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SRA data
Rv1819c
- c.1650dupG
Drug resistance types
4 Sensitive
7 RR-TB
4 HR-TB
54 MDR-TB
122 Pre-XDR-TB
11 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
45
lineage4.3.3
37
lineage4.1.1.3
25
lineage4.1.2.1
15
lineage4.8
13
lineage4.4.1.1
10
lineage4.3.4.2
9
lineage4.2.1
7
lineage4.3.4.1
5
lineage3
5
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
204
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR046796
Pre-XDR-TB
lineage4.8
gb
ERR046903
Pre-XDR-TB
lineage4.8
gb
ERR046917
Pre-XDR-TB
lineage4.1.1.3.1
gb
ERR046922
Other
lineage4.2.2
gb
ERR046944
Pre-XDR-TB
lineage4.8
None
ERR047891
Pre-XDR-TB
lineage4.8
None
ERR067605
Pre-XDR-TB
lineage2.2.1
ru
ERR072083
Pre-XDR-TB
lineage4.8
None
ERR1035037
MDR-TB
lineage4.1.1.3
za
ERR1035271
Pre-XDR-TB
lineage4.3.4.2
br
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