Rv3696c - c.1488T>C
Drug resistance types
32 Sensitive
0 RR-TB
18 HR-TB
13 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 43 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 5 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 6 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821360 | Sensitive | lineage4.1.2.1 | None | ERR4815860 | Sensitive | lineage4.1.2.1 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4819963 | Other | lineage4.1.2.1 | gb | ERR4819985 | Sensitive | lineage4.1.2.1 | None | ERR4817811 | Sensitive | lineage4.1.2.1 | None | ERR4821944 | Sensitive | lineage4.1.2.1 | gb | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4815970 | Sensitive | lineage4.1.2.1 | gb | ERR4817115 | Sensitive | lineage4.1.2.1 | None | ERR4818417 | Sensitive | lineage4.1.2.1 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815590 | Sensitive | lineage4.1.2.1 | None | ERR4819777 | Sensitive | lineage4.1.2.1 | gb | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4821391 | Sensitive | lineage4.1.2.1 | gb | ERR4818171 | Sensitive | lineage4.1.2.1 | None | ERR4819297 | Sensitive | lineage4.1.2.1 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4819715 | Sensitive | lineage4.1.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4817353 | Other | lineage4.1.2.1 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815585 | Sensitive | lineage4.1.2.1 | gb | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4815410 | Sensitive | lineage4.1.2.1 | gb | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816319 | Sensitive | lineage4.1.2.1 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4814649 | Sensitive | lineage4.1.2.1 | gb | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4820012 | Sensitive | lineage4.1.2.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4819943 | Sensitive | lineage4.1.2.1 | gb | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815409 | Sensitive | lineage4.1.2.1 | gb | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4821036 | Sensitive | lineage4.1.2.1 | gb | ERR4820232 | Sensitive | lineage4.1.2.1 | gb | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4815191 | Sensitive | lineage4.1.2.1 | gb | ERR4818332 | Sensitive | lineage4.1.2.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4822152 | Sensitive | lineage4.1.2.1 | gb | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4817895 | Other | lineage4.1.2.1 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4818192 | Other | lineage4.1.2.1 | gb | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11081592 | Sensitive | lineage4.1.2.1 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819344 | Sensitive | lineage4.1.2.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4821804 | Sensitive | lineage4.1.2.1 | gb | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4817910 | Sensitive | lineage4.1.2.1 | gb | ERR4819731 | Sensitive | lineage4.1.2.1 | gb |
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