Rv2043c - c.456dupC
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
162 MDR-TB
412 Pre-XDR-TB
27 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 587 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.3.3 | 3 |
| lineage2.2.2 | 5 |
| lineage3.1.1;lineage4.3.3 | 4 |
| lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.3.2.1;lineage4.3.3 | 1 |
| lineage2;lineage4.3.3 | 1 |
| lineage2.2.2;lineage4.3.3 | 1 |
| lineage4.3.2;lineage4.3.3 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 606 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02350411 | Pre-XDR-TB | lineage4.3.3 | za | SRR1169193 | MDR-TB | lineage4.3.3 | None | SRR1173101 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925618 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773750 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165644 | MDR-TB | lineage4.3.3 | None | SRR1011462 | Pre-XDR-TB | lineage4.3.3 | None | SRR847778 | Pre-XDR-TB | lineage4.3.3 | za | SRR847800 | Pre-XDR-TB | lineage4.3.3 | za | SRR29093411 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971096 | MDR-TB | lineage4.3.3 | None | SRR9971176 | MDR-TB | lineage4.3.3 | None | SRR833110 | MDR-TB | lineage4.3.3 | None | ERR1633780 | MDR-TB | lineage4.3.3 | za | SRR1172323 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165323 | MDR-TB | lineage4.3.3 | None | SRR1173094 | MDR-TB | lineage4.3.3 | None | SRR1173370 | MDR-TB | lineage4.3.3 | None | ERR13267430 | Pre-XDR-TB | lineage4.3.3 | None | SRR1174833 | MDR-TB | lineage4.3.3 | None | ERR9806996 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167335 | MDR-TB | lineage4.3.3 | None | SRR1165633 | MDR-TB | lineage4.3.3 | None | SRR1011455 | Pre-XDR-TB | lineage4.3.3 | None | SRR924222 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167360 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488702 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093616 | Pre-XDR-TB | lineage4.3.3 | None | SRR29055619 | MDR-TB | lineage4.3.3 | None | ERR11488483 | Pre-XDR-TB | lineage4.3.3 | None | SRR29385400 | MDR-TB | lineage2.2.1;lineage4 | None | SRR29093286 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011452 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011453 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011457 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120140 | MDR-TB | lineage4.3.3 | None | SRR16156688 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184326 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971040 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093691 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971233 | MDR-TB | lineage4.3.3 | None | SRR1165662 | MDR-TB | lineage4.3.3 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | ERR3132265 | MDR-TB | lineage4.3.3 | None | SRR833024 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315583 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288921 | Pre-XDR-TB | lineage4.3.3 | None | SRR833191 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288982 | MDR-TB | lineage4.3.3 | None | ERR11773708 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773720 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971187 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165660 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183043 | Pre-XDR-TB | lineage4.3.3 | None | SRR924212 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011458 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062846 | Pre-XDR-TB | lineage4.3.3 | None | SRR847792 | Pre-XDR-TB | lineage4.3.3 | za | SRR1196536 | Pre-XDR-TB | lineage4.3.3 | None | SRR833125 | Pre-XDR-TB | lineage4.3.3 | None | SRR1144815 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167380 | MDR-TB | lineage4.3.3 | None | SRR10315686 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925668 | Pre-XDR-TB | lineage4.3.3 | None | SRR6896515 | MDR-TB | lineage4.3.3 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | ERR7361976 | MDR-TB | lineage4.3.3 | None | SRR1165640 | MDR-TB | lineage4.3.3 | None | SRR924230 | Pre-XDR-TB | lineage4.3.3 | None | ERR10610199 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181243 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925615 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925660 | Pre-XDR-TB | lineage4.3.3 | None | ERR279481 | MDR-TB | lineage4.3.3 | None | ERR11488842 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315699 | MDR-TB | lineage4.3.3 | None | ERR4831538 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1196503 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350413 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925619 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350415 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925639 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361975 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992972 | MDR-TB | lineage4.3.3 | None | ERR11773725 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165723 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808877 | Pre-XDR-TB | lineage4.3.3 | za | SRR1175325 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808921 | MDR-TB | lineage4.3.3 | None | ERR4808975 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180330 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808881 | MDR-TB | lineage4.3.3 | za | SRR924208 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773727 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773740 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809290 | Pre-XDR-TB | lineage4.3.3 | za | SRR924696 | MDR-TB | lineage4.3.3 | None | ERR4830507 | MDR-TB | lineage4.3.3 | za | ERR4830524 | Pre-XDR-TB | lineage4.3.3 | za | SRR1167273 | MDR-TB | lineage4.3.3 | None | SRR1169277 | MDR-TB | lineage4.3.3 | None | ERR4828975 | MDR-TB | lineage2.2.2 | None | ERR7911192 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911687 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830505 | MDR-TB | lineage4.3.3 | None | ERR8975698 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011471 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349167 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184324 | MDR-TB | lineage4.3.3 | None | SRR1184366 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184369 | MDR-TB | lineage4.3.3 | None | SRR1196685 | MDR-TB | lineage4.3.3 | None | SRR833086 | Pre-XDR-TB | lineage4.3.3 | za | SRR9970989 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975605 | MDR-TB | lineage4.3.3 | None | SRR1172793 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180293 | Pre-XDR-TB | lineage4.3.3 | None | SRR924206 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184301 | Pre-XDR-TB | lineage4.3.3 | None | SRR2101539 | MDR-TB | lineage4.3.3 | None | ERR1193747 | MDR-TB | lineage4.3.3 | za | ERR2515776 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515344 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515411 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515175 | Pre-XDR-TB | lineage4.3.3 | za | SRR29093412 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971166 | XDR-TB | lineage4.3.3 | None | SRR29093951 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062826 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748232 | MDR-TB | lineage4.3.3 | None | SRR16156689 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992646 | MDR-TB | lineage4.3.3 | None | SRR833099 | MDR-TB | lineage4.3.3 | None | SRR1062824 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971095 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748474 | MDR-TB | lineage4.3.3 | None | SRR1062834 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831550 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806821 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925640 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180161 | MDR-TB | lineage4.3.3 | None | ERR11465081 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180433 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181170 | Pre-XDR-TB | lineage4.3.3 | None | SRR29055526 | MDR-TB | lineage4.3.3 | None | SRR29093243 | Pre-XDR-TB | lineage4.3.3 | None | SRR924213 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361977 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925659 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180441 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748074 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361962 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925650 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173349 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806901 | Pre-XDR-TB | lineage4.3.3 | None | ERR654964 | MDR-TB | lineage4.3.3 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR1167289 | MDR-TB | lineage4.3.3 | None | SRR1169212 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173555 | MDR-TB | lineage4.3.3 | None | SRR1173780 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167331 | MDR-TB | lineage4.3.3 | None | SRR1196523 | MDR-TB | lineage4.3.3 | None | SRR1169276 | MDR-TB | lineage4.3.3 | None | SRR16156686 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SAMN02586074 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR9971039 | XDR-TB | lineage4.3.3 | None | SRR1184342 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173560 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289280 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062839 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180369 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196530 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR3055714 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175065 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011456 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488588 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181396 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175066 | MDR-TB | lineage4.3.3 | None | ERR13288743 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992620 | MDR-TB | lineage4.3.3 | None | ERR7361978 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165315 | XDR-TB | lineage3.1.1;lineage4.3.3 | None | SAMN02053807 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350414 | Pre-XDR-TB | lineage4.3.3 | za | ERR8025486 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315653 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173391 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180959 | MDR-TB | lineage4.3.3 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806900 | Pre-XDR-TB | lineage4.3.3 | None | SRR924693 | Pre-XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR1173561 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180407 | MDR-TB | lineage4.3.3 | None | SRR1184333 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806959 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992621 | MDR-TB | lineage4.3.3 | None | SRR1165716 | MDR-TB | lineage4.3.3 | None | SRR9971227 | Pre-XDR-TB | lineage4.3.3 | None | SRR29096324 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971123 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971131 | MDR-TB | lineage4.3.3 | None | SRR9971240 | Pre-XDR-TB | lineage4.3.3 | None | SRR832991 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361995 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971303 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181174 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993127 | MDR-TB | lineage4.3.3 | None | ERR9992615 | XDR-TB | lineage4.3.3 | None | SRR1196496 | MDR-TB | lineage4.3.3 | None | ERR8025683 | Pre-XDR-TB | lineage4.3.3 | None | SRR924227 | Pre-XDR-TB | lineage4.3.3 | None | SRR833137 | MDR-TB | lineage4.3.3 | None | SRR1011470 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488367 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169147 | MDR-TB | lineage4.3.3 | None | SAMN01925666 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350427 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586076 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585981 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586073 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173276 | XDR-TB | lineage4.3.3 | None | SRR1173396 | MDR-TB | lineage4.3.3 | None | SRR1181138 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488368 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184297 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488703 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184368 | MDR-TB | lineage4.3.3 | None | SRR924234 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773739 | Pre-XDR-TB | lineage4.3.3 | None | SRR3055713 | Pre-XDR-TB | lineage4.3.3 | None | SRR1019172 | Pre-XDR-TB | lineage4.3.3 | None | SRR833078 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911566 | Pre-XDR-TB | lineage4.3.3 | za | SRR9971230 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830469 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062843 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911627 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | za | ERR11773752 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975821 | XDR-TB | lineage4.3.3 | None | ERR9992999 | XDR-TB | lineage4.3.3 | None | SAMN01925638 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925654 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925675 | MDR-TB | lineage4.3.3 | None | SRR1167183 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR1180219 | MDR-TB | lineage4.3.3 | None | ERR11773709 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975819 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975982 | XDR-TB | lineage4.3.3 | None | ERR9992614 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992908 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1019166 | MDR-TB | lineage4.3.3 | None | SRR1062844 | Pre-XDR-TB | lineage4.3.3 | None | ERR1193881 | Pre-XDR-TB | lineage4.3.3 | za | SRR1167373 | MDR-TB | lineage4.3.3 | None | SRR1169155 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349166 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180379 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181026 | MDR-TB | lineage4.3.3 | None | SRR1184027 | MDR-TB | lineage4.3.3 | None | SRR1184367 | MDR-TB | lineage4.3.3 | None | SRR924225 | Pre-XDR-TB | lineage4.3.3 | None | SRR924232 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970994 | Pre-XDR-TB | lineage4.3.3 | None | SRR924235 | MDR-TB | lineage4.3.3 | None | SRR9971375 | Pre-XDR-TB | lineage4.3.3 | None | ERR10610221 | MDR-TB | lineage4.3.3 | None | SAMN01925661 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925634 | Pre-XDR-TB | lineage4.3.3 | za | SRR833105 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053760 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053766 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01828243 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053773 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053781 | MDR-TB | lineage4.3.3 | za | SAMN02053785 | MDR-TB | lineage4.3.3 | za | SAMN02053805 | MDR-TB | lineage4.3.3 | za | SRR833077 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350412 | Pre-XDR-TB | lineage4.3.3 | za | ERR7361989 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288938 | Pre-XDR-TB | lineage4.3.3 | None | ERR4829411 | MDR-TB | lineage2.2.2 | None | SRR10868972 | MDR-TB | lineage4.3.3 | None | ERR1873435 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011474 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173795 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184359 | MDR-TB | lineage4.3.3 | None | SRR1062835 | Pre-XDR-TB | lineage4.3.3 | None | SRR924219 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140932 | MDR-TB | lineage4.3.3 | None | SRR6981952 | MDR-TB | lineage4.3.3 | None | ERR7737750 | MDR-TB | lineage4.3.3 | None | ERR11773744 | MDR-TB | lineage4.3.3 | None | SRR1173482 | MDR-TB | lineage4.3.3 | None | SRR1196542 | XDR-TB | lineage4.3.3 | None | SRR924220 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120141 | MDR-TB | lineage4.3.3 | None | SRR847787 | Pre-XDR-TB | lineage4.3.3 | za | SRR924231 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169175 | MDR-TB | lineage4.3.3 | None | SRR16156864 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971051 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062840 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173448 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992647 | XDR-TB | lineage4.3.3 | None | SRR1173194 | MDR-TB | lineage4.3.3 | None | SRR1175022 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993116 | MDR-TB | lineage4.3.3 | None | SRR1011454 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011467 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173324 | HR-TB | lineage4.3.3 | None | SRR1173180 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737634 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181089 | MDR-TB | lineage4.3.3 | None | ERR13288915 | MDR-TB | lineage4.3.3 | None | SRR29055678 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181391 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971335 | Pre-XDR-TB | lineage4.3.3 | None | ERR1034984 | Pre-XDR-TB | lineage4.3.3 | za | SRR1196539 | MDR-TB | lineage4.3.3 | None | SRR29093970 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925641 | Pre-XDR-TB | lineage4.3.3 | None | SRR29126783 | MDR-TB | lineage2.2.2 | None | SRR1181357 | Pre-XDR-TB | lineage4.3.3 | None | SRR924697 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992612 | XDR-TB | lineage4.3.3 | None | SRR924214 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173023 | MDR-TB | lineage4.3.3 | None | SRR29385402 | MDR-TB | lineage2.2.2 | None | SRR16156840 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093230 | Pre-XDR-TB | lineage4.3.3 | None | SRR29056095 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062825 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173142 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183969 | MDR-TB | lineage4.3.3 | None | SRR1184331 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180301 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349177 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970990 | Pre-XDR-TB | lineage4.3.3 | None | ERR6362445 | MDR-TB | lineage4.3.3 | None | ERR9993040 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196484 | MDR-TB | lineage4.3.3 | None | SRR1196576 | Pre-XDR-TB | lineage4.3.3 | None | SRR847777 | Pre-XDR-TB | lineage4.3.3 | za | ERR10748187 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180302 | MDR-TB | lineage4.3.3 | None | ERR9992884 | MDR-TB | lineage4.3.3 | None | SRR6855822 | Pre-XDR-TB | lineage4.3.2.1;lineage4.3.3 | None | SRR1011468 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361964 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831575 | Pre-XDR-TB | lineage4.3.3 | None | SRR833006 | MDR-TB | lineage4.3.3 | None | ERR7361984 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093176 | Pre-XDR-TB | lineage4.3.3 | None | SRR833013 | Pre-XDR-TB | lineage4.3.3 | None | SRR833058 | Pre-XDR-TB | lineage4.3.3 | za | SRR924211 | MDR-TB | lineage4.3.3 | None | SRR924226 | Pre-XDR-TB | lineage4.3.3 | None | SRR29056339 | MDR-TB | lineage4.3.3 | None | SRR1196575 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | ERR9806902 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350425 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350430 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350426 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350431 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350422 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350417 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403550 | MDR-TB | lineage4.3.3 | za | SAMN02403549 | MDR-TB | lineage4.3.3 | za | SAMN02403621 | Pre-XDR-TB | lineage4.3.3 | za | SRR924228 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403568 | Pre-XDR-TB | lineage4.3.3 | za | ERR473327 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173354 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403572 | MDR-TB | lineage4.3.3 | za | SAMN02403567 | MDR-TB | lineage4.3.3 | za | SAMN02403569 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403573 | MDR-TB | lineage4.3.3 | za | SRR1183125 | MDR-TB | lineage4.3.3 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | SRR8758885 | Pre-XDR-TB | lineage4.3.3 | None | SRR833029 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173200 | Pre-XDR-TB | lineage4.3.3 | None | SRR924216 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361959 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737921 | MDR-TB | lineage4.3.3 | None | ERR8025485 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173410 | HR-TB | lineage4.3.3 | None | ERR11773705 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808878 | MDR-TB | lineage4.3.3 | za | SRR833033 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830515 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830554 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830557 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830506 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918042 | XDR-TB | lineage4.3.3 | za | ERR8975018 | XDR-TB | lineage4.3.3 | None | SAMN01925670 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062842 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180388 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183008 | MDR-TB | lineage4.3.3 | None | SRR924692 | Pre-XDR-TB | lineage4.3.3 | None | ERR2516797 | MDR-TB | lineage4.3.3 | gb | SRR1184300 | XDR-TB | lineage4.3.3 | None | ERR9992791 | XDR-TB | lineage4.3.3 | None | ERR9993011 | XDR-TB | lineage4.3.3 | None | ERR9993074 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173199 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806993 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02585977 | MDR-TB | lineage4.3.3 | za | SAMN02585976 | MDR-TB | lineage4.3.3 | za | SAMN02586059 | MDR-TB | lineage4.3.3 | za | SAMN02586104 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586065 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586061 | MDR-TB | lineage4.3.3 | za | SAMN02586060 | MDR-TB | lineage4.3.3 | za | SAMN02586066 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586069 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586070 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586068 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586087 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586080 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586079 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586081 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586084 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586090 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586093 | MDR-TB | lineage4.3.3 | za | SAMN02586094 | MDR-TB | lineage4.3.3 | za | SAMN02586085 | MDR-TB | lineage4.3.3 | za | SAMN02586101 | MDR-TB | lineage4.3.3 | za | SAMN02586017 | XDR-TB | lineage4.3.3 | za | SAMN02586018 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586041 | Pre-XDR-TB | lineage4.3.3 | za | SRR9971332 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165674 | Pre-XDR-TB | lineage2;lineage4.3.3 | None | SRR1169271 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172870 | MDR-TB | lineage4.3.3 | None | SAMN02053801 | MDR-TB | lineage4.3.3 | za | SAMN02403504 | MDR-TB | lineage4.3.3 | za | SAMN02403505 | MDR-TB | lineage4.3.3 | za | SRR924207 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173789 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR832996 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488533 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970997 | Pre-XDR-TB | lineage4.3.3 | None | SRR847794 | Pre-XDR-TB | lineage4.3.3 | za | SRR9971057 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184382 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011466 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062827 | Pre-XDR-TB | lineage4.3.3 | None | SRR832995 | MDR-TB | lineage4.3.3 | None | SRR10315684 | Pre-XDR-TB | lineage4.3.3 | None | SRR924205 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286170 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180233 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286201 | Pre-XDR-TB | lineage2.2.2;lineage4.3.3 | None | SRR1165225 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361988 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286202 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286043 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289393 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975515 | Pre-XDR-TB | lineage4.3.3 | None | ERR7362014 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809318 | MDR-TB | lineage4.3.3 | za | SRR1062822 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808988 | Pre-XDR-TB | lineage4.3.3 | za | SRR833115 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918119 | Pre-XDR-TB | lineage4.3.3 | za | SRR1165261 | MDR-TB | lineage4.3.3 | None | SRR833059 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925614 | Pre-XDR-TB | lineage4.3.3 | None | SRR833173 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062823 | Pre-XDR-TB | lineage4.3.3 | None | SRR847793 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925636 | Pre-XDR-TB | lineage4.3.3 | None | SRR924215 | Pre-XDR-TB | lineage4.3.3 | None | SRR1019171 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315625 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925667 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748177 | Pre-XDR-TB | lineage4.3.3 | None | ERR552049 | MDR-TB | lineage4.3.3 | None | SRR1173218 | Other | lineage4.3.3 | None | SRR1196515 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184022 | MDR-TB | lineage4.3.3 | None | SRR1165629 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184320 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993123 | XDR-TB | lineage4.3.3 | None | SRR16156851 | Pre-XDR-TB | lineage4.3.3 | None | SRR833114 | MDR-TB | lineage4.3.3 | None | SRR833121 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748477 | MDR-TB | lineage4.3.3 | None | SAMN01925633 | MDR-TB | lineage4.3.3 | None | SRR16156760 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173449 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167185 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315627 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167341 