33 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 78 Other
lineage Counts
lineage Count
35
La1.8.1 38
lineage4.3.3 13
lineage6.3.1 2
lineage4.8 8
lineage4.1.2.1 13
lineage2.2.1;lineage2.1 1
lineage3.1 3
lineage2.2.1 39
lineage4.2.1 1
lineage4.3 1
lineage4.6.1.1 10
lineage4.9 21
lineage3 27
lineage5 1
lineage3.1.3 1
lineage4.3.4.2.1 8
lineage3.1.1 3
lineage4.1.1.3 6
lineage4.1;lineage1.1.1.1 1
lineage4.3.4.2 1
lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 1
lineage4.6.1.2 2
lineage4.3.4.1;lineage1.1.2 1
lineage4.3.4.2.1;lineage1.1.3 1
lineage4.2.2.2 1
lineage4.1.1 6
lineage3.1.2 6
lineage4.4.1.1 9
lineage1.1.2 5
lineage4.1.1.3.1 1
lineage4.6.2 1
lineage2.2.2 15
lineage4.7 1
lineage4 2
lineage4.3.2 1
lineage2.1 2
lineage5.1.1 3
lineage2.2.1.2 4
lineage4.4.1.2 1
La1.7.1 22
lineage4.4.2 1
lineage4.1 1
lineage1.1.1 1
lineage7 3
lineage4.6.1 4
lineage2.2.1.1 2
lineage4.3.2.1 12
lineage5.1.4 1
lineage4.1.2 3
La1.2.BCG 1
lineage4.4.1.1.1 1
lineage4.3.2.1;lineage3.1.1 1
lineage4.9.1 1
lineage4.3.4.1 2
lineage1.1.3.2 3
lineage2 1
lineage4.4.1.1;lineage2.2.1 1
lineage4.1.3 1
lineage4.1.2.1;lineage2.2 1
lineage1.1 1
spoligotype Counts
spoligotype Count
None 360
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323036 HR-TB None
ERR5311099 HR-TB None
SRR8073606 Other La1.8.1 None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
SRR857283 MDR-TB lineage4.3.3 None
ERR323038 HR-TB None
SRR857280 MDR-TB lineage4.3.3 None
SRR857290 MDR-TB lineage4.3.3 None
SRR857287 MDR-TB lineage4.3.3 None
SRR857291 MDR-TB lineage4.3.3 None
SRR857286 MDR-TB lineage4.3.3 None
SRR857294 MDR-TB lineage4.3.3 None
SRR857300 MDR-TB lineage4.3.3 None
SRR857302 MDR-TB lineage4.3.3 None
ERR3183991 RR-TB lineage6.3.1 None
SRR857299 MDR-TB lineage4.3.3 None
SRR7645919 HR-TB lineage4.8 None
ERR323041 HR-TB None
SRR896604 Sensitive lineage4.1.2.1 None
SRR921502 Pre-XDR-TB lineage2.2.1;lineage2.1 None
ERR323055 HR-TB None
ERR323063 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR019553 MDR-TB lineage2.2.1 None
ERR019555 HR-TB lineage4.2.1 None
ERR019557 Pre-XDR-TB lineage2.2.1 None
ERR019558 Other lineage2.2.1 None
ERR025449 Sensitive lineage4.3 None
ERR027463 Pre-XDR-TB lineage2.2.1 None
ERR028335 Sensitive lineage4.6.1.1 None
ERR027466 Sensitive lineage4.9 None
ERR028339 Sensitive lineage3 None
ERR028346 Sensitive lineage5 None
ERR028341 Sensitive lineage3.1.3 None
ERR028349 Sensitive lineage4.3.4.2.1 None
ERR028352 Sensitive lineage3.1.1 None
ERR028361 HR-TB lineage4.1.1.3 None
ERR028356 Sensitive lineage4.1;lineage1.1.1.1 None
ERR036198 Other lineage4.3.4.2 None
ERR036185 MDR-TB lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 None
ERR036194 Other lineage4.6.1.2 None
ERR037529 Other lineage4.3.4.2.1 None
