Rv0678 - c.198delG
Drug resistance types
33 Sensitive
3 RR-TB
2 HR-TB
59 MDR-TB
74 Pre-XDR-TB
7 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 4 |
| lineage2.2.2 | 16 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 65 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1 | 5 |
| lineage4.3.4.2 | 24 |
| lineage1.1.2 | 1 |
| lineage3 | 5 |
| lineage4.6 | 2 |
| lineage4.1.1.3 | 6 |
| lineage4.1.2;lineage2.2.1.1 | 1 |
| lineage4.9 | 27 |
| lineage3.1 | 2 |
| lineage4.5 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.7 | 10 |
| lineage4.3.3 | 5 |
| lineage1.2.2 | 1 |
| lineage4.2.2.2;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 184 |
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045105 | Sensitive | lineage1.2.2.2 | None | ERR4830504 | Pre-XDR-TB | lineage2.2.2 | None | ERR3148169 | Pre-XDR-TB | lineage4.1.2.1 | mx | ERR4831536 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800309 | XDR-TB | lineage4.2.2.2 | in | SRR6650291 | Sensitive | lineage4.1.1 | None | ERR4831548 | MDR-TB | lineage2.2.1 | None | ERR4831535 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872319 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831746 | MDR-TB | lineage2.2.1 | None | ERR2984797 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4872312 | MDR-TB | lineage2.2.1 | None | ERR4817772 | MDR-TB | lineage1.1.2 | gb | SRR7724371 | MDR-TB | lineage3 | None | SRR9971308 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819964 | Sensitive | lineage4.6 | gb | SRR9971141 | MDR-TB | lineage2.2.1 | None | ERR1034633 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR10748257 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748129 | MDR-TB | lineage4.1.1.3 | None | ERR10748256 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748158 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748214 | MDR-TB | lineage2.2.1 | None | ERR10748208 | MDR-TB | lineage2.2.1 | None | ERR10748325 | MDR-TB | lineage4.1.2;lineage2.2.1.1 | None | ERR10748276 | MDR-TB | lineage2.2.1 | None | ERR10748373 | MDR-TB | lineage2.2.1 | None | ERR10748353 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748529 | MDR-TB | lineage2.2.1 | None | ERR4553456 | MDR-TB | lineage4.9 | None | ERR3273150 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276868 | XDR-TB | lineage2.2.1 | None | ERR3957930 | Sensitive | lineage4.1.1 | None | ERR4831769 | MDR-TB | lineage2.2.1 | vn | ERR4553726 | MDR-TB | lineage1.2.2.2 | None | ERR4831752 | MDR-TB | lineage2.2.1 | vn | ERR4832017 | MDR-TB | lineage2.2.1 | vn | ERR4831923 | MDR-TB | lineage2.2.1 | vn | SRR17658028 | RR-TB | lineage4.1.2.1 | None | SRR16088066 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515301 | Pre-XDR-TB | lineage2.2.1 | za | ERR4831816 | MDR-TB | lineage2.2.1 | None | ERR4829129 | HR-TB | lineage3.1 | None | ERR4799951 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799980 | XDR-TB | lineage2.2.1 | None | ERR4831491 | Pre-XDR-TB | lineage4.5 | None | ERR5979567 | Sensitive | lineage4.9 | None | ERR8975740 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4800547 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976044 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975779 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975669 | MDR-TB | lineage2.2.1 | None | ERR5918014 | MDR-TB | lineage2.2.1 | None | ERR5979544 | Sensitive | lineage4.9 | None | ERR5979561 | Sensitive | lineage4.9 | None | ERR5979572 | Sensitive | lineage4.9 | None | ERR5979562 | Sensitive | lineage4.9 | None | ERR5979569 | Sensitive | lineage4.9 | None | ERR5979564 | Sensitive | lineage4.9 | None | ERR5979606 | Sensitive | lineage4.9 | None | ERR5979782 | Sensitive | lineage4.9 | None | ERR5979604 | Sensitive | lineage4.9 | None | ERR5979648 | Sensitive | lineage4.9 | None | ERR5979615 | Sensitive | lineage4.9 | None | ERR5979618 | Sensitive | lineage4.9 | None | ERR5979622 | Sensitive | lineage4.9 | None | ERR5979789 | Other | lineage4.9 | None | ERR5979729 | Sensitive | lineage4.9 | None | ERR5979779 | Sensitive | lineage4.9 | None | ERR688026 | MDR-TB | lineage3 | None | ERR5979795 | Sensitive | lineage4.9 | None | ERR5979822 | Sensitive | lineage4.9 | None | ERR6358781 | MDR-TB | lineage4.3.4.2.1 | None | ERR5979808 | Sensitive | lineage4.9 | None | ERR5979810 | Sensitive | lineage4.9 | None | ERR5979849 | Sensitive | lineage4.9 | None | ERR7737669 | MDR-TB | lineage2.2.1 | None | SRR17657983 | MDR-TB | lineage2.2.1 | None | ERR9992757 | MDR-TB | lineage2.2.1 | None | ERR9992690 | MDR-TB | lineage2.2.2 | None | ERR9992763 | Pre-XDR-TB | lineage2.2.