Rv3696c - c.1446A>C


Drug resistance types
3 Sensitive 3 RR-TB 6 HR-TB 76 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 1 Other
lineage Counts
lineage Count
lineage6.3.3 12
M.canetti;lineage2.1;lineage4.9 12
La3;M.canetti;lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.2.BCG 1
lineage2.2.1 37
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.1 1
lineage2.1;lineage4.9 2
lineage2.1;lineage2.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 97
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR10680088 MDR-TB lineage6.3.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR551070 HR-TB lineage6.3.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4798262 HR-TB La1.2.BCG None
SRR24256177 MDR-TB lineage2.2.1 None
ERR10680200 MDR-TB lineage6.3.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10680188 MDR-TB lineage6.3.3 None
ERR10680102 MDR-TB lineage6.3.3 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11044091 MDR-TB lineage2.2.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2307595 MDR-TB lineage2.2.1 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2307542 MDR-TB lineage2.2.1 None
ERR10680178 MDR-TB lineage6.3.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR10680201 MDR-TB lineage6.3.3 None
ERR3639751 XDR-TB lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR24256353 Pre-XDR-TB lineage2.2.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR24256154 Pre-XDR-TB lineage2.2.1 None
SRR18714909 MDR-TB lineage2.2.1 None
ERR5865868 Pre-XDR-TB lineage2.2.1 None
SRR10315524 Sensitive lineage2.2.1 None
SRR18714832 MDR-TB lineage2.2.1 None
ERR10680174 MDR-TB lineage6.3.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6256971 Pre-XDR-TB lineage2.2.1 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR10680151 MDR-TB lineage6.3.3 None
ERR10680002 MDR-TB lineage6.3.3 None
SRR6831888 MDR-TB lineage2.2.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR24256175 MDR-TB lineage2.2.1 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5865867 Pre-XDR-TB lineage2.2.1 None
SRR6832798 MDR-TB lineage2.2.1 None
ERR10680060 MDR-TB lineage6.3.3 None
ERR4822295 MDR-TB lineage2.2.1 de
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2307548 MDR-TB lineage2.2.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10877865 MDR-TB lineage2.2.1 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8773606 MDR-TB lineage2.2.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR2516327 MDR-TB lineage2.2.1 be
SRR6831749 MDR-TB lineage2.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR24256231 MDR-TB lineage2.2.1 None
SRR14782739 MDR-TB lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2677433 MDR-TB lineage2.2.1 de
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11349190 Sensitive lineage2.2.1 None
SRR18715075 MDR-TB lineage2.2.1 None
ERR8773608 MDR-TB lineage2.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11081995 XDR-TB lineage2.2.1 None
SRR24256285 MDR-TB lineage2.2.1 None
SRR6832746 MDR-TB lineage2.2.1 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11082858 MDR-TB lineage2.2.1 None
SRR6256974 Pre-XDR-TB lineage2.2.1 None
SRR6832442 MDR-TB lineage2.2.1 None
ERR2307514 MDR-TB lineage2.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR10315525 Sensitive lineage2.2.1 None
SRR6831710 MDR-TB lineage2.2.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR10680052 MDR-TB lineage6.3.3 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None