Rv1819c - c.1426C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
127 Sensitive
1 RR-TB
9 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.1.2 | 120 |
| lineage4.3.4.1;lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.2.1.1;lineage6.1.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| 6 | |
| lineage6 | 5 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.2.2;lineage6.1.2 | 1 |
| lineage2.2.1 | 2 |
| lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage6.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9787219 | Sensitive | lineage6.1.2 | None | ERR3804145 | Sensitive | lineage6.1.2 | None | ERR4192355 | Sensitive | lineage6.1.2 | None | ERR9786903 | Sensitive | lineage4.3.4.1;lineage4.6.2.2;lineage6.1.2 | None | ERR9787224 | Sensitive | lineage6.1.2 | None | ERR3806460 | Sensitive | lineage6.1.2 | None | ERR4829564 | Sensitive | lineage6.1.2 | it | ERR9787181 | Sensitive | lineage6.1.2 | None | ERR4814941 | Sensitive | lineage6.1.2 | gb | ERR4815111 | Sensitive | lineage6.1.2 | gb | ERR4816846 | Sensitive | lineage6.1.2 | gb | ERR4818775 | Sensitive | lineage6.1.2 | gb | ERR4820566 | Sensitive | lineage6.1.2 | gb | ERR4821774 | Sensitive | lineage6.1.2 | gb | ERR4822180 | Sensitive | lineage6.1.2 | gb | ERR9787124 | Sensitive | lineage6.1.2 | None | ERR9787248 | Sensitive | lineage6.1.2 | None | ERR3801365 | Sensitive | lineage6.1.2 | None | ERR234255 | Sensitive | lineage6.1.2 | gm | ERR3806842 | Sensitive | lineage6.1.2 | None | ERR9787387 | Sensitive | lineage6.1.2 | None | ERR1023244 | Sensitive | lineage6.1.2 | None | SRR29126182 | Sensitive | lineage6.1.2 | None | ERR9787088 | Sensitive | lineage6.1.2 | None | ERR9787276 | Sensitive | lineage6.1.2 | None | ERR11067470 | Sensitive | lineage6.1.2 | None | ERR4818574 | Sensitive | lineage6.1.2 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR3801361 | Sensitive | lineage6.1.2 | None | ERR1023293 | Other | lineage6.1.2 | None | ERR031478 | Sensitive | lineage2.2.1.1;lineage6.1.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR9787144 | Sensitive | lineage6.1.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR031480 | Sensitive | lineage6.1.2 | None | SRR21690414 | Sensitive | lineage6.1.2 | None | ERR3804023 | Sensitive | lineage6.1.2 | None | SRR7131190 | Sensitive | lineage6.1.2 | None | ERR3803784 | Sensitive | lineage6.1.2 | None | ERR4819688 | Sensitive | lineage6.1.2 | None | SRR29341571 | Sensitive | lineage6.1.2 | None | ERR3806661 | Sensitive | lineage6.1.2 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR9787374 | Sensitive | lineage6.1.2 | None | ERR9787216 | Sensitive | lineage6.1.2 | None | ERR4816999 | Other | None | ERR4811105 | HR-TB | None | ERR3801613 | Sensitive | lineage6.1.2 | None | ERR3804148 | Sensitive | lineage6.1.2 | None | ERR4811142 | RR-TB | None | ERR4811311 | Other | None | ERR9787051 | Sensitive | lineage6.1.2 | None | SRR29126266 | Sensitive | lineage6.1.2 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR9787281 | Sensitive | lineage6.1.2 | None | ERR9787335 | Sensitive | lineage6 | None | ERR9787033 | Sensitive | lineage6 | None | ERR4818968 | Sensitive | lineage6.1.2 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9787069 | Sensitive | lineage6.1.2 | None | ERR9787295 | Sensitive | lineage6.1.2 | None | ERR3803779 | Sensitive | lineage6.1.2 | None | ERR9787068 | Sensitive | lineage6.1.2 | None | ERR11043323 | Sensitive | lineage4.2.2;lineage6.1.2 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR4815035 | Sensitive | lineage6.1.2 | None | ERR9787212 | Sensitive | lineage6.1.2 | None | ERR3806656 | Sensitive | lineage6.1.2 | None | SRR19304094 | Other | lineage6 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR9117709 | Other | None | ERR9787293 | Sensitive | lineage6.1.2 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR9787136 | Sensitive | lineage6.1.2 | None | ERR9787246 | Sensitive | lineage6.1.2 | None | ERR4818479 | Sensitive | lineage6.1.2 | None | ERR3799578 | Sensitive | lineage6.1.2 | None | ERR3804024 | Sensitive | lineage6.1.2 | None | ERR11044917 | Sensitive | lineage6.1.2 | None | ERR3806839 | Sensitive | lineage6.1.2 | None | ERR11068363 | Sensitive | lineage6.1.2 | None | ERR3806616 | Sensitive | lineage6.1.2 | None | ERR439986 | Sensitive | lineage6.1.2 | None | ERR3804129 | Sensitive | lineage6.1.2 | None | ERR4821738 | Sensitive | lineage6.1.2 | None | ERR4822226 | Sensitive | lineage6.1.2 | gb | ERR9787215 | Sensitive | lineage6.1.2 | None | ERR9787310 | Sensitive | lineage6.1.2 | None | ERR9787370 | Sensitive | lineage6.1.2 | None | ERR4815138 | Sensitive | lineage6.1.2 | None | ERR4816685 | Sensitive | lineage6.1.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR9787353 | Sensitive | lineage6.1.2 | None | SRR1173778 | Other | lineage4.9 | None | ERR2517594 | Sensitive | lineage6.1.2 | nl | ERR3803842 | Sensitive | lineage6.1.2 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3806630 | Sensitive | lineage6.1.2 | None | ERR9787025 | Sensitive | lineage6.1.2 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3803998 | Sensitive | lineage6.1.2 | None | ERR3806623 | Sensitive | lineage6.1.2 | None | ERR9787357 | Sensitive | lineage6.1.2 | None | ERR9787221 | Sensitive | lineage6.1.2 | None | ERR9787264 | Sensitive | lineage6.1.2 | None | ERR9787286 | Sensitive | lineage6.1.2 | None | ERR4821837 | Sensitive | lineage6.1.2 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR3803964 | Sensitive | lineage6.1.2 | None | ERR9787034 | Sensitive | lineage6.1.2 | None | ERR9787317 | Sensitive | lineage6.1.2 | None | ERR9787115 | Sensitive | lineage6.1.2 | None | ERR9787365 | Sensitive | lineage6.1.2 | None | ERR11067561 | Sensitive | lineage6.1.2 | None | ERR4815830 | Sensitive | lineage6.1.2 | None | SRR1196677 | Other | lineage2.2 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3806831 | Sensitive | lineage6.1.2 | None | ERR4821460 | Sensitive | lineage6.1.2 | None | ERR2446182 | Sensitive | lineage6.1.2 | nl | ERR3275195 | Sensitive | lineage6.1.2 | nl | ERR9786886 | Sensitive | lineage4.6.2.2;lineage6.1.2 | None | ERR9787043 | Sensitive | lineage6.1.2 | None | ERR3799576 | Sensitive | lineage6.1.2 | None | ERR3806657 | Sensitive | lineage6.1.2 | None | ERR9787114 | Sensitive | lineage6.1.2 | None | ERR4810741 | HR-TB | None | ERR9787238 | Sensitive | lineage6.1.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787364 | Sensitive | lineage6 | None | ERR9787327 | Sensitive | lineage6.1.2 | None | ERR4821451 | Other | lineage6.1 | None | ERR4821841 | Sensitive | lineage6.1.2 | None | ERR3806634 | Sensitive | lineage6.1.2 | None | ERR4820866 | Sensitive | lineage6.1.2 | None | SRR29126830 | Sensitive | lineage6.1.2 | None | ERR4818787 | Other | lineage6.1.2 | None | ERR1023227 | Sensitive | lineage6.1.2 | None | ERR9787309 | Sensitive | lineage6.1.2 | None | ERR13285651 | Sensitive | lineage6.1.2 | None | ERR3806626 | Sensitive | lineage6.1.2 | None | ERR3804168 | Sensitive | lineage6.1.2 | None | SRR29126972 | Sensitive | lineage6.1.2 | None | ERR3804035 | Sensitive | lineage6.1.2 | None | ERR9787138 | Sensitive | lineage6.1.2 | None | ERR9787294 | Sensitive | lineage6.1.2 | None | ERR9787368 | Sensitive | lineage6.1.2 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9787383 | Sensitive | lineage6.1.2 | None | ERR4819044 | Sensitive | lineage6.1.2 | None | ERR3803812 | Sensitive | lineage6.1.2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3806636 | Sensitive | lineage6.1.2 | None | ERR4817835 | Sensitive | lineage6.1.2 | None |
|---|