ERR036233 Sensitive lineage4.3.4.1;lineage1.1.2 None
ERR036237 Sensitive lineage4.3.4.2.1 None
ERR037501 Sensitive lineage4.3.4.2.1 None
ERR036215 Other lineage4.8 None
ERR036224 HR-TB lineage4.3.4.2.1;lineage1.1.3 None
ERR038267 Sensitive lineage4.2.2.2 None
ERR046740 Sensitive lineage4.1.1 None
ERR046731 Sensitive lineage4.1.1 None
ERR038289 Other lineage4.3.3 None
ERR040092 Sensitive lineage3.1.1 None
ERR046801 Sensitive lineage3 None
ERR046750 Other La1.8.1 None
ERR046742 Sensitive lineage4.1.1 None
ERR046802 Sensitive lineage3.1.2 None
ERR046774 Other La1.8.1 None
ERR046805 Sensitive lineage3 None
ERR046810 Sensitive lineage3.1.2 None
ERR046812 Sensitive lineage3 None
ERR046806 Sensitive lineage3 None
ERR046803 Sensitive lineage3 None
ERR046807 Sensitive lineage3 None
ERR046814 Sensitive lineage3 None
ERR046809 Sensitive lineage3 None
ERR046811 Sensitive lineage3 None
ERR046804 Sensitive lineage3 None
ERR046813 Sensitive lineage3 None
ERR046816 Other lineage3.1.2 None
ERR046808 Sensitive lineage3 None
ERR046830 Sensitive lineage3.1.2 None
ERR046815 Sensitive lineage3.1.2 None
ERR046818 Sensitive lineage3.1.2 None
ERR046829 Sensitive lineage3 None
ERR046835 Sensitive lineage4.4.1.1 None
ERR046828 Sensitive lineage3 None
ERR046817 Sensitive lineage4.9 None
ERR046826 Sensitive lineage3 None
ERR046827 Sensitive lineage3 None
ERR046899 Sensitive lineage4.8 None
ERR046896 Sensitive lineage1.1.2 None
ERR046902 Sensitive lineage4.1.1.3 None
ERR046944 Pre-XDR-TB lineage4.8 None
ERR046931 Sensitive lineage4.1.1 None
ERR046909 Sensitive lineage4.9 None
ERR046977 MDR-TB lineage4.8 None
ERR046956 Sensitive lineage4.9 None
ERR046979 Sensitive lineage3 None
ERR046978 Sensitive lineage1.1.2 None
ERR046976 Sensitive lineage4.1.1 None
ERR046985 MDR-TB lineage4.1.1.3.1 None
ERR046987 Sensitive lineage3 None
ERR072061 Sensitive lineage3 None
ERR1161620 MDR-TB lineage2.2.1 None
ERR1035189 Sensitive lineage4.1.1 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1367678 Sensitive lineage4.4.1.1 None
ERR1213918 MDR-TB lineage4.6.2 None
ERR3283017 HR-TB None
ERR144568 Pre-XDR-TB None
ERR1367680 Sensitive lineage4.4.1.1 None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR4188350 HR-TB None
ERR6052073 MDR-TB lineage2.2.2 None
ERR4798139 Sensitive lineage1.1.2 None
ERR5987219 Pre-XDR-TB lineage2.2.2 None
ERR473341 Sensitive lineage4.1.1.3 None
ERR6358837 HR-TB None
ERR6052115 MDR-TB lineage2.2.2 None
ERR6879038 Sensitive lineage4.7 None
ERR6359066 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR841787 Other La1.8.1 None
ERR841491 Sensitive lineage4.4.1.1 None
ERR779675 Sensitive lineage4.1.1.3 None
ERR841490 Sensitive lineage4.4.1.1 None
ERR841493 Sensitive lineage2.1 None
ERR841494 Sensitive lineage5.1.1 None
