TB-Profiler
Home
Upload
SRA data
Rv1644
- c.-116C>G
Drug resistance types
41 Sensitive
3 RR-TB
19 HR-TB
4 MDR-TB
13 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.1.1.1
72
lineage4.9
9
lineage2.2
3
lineage2.2.1
2
lineage2.2.1.2;lineage7
1
lineage4.8
1
lineage1.2.2.1;lineage4.1.1.1
1
La1;lineage4.9
1
lineage4.9;lineage7
1
Showing 1 to 9 of 9 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
91
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10748184
Pre-XDR-TB
lineage4.1.1.1
None
ERR10748302
MDR-TB
lineage4.1.1.1
None
ERR10748455
MDR-TB
lineage4.1.1.1
None
ERR10748548
Pre-XDR-TB
lineage4.1.1.1
None
ERR11049414
Sensitive
lineage4.1.1.1
None
ERR11050229
Sensitive
lineage4.1.1.1
None
ERR11488901
RR-TB
lineage4.1.1.1
None
ERR12015087
Sensitive
lineage4.1.1.1
None
ERR12015088
Sensitive
lineage4.1.1.1
None
ERR13288829
HR-TB
lineage4.1.1.1
None
Showing 1 to 10 of 91 entries
Previous
1
2
3
4
5
…
10
Next