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169248 | MDR-TB | lineage4.3.3 | None | SRR1172119 | MDR-TB | lineage4.3.3 | None | SRR1172275 | MDR-TB | lineage4.3.3 | None | ERR7737731 | MDR-TB | lineage4.3.3 | None | ERR654967 | MDR-TB | lineage4.3.3 | None | SRR10315698 | MDR-TB | lineage4.3.3 | None | SRR924694 | Pre-XDR-TB | lineage4.3.3 | None | SRR10868994 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289323 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488704 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488942 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315655 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286130 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173731 | MDR-TB | lineage4.3.3 | None | ERR13288988 | MDR-TB | lineage4.3.3 | None | ERR9992629 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196477 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515622 | Pre-XDR-TB | lineage4.3.2;lineage4.3.3 | za | ERR2515400 | MDR-TB | lineage4.3.3 | za | SRR1165698 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167359 | MDR-TB | lineage4.3.3 | None | ERR2515682 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515754 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515319 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181376 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196516 | MDR-TB | lineage4.3.3 | None | SRR1167350 | Pre-XDR-TB | lineage4.3.3 | None | SRR847788 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975004 | Pre-XDR-TB | lineage4.3.3 | None | SRR924223 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975080 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173518 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR833023 | Pre-XDR-TB | lineage4.3.3 | None | SRR833040 | MDR-TB | lineage4.3.3 | za | SRR833124 | MDR-TB | lineage4.3.3 | None | SAMN01925617 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173784 | MDR-TB | lineage4.3.3 | None | SRR833064 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062828 | Pre-XDR-TB | lineage4.3.3 | None | SRR958195 | MDR-TB | lineage4.3.3 | None | ERR495012 | MDR-TB | lineage4.3.3 | None | ERR7737708 | MDR-TB | lineage4.3.3 | None | SRR1184378 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350421 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350416 | Pre-XDR-TB | lineage4.3.3 | za | SRR847796 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350429 | Pre-XDR-TB | lineage4.3.3 | za | SRR847776 | Pre-XDR-TB | lineage4.3.3 | za | SRR847789 | Pre-XDR-TB | lineage4.3.3 | za | SRR847783 | Pre-XDR-TB | lineage4.3.3 | za | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925663 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350433 | Pre-XDR-TB | lineage4.3.3 | za | SRR847785 | Pre-XDR-TB | lineage4.3.3 | za | SRR847791 | Pre-XDR-TB | lineage4.3.3 | za | SRR847781 | MDR-TB | lineage4.3.3 | za | SAMN02350475 | MDR-TB | lineage4.3.3 | za | SAMN02585959 | Pre-XDR-TB | lineage4.3.3 | za | SRR28393312 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773747 | MDR-TB | lineage4.3.3 | None | SRR1172254 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172869 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181290 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184315 | MDR-TB | lineage4.3.3 | None | SRR9971228 | Pre-XDR-TB | lineage4.3.3 | None | ERR551452 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971315 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403467 | Pre-XDR-TB | lineage4.3.3 | za | SRR1011472 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925658 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196511 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196510 | Pre-XDR-TB | lineage4.3.3 | None | SRR833130 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992673 | MDR-TB | lineage4.3.3 | None | SRR10315624 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169191 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02053744 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925653 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315605 | Pre-XDR-TB | lineage4.3.3 | None | ERR6362755 | MDR-TB | lineage4.3.3 | None | ERR13289260 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286214 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175064 | HR-TB | lineage4.3.3 | None | ERR9992957 | XDR-TB | lineage4.3.3 | None | ERR13286042 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992871 | XDR-TB | lineage4.3.3 | None | ERR9993117 | XDR-TB | lineage4.3.3 | None | ERR13288794 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181220 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992695 | XDR-TB | lineage4.3.3 | None | SRR10315604 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992915 | XDR-TB | lineage4.3.3 | None | ERR9993253 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925651 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488574 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011463 | Pre-XDR-TB | lineage4.3.3 | None | ERR4829636 | MDR-TB | lineage2.2.2 | it | ERR8025610 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172727 | MDR-TB | lineage4.3.3 | None | SRR1173039 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970987 | Pre-XDR-TB | lineage4.3.3 | None |
|---|