ERR841495 Sensitive lineage5.1.1 None
ERR841796 Other La1.8.1 None
ERR841496 RR-TB lineage6.3.1 None
ERR841492 Sensitive lineage4.4.1.1 None
ERR841831 Other La1.8.1 None
ERR841795 Other La1.8.1 None
ERR841843 Other La1.8.1 None
ERR841839 Other La1.8.1 None
ERR841895 Other La1.8.1 None
ERR841893 Other La1.8.1 None
ERR8976043 HR-TB None
ERR894432 Sensitive lineage4.8 None
SRR034933 Sensitive lineage4.9 None
ERR979072 Sensitive lineage4.1.2.1 None
SRR034935 Sensitive lineage4.9 None
SRR034936 Sensitive lineage4.9 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR034934 Sensitive lineage4.9 None
SRR125286 HR-TB lineage2.2.2 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR121583 Sensitive lineage4.1.2.1 None
SRR121584 Sensitive lineage4.1.2.1 None
SRR125284 Sensitive lineage2.2.1.2 None
SRR1162740 Other lineage4.1.2.1 None
SRR1169272 MDR-TB lineage4.1.1.3 None
SRR121590 Sensitive lineage4.1.2.1 None
SRR125287 Sensitive lineage2.2.1 None
SRR125295 Sensitive lineage2.2.1 None
SRR125292 Sensitive lineage2.2.1 None
SRR125294 Sensitive lineage2.2.1 None
SRR125293 Sensitive lineage2.2.1 None
SRR125299 Sensitive lineage2.2.1 None
SRR125290 HR-TB lineage2.2.2 None
SRR125296 HR-TB lineage2.2.2 None
SRR125291 Sensitive lineage2.2.1 None
SRR125297 Sensitive lineage2.2.1 None
SRR125305 Sensitive lineage2.2.1.2 None
SRR125310 HR-TB lineage2.2.2 None
SRR125304 Sensitive lineage2.2.1 None
SRR125307 Sensitive lineage2.2.1.2 None
SRR125303 Sensitive lineage2.2.1 None
SRR125308 Sensitive lineage2.2.1 None
SRR125309 Sensitive lineage2.2.2 None
SRR158095 Sensitive lineage4.9 None
SRR125312 HR-TB lineage2.2.2 None
SRR125311 Sensitive lineage2.2.1 None
SRR14160052 Sensitive lineage4.4.1.2 None
SRR158091 Sensitive lineage4.9 None
SRR158090 Sensitive lineage4.9 None
SRR158092 Sensitive lineage4.9 None
SRR125300 Sensitive lineage2.2.1.2 None
SRR13861428 Other lineage4.9 None
SRR158094 Sensitive lineage4.9 None
SRR158096 Sensitive lineage4.9 None
SRR158093 Sensitive lineage4.9 None
SRR158097 Sensitive lineage4.9 None
SRR1640750 HR-TB None
SRR1791708 Other La1.7.1 None
SRR1791764 Other La1.8.1 None
SRR1791828 Other La1.8.1 None
SRR1791776 Other La1.7.1 None
SRR1791771 Other La1.8.1 None
SRR1791780 Other La1.8.1 None
SRR1791795 Other La1.8.1 None
SRR1791912 Other La1.8.1 None
SRR1791838 Other La1.8.1 None
SRR1791865 Other La1.8.1 None
SRR1791873 Other La1.8.1 None
SRR1791907 Other La1.8.1 None
SRR1792059 Other La1.8.1 None
SRR1791940 Other La1.8.1 None
SRR1792002 Other La1.7.1 None
SRR1792042 Other La1.8.1 None
SRR1791947 Other La1.8.1 None
SRR1791995 Other La1.8.1 None
SRR1792073 Other La1.7.1 None
SRR1792069 Other La1.8.1 None
SRR1792106 Other La1.8.1 None
SRR1792096 Other La1.8.1 None
SRR1792089 Other La1.8.1 None
