lineage | Count |
---|---|
42 | |
lineage4.9 | 2 |
lineage2 | 2 |
lineage6.3;lineage2.2.1 | 1 |
lineage5.2 | 2 |
lineage2.2 | 1 |
lineage3 | 1 |
lineage4 | 3 |
lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | SRR19303884 | HR-TB | None | SRR26159043 | Other | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675222 | Other | None | SRR3675488 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675311 | Other | None | ERR2514692 | Other | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6045526 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046540 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769521 | HR-TB | None | ERR3283027 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR6359045 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR702404 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | ERR736835 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | ERR736865 | HR-TB | None | SRR1172951 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1184380 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None |
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