lineage | Count |
---|---|
lineage6.2.3 | 97 |
lineage6.2.2 | 63 |
lineage4.7 | 89 |
lineage6.2.1 | 27 |
lineage6.2 | 8 |
lineage4.9 | 1 |
lineage6.2.2;lineage4 | 1 |
lineage4.8.1 | 1 |
lineage6.2.2;lineage4.3.3 | 1 |
lineage6.2.3;lineage4.1.2.1 | 1 |
lineage6.2.1;lineage4.1.3 | 1 |
4 | |
La1.8.1 | 1 |
lineage6.2;lineage6.1 | 2 |
lineage2.2.1 | 1 |
lineage6.2;lineage6.1.3 | 1 |
lineage6.2;lineage6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 300 |
ID | Drug resistance | Lineage | Country iso2 | SRR21658761 | Sensitive | lineage6.2.3 | None | SRR21658384 | Sensitive | lineage6.2.3 | None | SRR21709327 | Sensitive | lineage6.2.2 | None | SRR21710575 | Sensitive | lineage6.2.3 | None | SRR21709338 | Sensitive | lineage6.2.2 | None | SRR21722117 | Sensitive | lineage6.2.3 | None | SRR21726718 | Sensitive | lineage4.7 | None | ERR11067689 | Sensitive | lineage6.2.3 | None | SRR21727754 | Sensitive | lineage6.2.3 | None | ERR11068125 | Sensitive | lineage6.2.2 | None | ERR11067793 | Sensitive | lineage4.7 | None | ERR11068084 | Sensitive | lineage6.2.3 | None | ERR11068802 | Sensitive | lineage4.7 | None | ERR11068380 | Sensitive | lineage6.2.2 | None | ERR11081178 | Sensitive | lineage6.2.1 | None | ERR11081147 | Sensitive | lineage4.7 | None | ERR11082261 | Sensitive | lineage4.7 | None | ERR11081213 | Sensitive | lineage6.2.3 | None | ERR11081708 | Sensitive | lineage6.2.3 | None | ERR11082379 | Sensitive | lineage4.7 | None | ERR11082382 | Sensitive | lineage4.7 | None | ERR551439 | Sensitive | lineage6.2.3 | None | ERR11082792 | Sensitive | lineage6.2.3 | None | ERR7363141 | Sensitive | lineage4.7 | None | ERR9806705 | RR-TB | lineage4.7 | None | ERR11082396 | Sensitive | lineage6.2 | None | ERR11082546 | Sensitive | lineage6.2.2 | None | ERR11082925 | Sensitive | lineage4.7 | None | ERR11082975 | Sensitive | lineage6.2.3 | None | ERR10610083 | RR-TB | lineage4.7 | None | ERR551438 | Sensitive | lineage6.2.3 | None | ERR551440 | Sensitive | lineage4.9 | None | ERR552247 | Sensitive | lineage6.2.2 | None | ERR552246 | Sensitive | lineage6.2.2 | None | ERR1465949 | Sensitive | lineage4.7 | ch | SAMN02231130 | Sensitive | lineage6.2.1 | ml | ERR1465957 | Sensitive | lineage4.7 | None | SAMN02414910 | MDR-TB | lineage4.7 | se | ERR551118 | Other | lineage6.2.2 | None | ERR171153 | Sensitive | lineage4.7 | za | ERR4815376 | Sensitive | lineage4.7 | gb | ERR171152 | Sensitive | lineage4.7 | za | ERR4814597 | Other | lineage4.7 | None | ERR4816945 | Sensitive | lineage4.7 | gb | ERR4814844 | Sensitive | lineage4.7 | gb | ERR550712 | Sensitive | lineage6.2.2 | None | ERR551419 | Sensitive | lineage6.2.3 | None | ERR11049207 | Sensitive | lineage6.2.3 | None | ERR4816033 | Sensitive | lineage4.7 | None | ERR2027253 | Other | lineage6.2.3 