Rv0668 - c.1204_1206delCTTinsTG


Drug resistance types
1 Sensitive 22 RR-TB 6 HR-TB 64 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 16 Other
lineage Counts
lineage Count
2
M.canetti;lineage2.1;lineage4.9 23
lineage4.9 13
lineage4.1.2.1 7
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.8.1 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2.1 4
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage6.3 1
lineage1.1 1
lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9 4
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1 1
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage4.9 1
La2;M.canetti 1
M.canetti;lineage2.2 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.1.1.3 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.7.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1640750 RR-TB None
ERR4796577 HR-TB None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1791696 RR-TB La1.8.1 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675494 RR-TB lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR6046492 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR3275220 Other lineage3 nl
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR13861381 HR-TB lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR266120 Other M.canetti None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5917710 RR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
ERR266126 Other La2;M.canetti None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR2517528 RR-TB lineage3 nl
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2446566 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR2446144 Other lineage3 nl
SRR6044815 RR-TB lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None