TB-Profiler
Home
Upload
SRA data
Rv2752c
- c.-291_-289delGCCinsTT
Drug resistance types
0 Sensitive
2 RR-TB
5 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
3
lineage2.2.1.1
2
lineage3.1.2.2
1
La1.6;La3;M.canetti;lineage2.1;lineage4.9
1
La3;lineage4.9
1
La2;lineage4.9;lineage9
1
La3;lineage2.1;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
Showing 1 to 9 of 9 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
12
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
ERR3283020
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.9
None
ERR3797017
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3797044
Other
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
SRR1169306
Other
La3;lineage4.9
None
SRR1183106
RR-TB
lineage2.2.1.1
None
Showing 1 to 10 of 12 entries
Previous
1
2
Next