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SRA data
Rv0668
- c.3900C>G
Drug resistance types
3 Sensitive
0 RR-TB
10 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
9
La1.7;lineage4.9
3
La1.7;lineage4.9;lineage7
2
La3;M.canetti;lineage4.9
1
La1.7;lineage3.1;lineage4
1
lineage2.1;lineage4.1.4;lineage4.9
1
La1.7;lineage3;lineage4.9;lineage7
1
La1.7;M.canetti;lineage4.9
1
La1.7
1
M.canetti;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
22
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR3283040
HR-TB
lineage4.9
None
ERR3797015
HR-TB
lineage4.9
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR405219
HR-TB
La1.7;lineage3.1;lineage4
None
ERR473277
HR-TB
La3;M.canetti;lineage4.9
None
ERR4769474
HR-TB
lineage4.9
None
ERR4830353
Other
La1.7
None
SRR19295647
Sensitive
lineage4.9
None
Showing 1 to 10 of 22 entries
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