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9992710 | XDR-TB | lineage2.2.1 | None | ERR9992788 | RR-TB | lineage2.2.1 | None | ERR9992775 | MDR-TB | lineage2.2.2 | None | ERR9992830 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992819 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992844 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992820 | MDR-TB | lineage2.2.2 | None | ERR9992851 | XDR-TB | lineage4.1.1 | None | ERR9992845 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992895 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992869 | Pre-XDR-TB | lineage4.1.1 | None | ERR9992877 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992969 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992910 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992913 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9993155 | XDR-TB | lineage2.2.1 | None | ERR9993051 | MDR-TB | lineage2.2.1 | None | ERR9993052 | MDR-TB | lineage4.1.1.3 | None | ERR9993091 | RR-TB | lineage2.2.1 | None | ERR9993225 | Pre-XDR-TB | lineage4.3.2 | None | ERR9993218 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11567804 | Pre-XDR-TB | lineage2.2.2 | None | SRR10379886 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048963 | MDR-TB | lineage2.2.1 | None | SRR1146374 | MDR-TB | lineage4.7 | None | SRR1146382 | MDR-TB | lineage4.7 | None | ERR9993221 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993255 | Pre-XDR-TB | lineage4.1.1 | None | SRR1013579 | MDR-TB | lineage2.2.1 | None | SRR1013580 | MDR-TB | lineage2.2.1 | None | SRR1048962 | MDR-TB | lineage2.2.1 | None | SRR1144727 | MDR-TB | lineage4.7 | None | SRR1144829 | MDR-TB | lineage4.7 | None | SRR1163320 | MDR-TB | lineage4.7 | None | SRR1162810 | MDR-TB | lineage4.7 | None | SRR1166923 | MDR-TB | lineage4.7 | None | SRR1163361 | MDR-TB | lineage4.7 | None | SRR11638839 | Pre-XDR-TB | lineage3 | None | SRR16186844 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173023 | MDR-TB | lineage4.3.3 | None | SRR1184315 | MDR-TB | lineage4.3.3 | None | SRR11871434 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972320 | Sensitive | lineage4.5 | None | SRR12212956 | Sensitive | lineage4.9 | None | SRR12212955 | Sensitive | lineage4.9 | None | SRR14802216 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173324 | MDR-TB | lineage4.3.3 | None | SRR11871413 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196484 | MDR-TB | lineage4.3.3 | None | SRR1368338 | Pre-XDR-TB | lineage2.2.1 | None | SRR14088372 | HR-TB | lineage3.1 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295827 | Sensitive | lineage2.2.1 | None | SRR24710145 | Pre-XDR-TB | lineage2.2.1 | None | SRR19976647 | Sensitive | lineage4.9 | None | SRR16370603 | MDR-TB | lineage2.2.1 | None | SRR24828612 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048559 | Sensitive | lineage3 | None | SRR12708403 | Pre-XDR-TB | lineage1.2.2 | None | ERR8025701 | Pre-XDR-TB | lineage2.2.2 | None | SRR22175219 | XDR-TB | lineage4.2.2.2;lineage2.2.1 | None | SRR23071982 | Sensitive | lineage4.9 | None | ERR8025614 | Pre-XDR-TB | lineage2.2.2 | None | ERR9806886 | MDR-TB | lineage2.2.1 | None | ERR1664637 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1815555 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664635 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664636 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR24828613 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034594 | MDR-TB | lineage3 | pk | ERR1664638 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664662 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664639 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664640 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664642 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664650 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664652 | Pre-XDR-TB | lineage4.3.4.2 | None | SAMN02586061 | MDR-TB | lineage4.3.3 | za | ERR1664660 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1035215 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035226 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035222 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR3742661 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034850 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034847 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034908 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5073555 | MDR-TB | lineage2.2.1 | vn | ERR1034885 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864241 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7911177 | MDR-TB | lineage2.2.1 | vn | SAMN02360569 | MDR-TB | lineage2.2.1 | kr | ERR275203 | Pre-XDR-TB | lineage4.3.4.2 | pt | SAMN02414909 | MDR-TB | lineage4.7 | se | SAMN02414910 | MDR-TB | lineage4.7 | se | ERR275230 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7911611 | Pre-XDR-TB | lineage2.2.1 | za | ERR4819819 | Sensitive | lineage4.6 | None |
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