Rv2754c - c.-4C>T
Drug resistance types
2 Sensitive
0 RR-TB
17 HR-TB
59 MDR-TB
190 Pre-XDR-TB
12 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage4.1.1.3 | 9 |
| lineage2.1 | 1 |
| lineage2.2.1 | 197 |
| lineage2.2.2 | 8 |
| lineage4.4.2 | 3 |
| lineage4.3.3 | 5 |
| lineage3.1.2 | 1 |
| lineage5.2 | 20 |
| lineage4.3.4.2 | 5 |
| lineage4.2 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1.2 | 3 |
| lineage1.1.2 | 1 |
| 8 | |
| lineage1.2.2.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4 | 1 |
| La1.2 | 1 |
| lineage4.9 | 1 |
| lineage4.4.1.1;lineage3;lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage1.1.2 | 1 |
| lineage4.1.1.3;lineage2.2.1.2 | 1 |
| lineage3.1.2;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.1.2;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 284 |
Geographic prevalence
Country level data for this variant is available for 209 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2510547 | Pre-XDR-TB | lineage3 | None | ERR5918040 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911290 | MDR-TB | lineage2.1 | vn | SAMN02360618 | Pre-XDR-TB | lineage2.2.1 | kr | SRR2024926 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024905 | Pre-XDR-TB | lineage2.2.1 | cn | SRR4037518 | Sensitive | lineage2.2.1 | za | SRR8651579 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5266544 | Pre-XDR-TB | lineage2.2.1 | ru | SRR2024895 | MDR-TB | lineage2.2.1 | cn | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | ERR234653 | Pre-XDR-TB | lineage2.2.1 | ru | SRR2024884 | MDR-TB | lineage2.2.1 | cn | ERR7911114 | Pre-XDR-TB | lineage2.2.1 | vn | SAMN02585969 | Pre-XDR-TB | lineage4.3.3 | za | SRR2024906 | MDR-TB | lineage2.2.1 | cn | ERR4820276 | HR-TB | lineage3.1.2 | gb | SRR6824505 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024999 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5709919 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709889 | Pre-XDR-TB | lineage2.2.1 | th | ERR2706910 | MDR-TB | lineage5.2 | cd | ERR2514595 | Sensitive | lineage4.3.3 | gb | SRR2024936 | MDR-TB | lineage2.2.1 | cn | SAMN02398714 | Pre-XDR-TB | lineage2.2.1 | kr | ERR275199 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR2024977 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2707066 | MDR-TB | lineage5.2 | cd | ERR2706914 | MDR-TB | lineage5.2 | cd | ERR2706930 | MDR-TB | lineage5.2 | cd | ERR4822354 | MDR-TB | lineage4.2 | None | ERR2707097 | MDR-TB | lineage5.2 | cd | ERR2383627 | MDR-TB | lineage5.2 | fr | ERR2707015 | MDR-TB | lineage5.2 | cd | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | ERR5918119 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02360598 | Pre-XDR-TB | lineage2.2.1 | kr | ERR4829057 | HR-TB | lineage4.8 | it | SRR21277264 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349192 | Pre-XDR-TB | lineage4.3.3 | None | SRR22175208 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830662 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830661 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992754 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830913 | Pre-XDR-TB | lineage2.2.1 | np | ERR4828791 | HR-TB | lineage3 | None | SRR1020014 | Pre-XDR-TB | lineage2.2.2 | None | SRR16089634 | HR-TB | lineage2.2.1.2 | None | ERR3132287 | HR-TB | lineage2.2.1 | None | SRR22424726 | Pre-XDR-TB | lineage2.2.1 | None | SRR5817476 | Pre-XDR-TB | lineage1.1.2 | None | ERR4830953 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830952 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830961 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830954 | Pre-XDR-TB | lineage2.2.1 | np | ERR4872090 | MDR-TB | lineage5.2 | None | ERR4831001 | Pre-XDR-TB | lineage2.2.1 | np | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4830977 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831014 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831117 | HR-TB | None | ERR4831262 | XDR-TB | lineage2.2.1 | de | ERR4872089 | MDR-TB | lineage5.2 | None | ERR4872093 | MDR-TB | lineage5.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872233 | MDR-TB | lineage5.2 | None | ERR4872157 | MDR-TB | lineage5.2 | None | ERR4872167 | MDR-TB | lineage5.2 | None | ERR4872171 | MDR-TB | lineage5.2 | None | ERR4872123 | MDR-TB | lineage5.2 | None | ERR4872138 | MDR-TB | lineage5.2 | None | ERR9119495 | MDR-TB | lineage5.2 | None | ERR502894 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277050 | HR-TB | lineage2.2.1 | None | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | SRR22175203 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709932 | Pre-XDR-TB | lineage2.2.1 | th | ERR502929 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049032 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362017 | XDR-TB | lineage2.2.1 | None | ERR11049819 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR1049033 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | DRR130114 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156789 | MDR-TB | lineage1.2.2.2 | None | SRR2024881 | MDR-TB | lineage2.2.1 | cn | DRR130069 | Pre-XDR-TB | lineage2.2.1 | None | SRR14520113 | HR-TB | lineage1.1.1 | None | SRR14782405 | HR-TB | None | ERR1034603 | Pre-XDR-TB | lineage4.1.1.3 | pk | DRR130178 | Pre-XDR-TB | lineage2.2.1 | None | DRR130195 | MDR-TB | lineage4.2.2 | None | ERR1035096 | Pre-XDR-TB | lineage1.1.1.1 | vn | ERR4195394 | HR-TB | lineage2.2.1.2 | None | ERR1035207 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR10762353 | Pre-XDR-TB | lineage4.2.1 | None | ERR1213835 | HR-TB | lineage2.2.1 | kr | ERR3994123 | HR-TB | lineage2.2.1.2 | None | ERR4011122 | Pre-XDR-TB | lineage2.2.2 | None | ERR10762359 | Pre-XDR-TB | lineage4.2.1 | None | ERR11044053 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044701 | XDR-TB | lineage2.2.1 | None | ERR3256109 | Other | lineage1.2.1.2.1 | ph | ERR3445504 | HR-TB | None | ERR3639748 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553409 | MDR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4796335 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796746 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796375 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796434 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796635 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4796702 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796525 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796589 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796698 | MDR-TB | lineage2.2.1 | in | ERR4796722 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796793 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796761 | MDR-TB | lineage2.2.1 | in | ERR4796787 | MDR-TB | lineage4.4.1.1;lineage3;lineage1.2.2.2 | in | ERR4796794 | MDR-TB | lineage2.2.1 | in | ERR4796894 | XDR-TB | lineage2.2.1 | in | ERR4796798 | MDR-TB | lineage4.1.1.3 | in | ERR4796884 | MDR-TB | lineage2.2.1 | in | ERR4796938 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796984 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796956 | MDR-TB | lineage4.1.1.3 | in | ERR4796939 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796973 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796999 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797111 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797003 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797084 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797015 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797081 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797095 | MDR-TB | in | ERR4797213 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797549 | MDR-TB | lineage2.2.1 | in | ERR4797269 