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SRA data
Rv3262
- c.-279A>C
Drug resistance types
0 Sensitive
1 RR-TB
17 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
5
lineage2.1;lineage4.9;lineage6.3
5
lineage4.9;lineage6.3
5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
3
lineage2.1;lineage4.9
3
La3;lineage2.1;lineage4.9;lineage6.3
2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
La3;lineage2
1
lineage2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
38
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR212121
HR-TB
lineage4.9;lineage6.3
None
ERR2514327
HR-TB
lineage4.8
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3283019
Other
lineage2.1;lineage4.9
None
ERR3283020
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.9
None
ERR3283024
Other
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
None
ERR3283032
Other
lineage4.9
None
Showing 1 to 10 of 38 entries
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