lineage | Count |
---|---|
lineage4.5 | 1 |
lineage1.2.2.2 | 1 |
25 | |
lineage4.9;La3 | 1 |
lineage4.1.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.8;La3 | 1 |
lineage2.2.1 | 3 |
lineage1.1.3 | 1 |
lineage2.2 | 1 |
lineage4.3.3 | 1 |
lineage4.7 | 1 |
lineage4.8 | 1 |
lineage4.9 | 1 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR14519652 | Sensitive | lineage1.2.2.2 | None | SRR19303884 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827682 | Other | None | ERR176793 | Other | lineage4.1.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR6045930 | Sensitive | lineage1.1.3 | gb | SRR3675236 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6480529 | Sensitive | lineage4.3.3 | None | ERR4819932 | Other | lineage4.7 | None | SRR6045233 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6046540 | HR-TB | None | ERR11044555 | Sensitive | lineage4.8 | None | ERR502532 | HR-TB | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR6358991 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR1172234 | Other | None | SRR12416824 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | SRR1169194 | Other | None |
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