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797390 | MDR-TB | lineage2.2.1 | in | ERR4797432 | MDR-TB | lineage2.2.1 | in | ERR4797539 | MDR-TB | lineage2.2.1 | in | ERR4797334 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797384 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797503 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797501 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797697 | MDR-TB | lineage2.2.1 | in | ERR4797580 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797704 | MDR-TB | lineage2.2.1 | in | ERR4797579 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797622 | Pre-XDR-TB | lineage2.2.1;lineage1.1.2 | in | ERR4797710 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797896 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797712 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797831 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797858 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797994 | Pre-XDR-TB | lineage4.1.1.3;lineage2.2.1.2 | in | ERR4797973 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797971 | XDR-TB | lineage2.2.1 | in | ERR4797998 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4797997 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4798045 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798110 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798065 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798243 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798208 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798292 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798291 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798355 | MDR-TB | lineage2.2.1 | in | ERR4798349 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798457 | XDR-TB | lineage2.2.1 | in | ERR4798383 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798396 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798453 | MDR-TB | lineage2.2.1 | in | ERR4798479 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798604 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798509 | Pre-XDR-TB | lineage3.1.2;lineage2.2.1 | in | ERR4798564 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798497 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798504 | Other | lineage3 | None | ERR4798605 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798668 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798622 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798617 | XDR-TB | lineage2.2.1 | in | ERR4798728 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798762 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798804 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798760 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798759 | MDR-TB | lineage2.2.1 | in | ERR4798806 | MDR-TB | lineage2.2.1 | in | ERR4798857 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798811 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798875 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799082 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799001 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799093 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799139 | MDR-TB | lineage2.2.1 | in | ERR4799158 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799152 | MDR-TB | lineage2.2.1 | in | ERR4799148 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799219 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799212 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799216 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799187 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799218 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799222 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799229 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799290 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799239 | MDR-TB | lineage2.2.1 | in | ERR4799338 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799288 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799285 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799309 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799330 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799335 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799454 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR4799361 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799379 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799416 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799363 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799385 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799432 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799448 | XDR-TB | lineage2.2.1 | in | ERR4799654 | MDR-TB | lineage2.2.1 | in | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR4799526 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799647 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799471 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799570 | Pre-XDR-TB | lineage3;lineage2.2.1 | in | ERR4799637 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799789 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799681 | XDR-TB | lineage2.2.1 | in | ERR4799674 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799694 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799718 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4799875 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799830 | XDR-TB | lineage2.2.1 | in | ERR4799870 | MDR-TB | lineage2.2.1 | in | ERR4799902 | MDR-TB | lineage2.2.1;lineage1.2.2.2 | None | ERR4799887 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799900 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799958 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799945 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799909 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799988 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800276 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800212 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800267 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800287 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800293 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800332 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800321 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800431 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800619 | MDR-TB | lineage2.2.1 | None | ERR4800504 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800580 | MDR-TB | lineage2.2.1 | in | ERR4800599 | XDR-TB | lineage2.2.1 | in | ERR4800441 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800471 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800524 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800557 | Pre-XDR-TB | lineage4.1.2;lineage2.2.1 | in | ERR4810975 | MDR-TB | lineage2.2.1 | cn | ERR11049830 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR1664619 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5863718 | MDR-TB | lineage2.2.1 | None | SRR5709794 | Pre-XDR-TB | lineage2.2.1 | th | ERR1664644 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6824582 | MDR-TB | lineage2.2.2 | cn | ERR1664654 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6824461 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024928 | MDR-TB | lineage2.2.1 | cn | ERR2383626 | MDR-TB | lineage5.2 | fr | SAMN02360617 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4813141 | Pre-XDR-TB | lineage4.3.3 | None | SRR2024911 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8380939 | Pre-XDR-TB | lineage2.2.1 | in | ERR5918039 | Pre-XDR-TB | lineage4.1.1.3 | za |
|---|
