lineage | Count |
---|---|
88 | |
lineage7 | 71 |
lineage4.1 | 1 |
lineage4 | 9 |
lineage4.1.1.3 | 1 |
lineage2.2.1 | 3 |
lineage4.1.2.1 | 3 |
lineage3.1 | 2 |
lineage4.9 | 3 |
La1 | 1 |
lineage4.3.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8 | 2 |
spoligotype | Count |
---|---|
None | 186 |
ID | Drug resistance | Lineage | Country iso2 | SRR19303884 | HR-TB | None | SRR18911237 | Sensitive | lineage7 | None | SRR3675486 | HR-TB | None | SRR19304036 | HR-TB | None | ERR11068109 | Sensitive | lineage7 | None | SRR3675465 | HR-TB | None | ERR11068585 | Sensitive | lineage7 | None | SRR27332343 | Sensitive | lineage7 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161033 | HR-TB | None | ERR233354 | Sensitive | lineage7 | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675574 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | SAMEA4791119 | Sensitive | lineage7 | au | ERR233349 | Other | lineage7 | None | ERR234659 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR233355 | Sensitive | lineage7 | None | ERR234681 | Sensitive | lineage7 | None | ERR181435 | Sensitive | lineage7 | dj | SRR5341461 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | ERR400415 | Sensitive | lineage7 | gb | SRR5341300 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | ERR4819975 | Sensitive | lineage7 | None | SRR5341333 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2693254 | Other | None | SRR5341467 | Other | lineage4 | None | ERR1971877 | Sensitive | lineage7 | et | ERR1971864 | Sensitive | lineage7 | et | ERR1971873 | Sensitive | lineage7 | et | ERR1971874 | Sensitive | lineage7 | et | ERR1971856 | Sensitive | lineage7 | et | ERR1971871 | Sensitive | lineage7 | et | ERR1971849 | Sensitive | lineage7 | et | ERR1971861 | Sensitive | lineage7 | et | ERR1971853 | Sensitive | lineage7 | et | ERR1971865 | Sensitive | lineage7 | et | ERR1971857 | Sensitive | lineage7 | et | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR1971867 | Sensitive | lineage7 | et | ERR1971859 | Sensitive | lineage7 | et | ERR1971870 | Sensitive | lineage7 | et | ERR1971876 | Sensitive | lineage7 | et | ERR1971852 | Sensitive | lineage7 | et | ERR1971854 | Sensitive | lineage7 | et | ERR1971860 | Sensitive | lineage7 | et | ERR1971872 | Sensitive | lineage7 | et | ERR1971869 | Sensitive | lineage7 | et | ERR1971863 | Sensitive | lineage7 | et | ERR1971862 | Sensitive | lineage7 | et | ERR1971850 | Sensitive | lineage7 | et | ERR1971868 | Sensitive | lineage7 | et | ERR1971855 | Sensitive | lineage7 | et | ERR1971866 | Sensitive | lineage7 | et | ERR1971858 | Sensitive | lineage7 | et | SRR6046514 | HR-TB | None | ERR2704710 | Sensitive | lineage7 | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2704711 | Sensitive | lineage7 | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | ERR1200604 | Sensitive | lineage7 | et | ERR1200631 | Sensitive | lineage7 | et | ERR1200619 | Sensitive | lineage7 | et | ERR4830919 | Pre-XDR-TB | lineage2.2.1 | np | ERR1200617 | Other | lineage7 | et | ERR1200612 | Sensitive | lineage7 | et | ERR1200636 | Other | lineage7 | et | ERR1200625 | Sensitive | lineage7 | et | ERR1200624 | Sensitive | lineage7 | et | ERR1200610 | Sensitive | lineage7 | et | ERR1200640 | Sensitive | lineage7 | et | ERR1200633 | Sensitive | lineage7 | et | SRR6511621 | HR-TB | None | ERR1200613 | Sensitive | lineage7 | et | ERR1200602 | Sensitive | lineage7 | et | ERR1200635 | Sensitive | lineage7 | et | ERR1200639 | Sensitive | lineage7 | et | ERR1200608 | Sensitive | lineage7 | et | ERR1200606 | Sensitive | lineage7 | et | ERR1200623 | Sensitive | lineage7 | et | ERR1200634 | Sensitive | lineage7 | et | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4814968 | Sensitive | lineage7 | gb | ERR4831117 | HR-TB | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | ERR11043150 | Sensitive | lineage7 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR11044943 | Sensitive | lineage7 | None | ERR11049146 | Sensitive | lineage7 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3323719 | Sensitive | lineage7 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR3797061 | Other | None | ERR4024991 | Other | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798262 | HR-TB | La1 | None | ERR4798099 | Other | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6866022 | Other | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR756348 | Sensitive | lineage7 | None | ERR736874 | HR-TB | None | ERR756344 | Sensitive | lineage7 | None | SRR1172817 | HR-TB | None | ERR756347 | Sensitive | lineage7 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7737753 | MDR-TB | lineage7 | None | ERR8976043 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | ERR756345 | Sensitive | lineage7 | None | ERR756346 | Sensitive | lineage7 | None | SRR1167384 | Other | lineage4 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1184380 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR14782566 | Sensitive | lineage4.8 | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782589 | Sensitive | lineage4.8 | None |
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