Rv1819c - c.1650dupG


Drug resistance types
4 Sensitive 6 RR-TB 3 HR-TB 44 MDR-TB 105 Pre-XDR-TB 6 XDR-TB 1 Other
lineage Counts
lineage Count
lineage4.2.2.1 2
lineage4.1.2.1 10
lineage4.1.1.3 20
lineage4.4.2 2
lineage4.3.1 1
lineage4.6.2.2 1
lineage2.2.1 36
lineage4.3.3 32
lineage4.3.4.1 5
lineage3 3
lineage4.8 11
lineage4.3.4.2 7
lineage2.2.2 3
lineage4.2.1 7
lineage4.4.1.1 10
lineage4 3
lineage4.1.2.1;lineage4.8 1
lineage4.2.2.2 2
lineage4.3.2 3
lineage4.9 1
lineage4.1.1.3.1 1
lineage4.2.2 2
lineage2.2.1.1 3
lineage4.6.4 1
lineage4.1.2.1;lineage4.3.3;lineage4.9 1
lineage2.2.1.1;lineage3 1
spoligotype Counts
spoligotype Count
None 169
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR553245 Sensitive lineage4.2.2.1 de
ERR3287830 Pre-XDR-TB lineage4.1.2.1 pe
ERR1873392 Pre-XDR-TB lineage4.1.1.3 None
SRR12062528 Pre-XDR-TB lineage4.4.2 None
ERR3014593 Pre-XDR-TB lineage4.3.1 tn
ERR10680141 MDR-TB lineage4.6.2.2 None
ERR11081826 RR-TB lineage4.1.2.1 None
ERR8025751 Pre-XDR-TB lineage2.2.1 None
SRR13870379 Pre-XDR-TB lineage4.3.3 None
ERR973455 RR-TB lineage4.3.4.1 None
SAMN02419661 Pre-XDR-TB lineage4.3.3 by
SRR671815 Pre-XDR-TB lineage2.2.1 cn
SRR11662248 MDR-TB lineage2.2.1 None
ERR9806984 Pre-XDR-TB lineage2.2.1 None
SRR25827384 Sensitive lineage3 None
SRR2100132 Pre-XDR-TB lineage4.8 None
ERR047891 Pre-XDR-TB lineage4.8 None
SRR1181042 MDR-TB lineage2.2.1 None
ERR4813215 Pre-XDR-TB lineage4.3.3 None
ERR3287619 MDR-TB lineage4.3.4.2 pe
ERR11488954 XDR-TB lineage4.1.1.3 None
ERR4813863 MDR-TB lineage4.3.3 br
SRR16156779 Pre-XDR-TB lineage4.1.1.3 None
SRR24673508 Pre-XDR-TB lineage2.2.1 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
SRR16156791 Pre-XDR-TB lineage4.1.1.3 None
ERR4796827 RR-TB lineage2.2.1 in
SRR1165213 Pre-XDR-TB lineage2.2.2 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR3742664 Pre-XDR-TB lineage2.2.1 None
ERR11798713 Pre-XDR-TB lineage4.2.1 None
ERR4813848 Pre-XDR-TB lineage4.4.1.1 None
SRR1163140 Pre-XDR-TB lineage4.3.3 None
ERR9806983 Pre-XDR-TB lineage2.2.1 None
ERR4972528 Pre-XDR-TB lineage4.3.3 None
ERR9992784 XDR-TB lineage2.2.2 None
SAMN02586083 MDR-TB lineage2.2.1 za
ERR4813855 Pre-XDR-TB lineage4.3.3 br
ERR4813109 MDR-TB lineage4 pe
SRR28393389 Pre-XDR-TB lineage4.1.2.1 None
SRR28393321 MDR-TB lineage4.3.3 None
SRR28393588 MDR-TB lineage4.1.2.1;lineage4.8 None
ERR3335750 Pre-XDR-TB lineage3 pk
ERR2041729 Pre-XDR-TB lineage4.2.2.1 rs
