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SRA data
Rv3244c
- c.624G>C
Drug resistance types
1 Sensitive
3 RR-TB
18 HR-TB
17 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
9 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
12
M.canetti;lineage2.1;lineage4.9;lineage6.3
5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
2
La1.7;M.canetti;lineage4.9
2
M.canetti;lineage2.2
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage4.3.1;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.9
1
M.canetti;lineage2.1;lineage4.1.2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
50
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR3077978
RR-TB
lineage1.1
None
ERR3283016
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR3283017
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
None
ERR3283020
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.9
None
ERR3283026
HR-TB
lineage4.2;lineage4.6.3;lineage4.9.1
None
ERR3468544
Other
lineage2.1;lineage4.9
None
ERR3797014
Other
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3797016
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR3797017
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
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