lineage | Count |
---|---|
40 | |
lineage2.2.1 | 3 |
lineage4.3 | 1 |
lineage4.9 | 3 |
lineage4.7 | 1 |
lineage4 | 2 |
La1 | 1 |
lineage6 | 1 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675234 | Other | None | SRR18003040 | MDR-TB | lineage2.2.1 | None | ERR158583 | HR-TB | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | SRR3675502 | Other | None | ERR212121 | HR-TB | None | SRR3675550 | Other | None | SRR3675574 | HR-TB | None | ERR1035162 | Other | None | ERR2693231 | Other | None | SRR5341418 | Other | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6046482 | HR-TB | None | ERR502889 | Other | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR133986 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR027293 | Other | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR3797044 | Other | None | ERR3283024 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3439432 | Other | None | ERR3797061 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358991 | HR-TB | None | ERR8158064 | Sensitive | lineage2.2.1 | None | ERR9786604 | Other | None | ERR9787165 | Other | lineage6 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None |
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