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
ERR072083 Pre-XDR-TB lineage4.8 None
ERR4830805 MDR-TB lineage4.2.2.2 et
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
ERR4813820 Pre-XDR-TB lineage4.3.2 None
SRR9224916 Pre-XDR-TB lineage4.3.4.2 None
ERR2516619 Pre-XDR-TB lineage4.3.3 pe
ERR8025660 Pre-XDR-TB lineage2.2.1 None
ERR1035359 Pre-XDR-TB lineage4.3.4.1 br
SRR10315463 MDR-TB lineage4.4.1.1 None
ERR8665682 Pre-XDR-TB lineage4.3.3 None
SRR13736074 Sensitive lineage4.9 None
SRR14781924 Pre-XDR-TB lineage2.2.1 None
ERR5865036 Pre-XDR-TB lineage2.2.1 None
ERR1035271 Pre-XDR-TB lineage4.3.4.2 br
ERR8025655 Pre-XDR-TB lineage2.2.1 None
SRR23311047 Pre-XDR-TB lineage4.2.1 None
SRR22536489 MDR-TB lineage4.3.3 None
ERR973456 RR-TB lineage4.3.4.1 None
SRR19276609 MDR-TB lineage4.3.2 None
SRR16156780 Pre-XDR-TB lineage4.1.1.3 None
ERR4830480 MDR-TB lineage4.8 za
ERR046917 Pre-XDR-TB lineage4.1.1.3.1 gb
SRR23340052 Pre-XDR-TB lineage4.3.3 None
ERR4813694 Pre-XDR-TB lineage4.3.3 None
SRR1168987 Pre-XDR-TB lineage4.3.3 None
SRR21277547 Sensitive lineage4.2.2 None
SRR13232605 MDR-TB lineage2.2.1 None
SRR14801458 Pre-XDR-TB lineage4.2.1 None
ERR11069028 MDR-TB lineage4.1.2.1 None
ERR4800371 MDR-TB lineage2.2.1.1 in
SRR1180316 MDR-TB lineage2.2.1 None
ERR1035363 Pre-XDR-TB lineage4.6.4 br
ERR4813836 Pre-XDR-TB lineage4.3.4.2 None
ERR4810467 Pre-XDR-TB lineage2.2.1 cn
SRR1180385 MDR-TB lineage2.2.1 None
SRR16156859 Pre-XDR-TB lineage4.1.1.3 None
ERR4813842 HR-TB lineage4.3.4.1 None
ERR7737778 MDR-TB lineage2.2.1.1 None
SRR12062527 Pre-XDR-TB lineage4.4.2 None
SRR7755762 Pre-XDR-TB lineage4.2.1 None
ERR4798443 Pre-XDR-TB lineage2.2.1 in
ERR8025508 Pre-XDR-TB lineage4.1.1.3 None
ERR7911010 MDR-TB lineage4.3.2 pe
ERR5865035 Pre-XDR-TB lineage2.2.1 None
SRR1163341 Pre-XDR-TB lineage4.3.3 None
ERR3287832 HR-TB lineage4.3.3 pe
ERR1873531 Pre-XDR-TB lineage4.1.1.3 za
ERR5866437 Pre-XDR-TB lineage2.2.1 None
SRR16156800 Pre-XDR-TB lineage4.1.1.3 None
SRR7781508 XDR-TB lineage4.1.2.1 None
SRR7653027 Pre-XDR-TB lineage2.2.1 None
ERR4813823 Pre-XDR-TB lineage4.4.1.1 None
ERR8665594 Pre-XDR-TB lineage4.3.3 None
ERR4828115 MDR-TB lineage2.2.1 None
ERR8975512 XDR-TB lineage4.4.1.1 None
SRR7755671 Pre-XDR-TB lineage4.2.1 None
SRR6785352 HR-TB lineage4.1.2.1;lineage4.3.3;lineage4.9 None
SRR1172299 Pre-XDR-TB lineage4.3.3 None
ERR2307521 Pre-XDR-TB lineage2.2.1 None
ERR4829977 RR-TB lineage2.2.1.1;lineage3 pk