SRR1792124 Other La1.8.1 None
SRR1792184 Other La1.7.1 None
SRR1792176 Other La1.8.1 None
SRR1792163 Other La1.7.1 None
SRR1792173 Other La1.7.1 None
SRR1792205 Other La1.7.1 None
SRR1792188 Other La1.7.1 None
SRR1792201 Other La1.7.1 None
SRR1792251 Other La1.7.1 None
SRR1792207 Other La1.7.1 None
SRR1792249 Other La1.7.1 None
SRR1792252 Other La1.8.1 None
SRR1792263 Other La1.7.1 None
SRR1792282 Other La1.8.1 None
SRR1792258 Other La1.7.1 None
SRR1792495 Other La1.7.1 None
SRR1792486 Other La1.7.1 None
SRR18213807 Sensitive lineage4.8 None
SRR1792506 Other La1.8.1 None
SRR1792499 Other La1.7.1 None
ERR5758367 Pre-XDR-TB lineage2.2.2 None
SRR185871 Sensitive lineage4.1.2.1 None
ERR9807015 Pre-XDR-TB lineage4.4.1.1 None
ERR5758346 Pre-XDR-TB lineage2.2.2 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR2100067 Other lineage4.3.3 None
SRR2100089 Sensitive lineage3 None
SRR2100120 Sensitive lineage3 None
ERR5758343 Pre-XDR-TB lineage2.2.1 None
ERR5758431 Pre-XDR-TB lineage2.2.2 None
SRR2467265 Sensitive lineage3 None
ERR5758437 MDR-TB lineage2.2.2 None
SRR2467264 Sensitive lineage4.4.2 None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR1199041 Sensitive lineage4.6.1.1 None
SRR3675482 HR-TB None
ERR1199058 Sensitive lineage4.6.1.1 None
ERR1198988 Sensitive lineage4.6.1.1 None
ERR161033 HR-TB None
SRR3675486 HR-TB None
ERR233363 Sensitive lineage1.1.1 None
ERR1200603 Sensitive lineage7 None
ERR1200618 Sensitive lineage7 None
ERR1199078 Sensitive lineage4.6.1 None
ERR1199053 Sensitive lineage4.6.1.1 None
ERR1199059 Sensitive lineage4.6.1 None
ERR1199020 Sensitive lineage4.6.1.1 None
SRR1723595_SRR1723596 Pre-XDR-TB lineage2.2.1 None
SRR1723698_SRR1723699 RR-TB lineage2.2.1.1 None
SRR3675312 HR-TB lineage4 None
SRR3675545 HR-TB None
ERR233346 Sensitive lineage7 None
ERR841400 Other lineage4.8 None
SRR4034060 Sensitive lineage4.3.2.1 None
SRR1723675_SRR1723674 Pre-XDR-TB lineage2.2.1 None
SRR3675558 HR-TB None
SRR3675571 HR-TB None
SRR4019488 Other La1.7.1 None
ERR218154 Sensitive lineage2.1 None
ERR4816656 HR-TB None
SRR1723693_SRR1723694 RR-TB lineage2.2.1.1 None
SRR4019487 Other La1.8.1 None
SRR4033524 Sensitive lineage4.3.2.1 None
SRR4019485 Other La1.7.1 None
SRR4033387 RR-TB lineage2.2.1 None
SRR4033396 Sensitive lineage2.2.1 None
SRR4019489 Other La1.7.1 None
SRR4019491 Other La1.7.1 None
SRR4033363 Sensitive lineage2.2.1 None
SRR4033422 Sensitive lineage4.3.2.1 None
ERR234145 Sensitive lineage5.1.4 None
SRR4035702 RR-TB lineage4.1.2 None
ERR234127 Sensitive lineage2.2.1 None
ERR234139 Sensitive lineage2.2.1 None
ERR234153 Sensitive lineage3 None
ERR234151 Other La1.2.BCG None
ERR234158 Sensitive lineage3.1 None
ERR234142 Sensitive lineage5.1.1 None
ERR234188 Sensitive lineage3 None