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4817333 | Other | lineage4.7 | gb | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | ERR2181458 | Sensitive | lineage6.2.3 | gh | ERR550983 | Sensitive | lineage6.2.2 | de | ERR4817169 | Other | lineage4.7 | gb | ERR550942 | Sensitive | lineage6.2.3 | None | ERR4817189 | Other | lineage4.7 | None | SRR4033284 | Sensitive | lineage4.8.1 | None | ERR4816827 | HR-TB | lineage4.7 | gb | ERR551915 | Sensitive | lineage6.2.2 | None | SAMN02414909 | MDR-TB | lineage4.7 | se | ERR4816872 | Other | lineage4.7 | None | ERR553056 | Other | lineage4.7 | de | ERR4817795 | Other | lineage4.7 | gb | SAMEA2534512 | Sensitive | lineage6.2.2 | None | ERR2513380 | Sensitive | lineage4.7 | gb | ERR2513076 | Sensitive | lineage4.7 | gb | ERR4818754 | Sensitive | lineage6.2.2 | None | ERR4818121 | Other | lineage4.7 | gb | ERR4819142 | Other | lineage4.7 | gb | ERR234667 | Sensitive | lineage6.2.2;lineage4.3.3 | ru | ERR234678 | Sensitive | lineage6.2.2 | None | ERR2513324 | Sensitive | lineage4.7 | gb | ERR234677 | Sensitive | lineage6.2.1 | None | ERR2512535 | Sensitive | lineage4.7 | gb | ERR552294 | Sensitive | lineage6.2.3 | de | ERR3275199 | Sensitive | lineage6.2.3 | nl | ERR2514403 | Sensitive | lineage6.2.2 | gb | ERR4819211 | Other | lineage4.7 | None | ERR4819644 | Sensitive | lineage4.7 | gb | ERR4819932 | Other | lineage4.7 | None | ERR2514715 | Sensitive | lineage4.7 | gb | ERR11049329 | Sensitive | lineage4.7 | None | ERR4820596 | Sensitive | lineage4.7 | None | ERR2514918 | Sensitive | lineage6.2.2 | gb | ERR553286 | Sensitive | lineage6.2.2 | None | ERR2515044 | Sensitive | lineage4.7 | gb | ERR2517500 | Sensitive | lineage6.2.3 | nl | ERR552204 | Other | lineage4.7 | de | ERR552267 | Sensitive | lineage6.2.2 | None | ERR4829892 | Sensitive | lineage4.7 | it | ERR2704688 | Sensitive | lineage6.2.1 | gh | ERR4821969 | Sensitive | lineage6.2.3 | None | ERR2679289 | HR-TB | lineage6.2.3;lineage4.1.2.1 | None | ERR4822173 | Other | lineage4.7 | None | ERR4821549 | Sensitive | lineage4.7 | gb | ERR4821604 | Sensitive | lineage4.7 | gb | ERR4829359 | Other | lineage4.7 | None | ERR2446369 | Sensitive | lineage6.2.3 | nl | ERR4829212 | Sensitive | lineage6.2.3 | None | ERR4828793 | Sensitive | lineage4.7 | None | ERR4829405 | HR-TB | lineage4.7 | it | ERR4829484 | Sensitive | lineage4.7 | it | ERR4829528 | Sensitive | lineage4.7 | it | ERR4828801 | HR-TB | lineage4.7 | None | ERR4828792 | Sensitive | lineage4.7 | None | SRR6187070 | Sensitive | lineage4.7 | None | SRR6046646 | Other | lineage4.7 | gb | SAMEA2533942 | Sensitive | lineage6.2.3 | None | ERR4828921 | Sensitive | lineage6.2.3 | None | ERR4828932 | Sensitive | lineage4.7 | None | SRR6187069 | Sensitive | lineage4.7 | None | SRR6187071 | HR-TB | lineage4.7 | None | ERR4831263 | Sensitive | lineage6.2.2 | de | ERR3170427 | Sensitive | lineage6.2.1 | gh | SRR6187068 | Sensitive | lineage4.7 | None | ERR3170426 | Sensitive | lineage6.2.3 | gh | ERR3170430 | Sensitive | lineage6.2.1 | gh | ERR3170429 | Sensitive | lineage6.2.1 | gh | SRR6981975 | Sensitive | lineage4.7 | None | ERR3170431 | Sensitive | lineage6.2.1 | gh | ERR3170453 | HR-TB | lineage6.2.1 | gh | ERR502504 | HR-TB | lineage6.2.1;lineage4.1.3 | None | ERR502503 | Sensitive | lineage6.2.1 | gh | ERR502506 | MDR-TB | lineage6.2.1 | gh | ERR502527 | Sensitive | lineage6.2.2 | gh | ERR2200124 | Sensitive | lineage4.7 | de | ERR502514 | Other | lineage6.2.1 | gh | SRR7131078 | Sensitive | lineage6.2.3 | None | ERR3276131 | Sensitive | lineage4.7 | nl | SRR7131015 | Sensitive | lineage6.2.3 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | ERR502532 | HR-TB | None | SRR8073661 | Other | La1.8.1 | None | ERR553000 | MDR-TB | lineage6.2.2 | None | SRR998605 | Sensitive | lineage6.2.1 | None | ERR11067465 | Other | lineage4.7 | None | SRR998604 | Sensitive | lineage6.2.1 | None | ERR841441 | Sensitive | lineage6.2.1 | gh | SRR7517687 | Sensitive | lineage6.2.3 | ci | SRR998607 | Sensitive | lineage6.2.1 | None | SRR998606 | Sensitive | lineage6.2.1 | None | SRR998629 | Sensitive | lineage6.2.3 | None | SRR998631 | Sensitive | lineage6.2.3 | None | SRR998630 | Sensitive | lineage6.2.3 | None | SRR998628 | Sensitive | lineage6.2.3 | None | SRR8649120 | Sensitive | lineage6.2.3 | None | ERR11067442 | Sensitive | lineage6.2.3 | None | ERR028364 | Sensitive | lineage6.2.1 | None | SRR8649122 | Other | lineage4.7 | None | ERR10680082 | MDR-TB | lineage6.2.2 | None | ERR10680079 | MDR-TB | lineage6.2.2 | None | ERR10680081 | MDR-TB | lineage6.2.2 | None | ERR10680115 | RR-TB | lineage6.2.3 | None | ERR10680108 | MDR-TB | lineage6.2.3 | None | ERR10680114 | RR-TB | lineage6.2.3 | None | ERR10680128 | MDR-TB | lineage6.2.2 | None | ERR10680122 | MDR-TB | lineage6.2.2 | None | ERR10680134 | MDR-TB | lineage6.2.2 | None | ERR10680126 | MDR-TB | lineage6.2.2 | None | ERR10680147 | MDR-TB | lineage6.2.2 | None | ERR10680165 | MDR-TB | lineage6.2.2 | None | ERR10680206 | RR-TB | lineage6.2.2 | None | ERR10680166 | MDR-TB | lineage6.2.2 | None | ERR10680186 | MDR-TB | lineage6.2.2 | None | ERR10796630 | HR-TB | None | ERR10680214 | MDR-TB | lineage6.2.2 | None | ERR10680203 | MDR-TB | lineage6.2.2 | None | ERR11049116 | Sensitive | lineage6.2.3 | None | ERR11044307 | Sensitive | lineage4.7 | None | ERR11043716 | Sensitive | lineage4.7 | None | ERR11043934 | Sensitive | lineage4.7 | None | ERR10849240 | Sensitive | lineage6.2.3 | None | ERR11043348 | Sensitive | lineage6.2.2 | None | ERR11043636 | MDR-TB | lineage4.7 | None | ERR11044594 | Sensitive | lineage4.7 | None | ERR11044391 | Sensitive | lineage6.2.2 | None | ERR11044630 | Sensitive | lineage6.2.3 | None | ERR11044627 | MDR-TB | lineage6.2.2 | None | ERR330676 | Sensitive | lineage4.7 | None | ERR11044932 | Sensitive | lineage4.7 | None | ERR11044960 | Sensitive | lineage4.7 | None | ERR1203062 | Other | lineage6.2.3 | gh | ERR3801616 | Sensitive | lineage6.2.3 | None | ERR3801002 | Sensitive | lineage6.2.3 | None | ERR3801623 | Sensitive | lineage6.2.3 | None | ERR3800960 | Other | lineage6.2.3 | None | ERR3803811 | Sensitive | lineage6.2.3 | None | ERR3803791 | Other | lineage6.2.3 | None | ERR3801624 | Sensitive | lineage6.2.2 | None | ERR3804007 | Sensitive | lineage6.2.3 | None | ERR3803909 | Sensitive | lineage6.2 | None | ERR3803966 | Other | lineage6.2.3 | None | ERR3803993 | Sensitive | lineage6.2.3 | None | ERR3804029 | Sensitive | lineage6.2.3 | None | ERR3804022 | Sensitive | lineage6.2.3 | None | ERR3804018 | Sensitive | lineage6.2.3 | None | ERR3804105 | Other | lineage6.2;lineage6.1 | None | ERR3804108 | Sensitive | lineage6.2.2 | None | ERR3804153 | Sensitive | lineage6.2.3 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR3804120 | Sensitive | lineage6.2.2 | None | ERR3806652 | Sensitive | lineage6.2.2 | None | ERR3806456 | Sensitive | lineage6.2.3 | None | ERR3804158 | Sensitive | lineage6.2.3 | None | ERR3806447 | Sensitive | lineage6.2.2 | None | ERR3806621 | Sensitive | lineage6.2.2 | None | ERR3806836 | Sensitive | lineage6.2.3 | None | ERR3806644 | Sensitive | lineage6.2.2 | None | ERR4162020 | Sensitive | lineage6.2.2 | None | ERR3806845 | Sensitive | lineage6.2.3 | None | ERR4162016 | Sensitive | lineage6.2 | None | ERR4162021 | Sensitive | lineage6.2.3 | None | ERR4162022 | Sensitive | lineage6.2.2 | None | ERR400323 | Sensitive | lineage6.2 | None | ERR4162015 | Sensitive | lineage6.2 | None | ERR4192382 | Sensitive | lineage6.2.2 | None | ERR4192357 | Sensitive | lineage6.2.3 | None | ERR4192378 | Sensitive | lineage6.2.3 | None | ERR4192377 | Sensitive | lineage6.2.3 | None | ERR4192566 | Sensitive | lineage6.2.3 | None | ERR5866539 | MDR-TB | lineage2.2.1 | None | ERR4195221 | Sensitive | lineage6.2.2 | None | ERR4192564 | Sensitive | lineage6.2.3 | None | ERR4192565 | Sensitive | lineage6.2.3 | None | ERR4195418 | Sensitive | lineage6.2.2 | None | ERR11049478 | Sensitive | lineage6.2.3 | None | ERR702406 | HR-TB | None | ERR5979531 | Sensitive | lineage4.7 | None | ERR702401 | Sensitive | lineage6.2.1 | gh | ERR9787060 | Sensitive | lineage6.2.3 | None | ERR702425 | Sensitive | lineage6.2.1 | gh | ERR751297 | Sensitive | lineage6.2.1 | gh | ERR751341 | Sensitive | lineage6.2.1 | gh | ERR11050062 | Sensitive | lineage6.2.3 | None | ERR9121451 | Sensitive | lineage6.2.2 | None | ERR9787027 | Sensitive | lineage6.2 | None | ERR736839 | Other | None | ERR751332 | Sensitive | lineage6.2.1 | None | ERR9787040 | Other | lineage6.2.3 | None | ERR9787055 | Sensitive | lineage6.2.3 | None | ERR9787213 | Sensitive | lineage6.2.2 | None | ERR9787121 | Other | lineage6.2.3 | None | ERR9787143 | Sensitive | lineage6.2.3 | None | ERR9787191 | Sensitive | lineage6.2.2 | None | ERR9787222 | Sensitive | lineage6.2.3 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | ERR9787085 | Sensitive | lineage6.2.3 | None | ERR9787116 | Other | lineage6.2.3 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR9787150 | Sensitive | lineage6.2.2 | None | ERR9787178 | Sensitive | lineage6.2.3 | None | ERR9787190 | Other | lineage6.2;lineage6.1 | None | ERR9787226 | Sensitive | lineage6.2 | None | ERR9787228 | Sensitive | lineage6.2.3 | None | ERR9787229 | Sensitive | lineage6.2.3 | None | ERR9787218 | Sensitive | lineage6.2.2 | None | ERR9787240 | Sensitive | lineage6.2.3 | None | ERR9787245 | Sensitive | lineage6.2.3 | None | ERR9787249 | Sensitive | lineage6.2.3 | None | ERR9787261 | Sensitive | lineage6.2.3 | None | ERR9787268 | Other | lineage6.2;lineage6.1.3 | None | ERR9787287 | Sensitive | lineage6.2.3 | None | ERR9787271 | Sensitive | lineage6.2.3 | None | ERR9787275 | Sensitive | lineage6.2.2 | None | ERR9787306 | Sensitive | lineage6.2.2 | None | ERR9787288 | Sensitive | lineage6.2.3 | None | ERR9787280 | Sensitive | lineage6.2.2 | None | ERR9787305 | Sensitive | lineage6.2.3 | None | ERR9787313 | Sensitive | lineage6.2.3 | None | ERR9787315 | Sensitive | lineage6.2.2 | None | ERR9787379 | Sensitive | lineage6.2.3 | None | ERR9787342 | Sensitive | lineage6.2.3 | None | ERR9787339 | Sensitive | lineage6.2;lineage6.1.1 | None | ERR11050319 | Sensitive | lineage6.2 | None | ERR9894636 | Sensitive | lineage6.2.3 | None | ERR11050232 | Sensitive | lineage6.2.3 | None | SRR1103551 | Sensitive | lineage6.2.1 | None | SRR1144727 | MDR-TB | lineage4.7 | None | SRR1144829 | MDR-TB | lineage4.7 | None | SRR1146374 | MDR-TB | lineage4.7 | None | SRR1146382 | MDR-TB | lineage4.7 | None | SRR10809150 | Sensitive | lineage4.7 | None | ERR11050297 | Sensitive | lineage6.2.3 | None | SRR1162788 | Sensitive | lineage6.2.1 | None | SRR1163361 | MDR-TB | lineage4.7 | None | SRR1162470 | Sensitive | lineage6.2.1 | None | SRR1162810 | MDR-TB | lineage4.7 | None | SRR1163320 | MDR-TB | lineage4.7 | None | ERR11050354 | Sensitive | lineage4.7 | None | SRR1166923 | MDR-TB | lineage4.7 | None | ERR11050475 | Sensitive | lineage4.7 | None | ERR11050545 | Sensitive | lineage4.7 | None | SRR12416846 | MDR-TB | lineage4.7 | None | SRR13180263 | HR-TB | lineage6.2.2 | None | SRR18911453 | Sensitive | lineage6.2.2 | None | SRR18911881 | Sensitive | lineage6.2.3 | None | SRR2101114 | Sensitive | lineage4.7 | None | SRR19303866 | Sensitive | lineage4.7 | None |
---|