Rv3793 - c.945C>T
Drug resistance types
19 Sensitive
0 RR-TB
16 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.2 | 29 |
| lineage3 | 1 |
| lineage1.1.2 | 5 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 4 |
| lineage1.1.3.2;lineage3.1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21732650 | Sensitive | lineage1.1.3.2 | None | ERR990545 | Other | lineage3 | None | SRR1183160 | HR-TB | lineage1.1.2 | None | SRR28045592 | Sensitive | lineage1.1.3.2 | None | SRR21714181 | Sensitive | lineage1.1.3.2 | None | SRR2099964 | HR-TB | lineage1.1.3.2 | None | SRR1169565 | HR-TB | lineage1.1.2 | None | SRR29772808 | MDR-TB | lineage1.1.3.2 | None | SAMN02599109 | HR-TB | lineage1.1.3.2 | in | SRR1173674 | HR-TB | lineage1.1.3.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR21732889 | Sensitive | lineage1.1.3.2 | None | SRR28046191 | Sensitive | lineage1.1.3.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR2100196 | HR-TB | lineage1.1.3.2 | None | SRR26558619 | HR-TB | lineage1.1.3.2 | None | SRR17406759 | Sensitive | lineage1.1.3.2 | None | ERR270671 | HR-TB | lineage1.1.3.2 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR26112727 | Sensitive | lineage1.1.3.2 | None | SRR28046022 | Sensitive | lineage1.1.3.2 | None | SRR28045763 | Sensitive | lineage1.1.3.2 | None | SRR28045896 | Sensitive | lineage1.1.3.2 | None | ERR4050135 | Sensitive | lineage1.1.3.2 | None | SRR1173807 | HR-TB | lineage1.1.3.2 | None | SRR18149496 | Sensitive | lineage1.1.3.2 | None | SRR28046020 | Sensitive | lineage1.1.3.2 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR117627 | HR-TB | lineage1.1.3.2 | None | SRR25827574 | MDR-TB | lineage1.1.3.2;lineage3.1.2 | None | ERR3283032 | Other | lineage4.9 | None | SRR1180248 | HR-TB | lineage1.1.2 | None | SRR22249990 | Sensitive | lineage1.1.3.2 | None | SAMN02598959 | HR-TB | lineage1.1.2 | in | SRR11972323 | Other | lineage1.1.3.2 | None | ERR2513400 | Sensitive | lineage1.1.3.2 | gb | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR400455 | Sensitive | lineage1.1.3.2 | gb | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR16058545 | Sensitive | lineage1.1.3.2 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR29126683 | Other | lineage1.1.3.2 | None | ERR9125764 | Sensitive | lineage1.1.3.2 | None | SRR1172316 | HR-TB | lineage1.1.2 | None |
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