ERR4828779 Pre-XDR-TB lineage2.2.1 None
SRR10315554 Pre-XDR-TB lineage4.3.3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315474 MDR-TB lineage4.8 None
ERR4813053 MDR-TB lineage4.3.3 None
ERR2515304 Pre-XDR-TB lineage2.2.1 za
ERR8665681 Pre-XDR-TB lineage4.3.3 None
ERR4830499 MDR-TB lineage4.4.1.1 za
ERR8665921 Pre-XDR-TB lineage4.3.3 None
SRR11349192 Pre-XDR-TB lineage4.3.3 None
ERR1873391 Pre-XDR-TB lineage4.1.1.3 None
ERR046903 Pre-XDR-TB lineage4.8 gb
SRR1183968 MDR-TB lineage2.2.1 None
ERR4798841 Pre-XDR-TB lineage2.2.1 None
ERR1035037 MDR-TB lineage4.1.1.3 za
ERR1163058 MDR-TB lineage4.8 None
SRR10869101 MDR-TB lineage2.2.1.1 None
ERR2653195 Pre-XDR-TB lineage4.4.1.1 None
SRR15901693 Pre-XDR-TB lineage2.2.1 None
SRR10315476 MDR-TB lineage4.8 None
ERR4797962 XDR-TB lineage4.1.1.3 in
SRR10869197 Pre-XDR-TB lineage4.1.1.3 None
SRR16509481 MDR-TB lineage4.3.3 None
SRR13870404 Pre-XDR-TB lineage4.3.3 None
ERR046944 Pre-XDR-TB lineage4.8 None
ERR5979454 Pre-XDR-TB lineage3 None
SRR1367217 Pre-XDR-TB lineage2.2.1 None
SRR22536482 MDR-TB lineage4.3.3 None
ERR2510729 Pre-XDR-TB lineage4.1.2.1 it
ERR4813038 MDR-TB lineage4.1.2.1 pe
ERR2653083 Pre-XDR-TB lineage4.3.3 None
ERR046922 Other lineage4.2.2 gb
ERR751548 Pre-XDR-TB lineage4.3.3 pe
ERR4830490 MDR-TB lineage4.4.1.1 za
ERR8975031 MDR-TB lineage2.2.1 None
ERR973457 RR-TB lineage4.3.4.1 None
ERR046796 Pre-XDR-TB lineage4.8 gb
ERR3287581 MDR-TB lineage4 pe
SRR7829582 Pre-XDR-TB lineage4.1.2.1 None
ERR751562 Pre-XDR-TB lineage4.3.3 pe
SRR7755664 Pre-XDR-TB lineage4.2.1 None
ERR4813314 Pre-XDR-TB lineage4.3.4.2 None
ERR4830781 Pre-XDR-TB lineage4.1.2.1 et
ERR9806910 Pre-XDR-TB lineage4.1.1.3 None
ERR2653146 Pre-XDR-TB lineage4.3.3 None
ERR067605 Pre-XDR-TB lineage2.2.1 ru
ERR4830785 Pre-XDR-TB lineage4.2.2.2 et
ERR5866436 Pre-XDR-TB lineage2.2.1 None
SRR9971027 MDR-TB lineage4.4.1.1 None
ERR2516733 MDR-TB lineage2.2.1 pe
ERR4828788 XDR-TB lineage4.1.2.1 None
ERR2653115 Pre-XDR-TB lineage4.3.3 None
ERR11488733 MDR-TB lineage4.1.1.3 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR28393594 Pre-XDR-TB lineage2.2.1 None
ERR751593 Pre-XDR-TB lineage4.3.4.2 pe
SRR13870364 Pre-XDR-TB lineage4 None
SRR7646041 Pre-XDR-TB lineage4.2.1 None
SRR9971337 MDR-TB lineage4.8 None
ERR4813666 MDR-TB lineage4.3.4.2 None
SRR1173213 Pre-XDR-TB lineage4.1.1.3 None
SRR1167276 Pre-XDR-TB lineage2.2.2 None
SRR8346382 Pre-XDR-TB lineage2.2.1 None