Rv1918c - c.1722_1799delAGCGCTAGGTGCGTTCAATCTGCCGACGCTGAGTATTCCGTCGGTGACGGTTCCGCCGATCACGATTCCGGCTGGCAC
Drug resistance types
52 Sensitive
5 RR-TB
2 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 12 |
| lineage4.5 | 2 |
| lineage4.6 | 2 |
| lineage3 | 8 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1 | 4 |
| lineage2.2.1 | 2 |
| lineage2.1 | 1 |
| lineage2 | 1 |
| lineage4.3.2.1 | 5 |
| lineage4.3.3 | 7 |
| lineage4.4.2 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.1 | 5 |
| lineage2.2.2 | 1 |
| lineage5.1.1 | 5 |
| lineage4.1 | 1 |
| lineage4.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13180286 | Sensitive | lineage4.8 | None | SRR13180264 | Sensitive | lineage4.5 | None | SRR13180267 | Sensitive | lineage4.5 | None | SRR16058108 | Sensitive | lineage4.6 | None | SRR13180290 | Sensitive | lineage4.8 | None | SRR13591340 | Sensitive | lineage4.8 | None | SRR13180336 | Sensitive | lineage4.8 | None | SRR16058624 | Sensitive | lineage3 | None | SRR16058196 | Sensitive | lineage4.1.2.1 | None | SRR16115866 | Sensitive | lineage4.1.1 | None | SRR16089635 | Other | lineage2.2.1 | None | SRR16100730 | Other | lineage2.2.1 | None | SRR16370576 | Sensitive | lineage3 | None | SRR18914246 | Sensitive | lineage4.8 | None | SRR16370668 | Sensitive | lineage3 | None | SRR18912559 | Sensitive | lineage4.1.1 | None | SRR19267910 | Sensitive | lineage3 | None | SRR21576631 | MDR-TB | lineage2.1 | None | SRR19355499 | RR-TB | lineage2 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR19317584 | Sensitive | lineage3 | None | SRR21239854 | Sensitive | lineage4.3.3 | None | SRR21576552 | RR-TB | lineage4.4.2 | None | SRR21659823 | Sensitive | lineage1.1.3.1 | None | SRR21658542 | Sensitive | lineage4.1.2.1 | None | SRR21685361 | Sensitive | lineage4.1.1.2 | None | SRR21662811 | Sensitive | lineage1.1.3.1 | None | SRR21675699 | RR-TB | lineage3 | None | SRR21710583 | Sensitive | lineage4.3.4.2 | None | SRR21713566 | Sensitive | lineage4.3.3 | None | SRR21711123 | Sensitive | lineage4.4.1.2 | None | SRR21713554 | Sensitive | lineage4.1.1 | None | SRR21728324 | Sensitive | lineage4.8 | None | SRR24827311 | RR-TB | lineage3 | None | SRR21736388 | Sensitive | lineage4.3.3 | None | SRR21747033 | MDR-TB | lineage4.4.2 | None | SRR24827290 | Sensitive | lineage4.3.3 | None | ERR911950 | Other | lineage4.8 | None | ERR3256210 | MDR-TB | lineage1.2.1.2.1 | ph | SRR6896244 | Sensitive | lineage4.3.2.1 | None | ERR4830884 | MDR-TB | lineage4.2.1 | None | SRR6930891 | RR-TB | lineage2.2.2 | None | SRR6896252 | Sensitive | lineage4.3.2.1 | None | SRR6896396 | MDR-TB | lineage4.3.2.1 | None | ERR3639780 | Pre-XDR-TB | lineage4.3.3 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | ERR4162019 | HR-TB | lineage5.1.1 | None | ERR4162003 | Sensitive | lineage5.1.1 | None | ERR4162004 | Sensitive | lineage5.1.1 | None | ERR4195845 | Sensitive | lineage4.2.1 | None | ERR4162025 | HR-TB | lineage5.1.1 | None | ERR4195326 | Sensitive | lineage4.8 | None | ERR4195527 | Sensitive | lineage4.1.1 | None | ERR4195710 | Sensitive | lineage4.1 | None | ERR4195831 | Sensitive | lineage4.2.1 | None | ERR4195730 | Sensitive | lineage4.8 | None | ERR4195832 | Sensitive | lineage4.3.3 | None | ERR9121467 | Sensitive | lineage4.2.1 | None | ERR9121432 | Sensitive | lineage4.2.1 | None | ERR9121433 | Sensitive | lineage4.3.3 | None | ERR4407516 | Sensitive | lineage4.3.1 | None | ERR9121263 | Sensitive | lineage4.8 | None | ERR9125520 | Sensitive | lineage3 | None | ERR9121692 | Sensitive | lineage4.8 | None | ERR9125694 | Sensitive | lineage4.1.2.1 | None | ERR9125806 | Sensitive | lineage4.6 | None | ERR9786445 | Sensitive | lineage4.8 | None | ERR9896107 | Sensitive | lineage5.1.1 | None |
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