ERR234178 Sensitive lineage3 None
ERR234179 Sensitive lineage3 None
SRR4035857 Sensitive lineage4.3.2.1 None
ERR234212 Sensitive lineage4.9 None
SRR4035876 Sensitive lineage4.4.1.1.1 None
SRR4035871 Sensitive lineage4.3.2.1 None
SRR4035899 Sensitive lineage4.3.2.1 None
ERR1199044 Sensitive lineage4.6.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR1198994 Sensitive lineage4.6.1.1 None
SRR4037556 Sensitive lineage4.3.2.1 None
SRR4037588 Sensitive lineage4.3.2.1 None
ERR245716 Sensitive lineage2.2.1 None
ERR245795 Sensitive lineage4.3.2.1;lineage3.1.1 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR245740 Sensitive lineage4.1.2 None
ERR245801 Other lineage4.3.4.2.1 None
SRR4037705 Sensitive lineage4.4.1.1 None
ERR245810 Sensitive lineage4.9.1 None
ERR245809 Sensitive lineage4.3.4.1 None
ERR245820 Sensitive lineage1.1.3.2 None
ERR245816 Sensitive lineage4.1.2 None
ERR245815 Sensitive lineage4.3.4.2.1 None
ERR245817 Sensitive lineage1.1.3.2 None
ERR245819 Other lineage3.1.1 None
ERR245822 Other lineage1.1.3.2 None
SRR4037794 Sensitive lineage2.2.1 None
ERR245821 Other lineage4.3.4.2.1 None
SRR4037767 Sensitive lineage2 None
ERR245823 Sensitive lineage4.1.1.3 None
SRR4037757 RR-TB lineage4.4.1.1;lineage2.2.1 None
SRR4037906 Sensitive lineage4.3.2.1 None
ERR4818929 HR-TB None
ERR1199065 Sensitive lineage4.6.1 None
SRR413216 MDR-TB lineage2.2.1 None
SRR413213 RR-TB lineage2.2.1 None
SRR413221 RR-TB lineage2.2.1 None
SRR413224 MDR-TB lineage2.2.1 None
SRR413226 MDR-TB lineage2.2.1 None
ERR2516475 MDR-TB lineage4.1.3 None
SRR413266 MDR-TB lineage2.2.1 None
SRR413231 MDR-TB lineage2.2.1 None
ERR2516442 MDR-TB lineage4.1.2.1;lineage2.2 None
ERR233352 Sensitive lineage4.1.2.1 None
ERR2516527 Pre-XDR-TB lineage4.3.3 None
ERR841462 Sensitive lineage4.3.2.1 None
ERR2516626 Sensitive lineage4.3.4.1 None
ERR2516691 Sensitive lineage4.1.2.1 None
ERR2516712 MDR-TB lineage4.6.1.2 None
ERR2516522 MDR-TB lineage1.1.2 None
ERR1200628 Sensitive lineage4.1.2.1 None
SRR5817706 Other La1.8.1 None
ERR278594 HR-TB None
ERR2693239 HR-TB None
ERR1199010 Sensitive lineage4.6.1.1 None
ERR1199054 Sensitive lineage4.6.1.1 None
SRR6046514 HR-TB None
SRR6325442 HR-TB None
SRR6325444 HR-TB None
SRR5817715 Other La1.8.1 None
SRR6045952 HR-TB None
SRR6325448 HR-TB None
SRR611416 Pre-XDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
SRR314729 Sensitive lineage4.9 None
SRR611417 MDR-TB lineage2.2.1 None
SRR611425 Sensitive lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
SRR611426 MDR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
ERR495203 Sensitive lineage4.3.2.1 None
ERR4831532 MDR-TB lineage2.2.2 None
ERR4831533 Pre-XDR-TB lineage4.4.1.1 None
ERR501642 Sensitive lineage4.3.2.1 None
ERR294248 HR-TB None