lineage | Count |
---|---|
lineage4.1.1 | 2 |
lineage2.2.1 | 49 |
lineage4.3.4.2 | 5 |
lineage4.3.3 | 18 |
lineage4.8 | 39 |
lineage2.1 | 2 |
lineage2.2.1.1 | 6 |
lineage3 | 6 |
lineage4.6.1.2 | 4 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage4 | 4 |
lineage4.1.1.1 | 1 |
lineage4.1.2.1 | 5 |
lineage4.3.4.1 | 4 |
lineage4.2.2.1 | 1 |
lineage2.2 | 1 |
lineage2.2.2 | 1 |
lineage1.2.2.2 | 3 |
lineage4.1.1.3 | 3 |
lineage4.6.2.2 | 1 |
lineage4.5;lineage2.2.1 | 1 |
lineage4.3.4.1;lineage4.1.2.1 | 1 |
lineage4.3.3;lineage2.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1 | 3 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 165 |
ID | Drug resistance | Lineage | Country iso2 | ERR4812984 | MDR-TB | lineage4.1.1 | pe | SAMEA2534509 | MDR-TB | lineage2.2.1 | uz | ERR552979 | MDR-TB | lineage4.3.4.2 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4813455 | MDR-TB | lineage4.3.3 | pe | SRR1166190 | Pre-XDR-TB | lineage4.8 | ro | ERR4813662 | MDR-TB | lineage4.3.3 | None | SAMEA2534551 | MDR-TB | lineage4.3.3 | uz | SRR1723851 | MDR-TB | lineage2.2.1 | cn | SRR11828985 | Pre-XDR-TB | lineage2.1 | th | SAMEA2535290 | Pre-XDR-TB | lineage2.2.1.1 | mm | SRR6824351 | RR-TB | lineage2.2.1 | cn | ERR7911144 | MDR-TB | lineage2.2.1 | vn | SRR1723654 | RR-TB | lineage2.2.1 | cn | SRR5709748 | Pre-XDR-TB | lineage2.1 | th | ERR4817721 | MDR-TB | lineage4.8 | gb | ERR775372 | MDR-TB | lineage4.3.3 | pe | ERR2510647 | Pre-XDR-TB | lineage3 | pk | ERR2510832 | MDR-TB | lineage4.8 | it | ERR4819070 | MDR-TB | lineage4.8 | gb | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6339637 | MDR-TB | lineage4.1.2.1;lineage2.2.1 | au | ERR2510536 | MDR-TB | lineage3 | None | SRR6824587 | MDR-TB | lineage2.2.1 | cn | SRR1166121 | MDR-TB | lineage4.8 | ro | ERR751465 | MDR-TB | lineage4 | pe | ERR8975013 | MDR-TB | lineage4.1.1.1 | None | ERR2677457 | MDR-TB | lineage2.2.1 | de | ERR2510420 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2510432 | Pre-XDR-TB | lineage4.1.2.1 | pk | ERR2510470 | Pre-XDR-TB | lineage3 | pk | SRR1723812 | MDR-TB | lineage2.2.1 | cn | ERR2516902 | MDR-TB | lineage4.3.3 | gb | ERR2653079 | MDR-TB | lineage4.3.4.1 | None | SAMEA2534420 | MDR-TB | lineage4.3.3 | uz | SRR1166094 | Pre-XDR-TB | lineage4.8 | ro | SAMN02414980 | MDR-TB | lineage2.2.1 | se | ERR2516551 | MDR-TB | lineage4.3.4.1 | nl | SRR6824546 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2515711 | MDR-TB | lineage4.1.2.1 | za | SRR6339651 | MDR-TB | lineage4.1.2.1 | au | ERR2516693 | Pre-XDR-TB | lineage4.1.1 | pe | ERR2516715 | MDR-TB | lineage4.2.2.1 | nl | SRR6824557 | MDR-TB | lineage2.2.1 | cn | ERR2516885 | MDR-TB | lineage4.3.3 | gb | SAMN02403508 | MDR-TB | lineage4.8 | None | SRR7341642 | MDR-TB | lineage4.8 | ro | SAMEA2533994 | MDR-TB | lineage4.3.4.2 | None | SRR23086708 | Pre-XDR-TB | lineage4.8 | None | SRR23086709 | Pre-XDR-TB | lineage4.8 | None | SRR23086707 | Pre-XDR-TB | lineage4.8 | None | SRR23086717 | Pre-XDR-TB | lineage4.8 | None | SRR23340074 | MDR-TB | lineage4.3.3 | None | ERR2653184 | MDR-TB | lineage4.3.4.1 | None | SRR23340027 | MDR-TB | lineage2.2 | None | ERR4827737 | MDR-TB | lineage2.2.1 | None | ERR2706959 | MDR-TB | lineage4.6.1.2 | cd | ERR4827670 | MDR-TB | lineage2.2.1 | None | ERR5987206 | MDR-TB | lineage2.2.1 | None | ERR4827834 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277284 | Pre-XDR-TB | lineage2.2.2 | None | ERR688020 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR751531 | MDR-TB | lineage4 | pe | ERR9120016 | MDR-TB | lineage2.2.1 | None | ERR9907792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9992821 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972250 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR3082124 | MDR-TB | lineage4.8 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6280195 | MDR-TB | lineage2.2.1 | cn | SRR23086704 | Pre-XDR-TB | lineage4.8 | None | ERR2864277 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4829880 | Pre-XDR-TB | lineage4.8 | it | ERR4829926 | Pre-XDR-TB | lineage4.8 | it | ERR4829107 | Pre-XDR-TB | lineage4.8 | None | ERR4829972 | MDR-TB | lineage3 | pk | ERR4829969 | MDR-TB | lineage3 | pk | ERR4829371 | Pre-XDR-TB | lineage4.8 | it | ERR4830165 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829396 | Pre-XDR-TB | lineage4.8 | None | ERR4829412 | Pre-XDR-TB | lineage4.8 | it | ERR4829568 | Pre-XDR-TB | lineage4.8 | it | ERR4829621 | Pre-XDR-TB | lineage4.8 | None | ERR4829602 | Pre-XDR-TB | lineage4.8 | it | ERR4829648 | Pre-XDR-TB | lineage4.8 | None | ERR4828870 | Pre-XDR-TB | lineage4.8 | None | ERR4829007 | Pre-XDR-TB | lineage2.2.1 | it | ERR4829789 | Pre-XDR-TB | lineage4.8 | it | ERR4829791 | Pre-XDR-TB | lineage4.8 | None | ERR4829795 | MDR-TB | lineage4.8 | None | ERR3148158 | RR-TB | lineage4.1.2.1 | mx | ERR4829002 | MDR-TB | lineage4.8 | it | SRR6356942 | MDR-TB | lineage4.3.3 | None | SRR23086726 | Pre-XDR-TB | lineage4.8 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1162843 | MDR-TB | lineage2.2.1 | None | SRR11972308 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4831528 | MDR-TB | lineage4.1.1.3 | None | SRR23086710 | Pre-XDR-TB | lineage4.8 | None | ERR4872126 | MDR-TB | lineage4.6.2.2 | None | SRR2024983 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7592369 | MDR-TB | lineage4.8 | None | SAMEA2533409 | MDR-TB | lineage4.3.3 | uz | SRR20969659 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969464 | MDR-TB | lineage4.5;lineage2.2.1 | None | SRR1166130 | MDR-TB | lineage4.8 | ro | SRR11972255 | MDR-TB | lineage3 | None | ERR10877874 | Pre-XDR-TB | lineage2.2.1 | None | ERR017786 | MDR-TB | lineage2.2.1 | None | ERR1034588 | Pre-XDR-TB | lineage1.2.2.2 | pk | ERR1034610 | Pre-XDR-TB | lineage1.2.2.2 | pk | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1034680 | Pre-XDR-TB | lineage4.3.4.1;lineage4.1.2.1 | co | ERR10877879 | MDR-TB | lineage2.2.1 | None | SRR23086728 | Pre-XDR-TB | lineage4.8 | None | SRR23086729 | Pre-XDR-TB | lineage4.8 | None | DRR130061 | MDR-TB | lineage2.2.1.1 | None | ERR019860 | MDR-TB | lineage2.2.1 | None | ERR1034990 | MDR-TB | lineage4.1.1.3 | za | ERR10465821 | MDR-TB | lineage2.2.1 | None | ERR10680192 | MDR-TB | lineage4.3.4.2 | None | ERR108498 | MDR-TB | lineage2.2.1 | ru | ERR11043374 | MDR-TB | lineage4.3.3 | None | ERR3273140 | MDR-TB | lineage2.2.1 | None | ERR11043439 | MDR-TB | lineage4.8 | None | ERR1193877 | MDR-TB | lineage4.3.4.2 | sl | ERR1199102 | MDR-TB | lineage4.6.1.2 | cd | ERR144586 | Pre-XDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR1193862 | Pre-XDR-TB | lineage4.3.3 | us | ERR1193901 | MDR-TB | lineage4.3.3 | tm | ERR4797269 | Pre-XDR-TB | lineage2.2.1 | in | ERR3287651 | MDR-TB | lineage4.3.3 | pe | ERR3794357 | MDR-TB | lineage2.2.1 | None | ERR4553683 | Pre-XDR-TB | lineage4 | None | ERR4553826 | MDR-TB | lineage2.2.1 | None | ERR4796805 | MDR-TB | lineage2.2.1 | in | ERR3287444 | MDR-TB | lineage4.3.3 | pe | ERR3639700 | Pre-XDR-TB | lineage4.3.3 | None | ERR3639780 | Pre-XDR-TB | lineage4.3.3 | None | ERR440680 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4812196 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4797831 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798631 | Pre-XDR-TB | lineage4.4.1.2 | in | ERR4799221 | MDR-TB | lineage1.1.2 | in | ERR4799449 | MDR-TB | lineage2.2.1 | in | ERR4800570 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800654 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865140 | MDR-TB | lineage4.2.1 | None | ERR5865082 | MDR-TB | lineage4.8 | None | ERR5865141 | MDR-TB | lineage4.2.1 | None | ERR5864690 | MDR-TB | lineage2.2.1 | None | ERR5864693 | MDR-TB | lineage2.2.1 | None | ERR5864694 | MDR-TB | lineage2.2.1 | None | ERR5864689 | MDR-TB | lineage2.2.1 | None | ERR5864692 | MDR-TB | lineage2.2.1 | None | ERR5864691 | MDR-TB | lineage2.2.1 | None | ERR5865142 | MDR-TB | lineage4.2.1 | None | ERR5865222 | MDR-TB | lineage2.2.1 | None | ERR5865221 | MDR-TB | lineage2.2.1 | None | ERR8976091 | MDR-TB | lineage2.2.1.1 | None | ERR5865220 | MDR-TB | lineage2.2.1 | None | ERR5865081 | MDR-TB | lineage4.8 | None | ERR751526 | MDR-TB | lineage4 | pe | SRR1723638 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02231166 | MDR-TB | lineage4.1 | ml |
---|