Rv3794 - c.-16C>A


Drug resistance types
2 Sensitive 5 RR-TB 1 HR-TB 86 MDR-TB 43 Pre-XDR-TB 2 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.3.3 13
lineage4.4.2 5
lineage2.2.1 53
lineage4;lineage2.2.1 1
lineage1.2.1.2.1 1
lineage4.6.1.2 24
lineage4.2.2.2 1
lineage4.6.1.1 3
lineage4.3.2.1 2
lineage3.1.2.1 1
lineage3 7
lineage4.1.3 2
lineage4;lineage3 1
lineage4.1.1.1 1
lineage5.1.1 2
lineage4.4.1.1 1
lineage5.1.5 2
lineage4.8 1
lineage4.2.1 1
lineage2.2 3
lineage4.1.2.1.1 1
lineage4.3.4.2 2
lineage4.1.1.3 1
lineage2.2.2 1
lineage4.2.2 2
lineage4.3.4.1 5
lineage4.1.2.1 1
lineage2.2.1;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 139
Geographic prevalence
Country level data for this variant is available for 95 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4813208 Pre-XDR-TB lineage4.3.3 pe
SRR671749 MDR-TB lineage4.4.2 cn
ERR7911738 MDR-TB lineage2.2.1 us
ERR4798868 Pre-XDR-TB lineage4;lineage2.2.1 in
ERR4831947 MDR-TB lineage2.2.1 vn
ERR067709 MDR-TB lineage2.2.1 ru
SRR6824286 Pre-XDR-TB lineage2.2.1 cn
ERR4813445 Pre-XDR-TB lineage4.3.3 None
ERR718387 MDR-TB lineage1.2.1.2.1 th
SRR5709921 MDR-TB lineage2.2.1 th
ERR2707095 MDR-TB lineage4.6.1.2 cd
ERR6358958 MDR-TB lineage4.6.1.2 None
ERR6359068 MDR-TB lineage4.6.1.2 None
ERR4799246 Pre-XDR-TB lineage2.2.1 in
SRR5818577 MDR-TB lineage4.2.2.2 dj
ERR6359040 MDR-TB lineage4.6.1.2 None
ERR6359047 MDR-TB lineage4.6.1.2 None
ERR4796383 Pre-XDR-TB lineage2.2.1 in
ERR6358846 MDR-TB lineage4.6.1.1 None
ERR6359092 MDR-TB lineage4.6.1.2 None
ERR7911388 Pre-XDR-TB lineage2.2.1 us
ERR6359096 MDR-TB lineage4.6.1.2 None
ERR4831607 MDR-TB lineage2.2.1 vn
ERR1193898 MDR-TB lineage4.3.2.1 sz
ERR4822331 MDR-TB lineage4.3.3 de
SRR1723498 MDR-TB lineage2.2.1 cn
ERR2707076 MDR-TB lineage4.6.1.2 cd
ERR4830980 MDR-TB lineage3.1.2.1 np
ERR4798269 Pre-XDR-TB lineage2.2.1 in
SRR5341316 XDR-TB lineage2.2.1 in
ERR4830760 MDR-TB lineage3 ir
ERR6359041 MDR-TB lineage4.6.1.2 None
SAMN02419565 Pre-XDR-TB lineage2.2.1 by
ERR108490 Sensitive lineage2.2.1 ru
SAMN02419602 Pre-XDR-TB lineage2.2.1 by
ERR1679586 MDR-TB lineage4.1.3 ng
ERR6358830 MDR-TB lineage4.6.1.2 None
ERR3275604 MDR-TB lineage2.2.1 nl
ERR8665578 Pre-XDR-TB lineage2.2.1 None
ERR2510490 Pre-XDR-TB lineage3 pk
ERR4811111 Pre-XDR-TB lineage2.2.1 cn
SRR6824312 MDR-TB lineage2.2.1 cn
ERR4822598 MDR-TB lineage4.3.3 de
ERR553350 MDR-TB lineage4.3.2.1 sz
ERR4800360 Pre-XDR-TB lineage2.2.1 in
ERR8665944 Pre-XDR-TB lineage2.2.1 None
ERR6358870 RR-TB lineage4.6.1.1 None
ERR4796730 Pre-XDR-TB lineage2.2.1 in
ERR2516827 MDR-TB lineage4;lineage3 gb
ERR1034981 MDR-TB lineage4.1.1.1 za
ERR6359029 MDR-TB lineage4.6.1.2 None
ERR751313 MDR-TB lineage5.1.1 gh
ERR551014 MDR-TB lineage4.4.1.1 sz
SRR6824347 RR-TB lineage4.4.2 cn
ERR4800193 Pre-XDR-TB lineage2.2.1 in
SAMEA2533971 MDR-TB lineage2.2.1 uz
ERR1215480 MDR-TB lineage5.1.5 gh
ERR6359097 MDR-TB lineage4.6.1.2 None
ERR553238 MDR-TB lineage2.2.1 de
SAMN02231161 Pre-XDR-TB lineage4.1.3 ml
ERR1215474 MDR-TB lineage5.1.1 gh
ERR4796771 Pre-XDR-TB lineage2.2.1 in
ERR8665945 Pre-XDR-TB lineage2.2.1 None
ERR2517484 MDR-TB lineage2.2.1 nl
ERR6358832 MDR-TB lineage4.6.1.2 None
ERR2229363 Sensitive lineage4.8 None
ERR6358943 MDR-TB lineage4.6.1.2 None
ERR6358715 MDR-TB lineage4.6.1.2 None
ERR1203070 MDR-TB lineage5.1.5 gh
ERR502959 RR-TB lineage4.4.2 None
SRR5341353 XDR-TB lineage2.2.1 in
SAMN02419547 MDR-TB lineage2.2.1 by
ERR4831973 MDR-TB lineage2.2.1 vn
ERR2179644 RR-TB lineage4.4.2 cn
SRR5709935 Pre-XDR-TB lineage2.2.1 th
SRR1723976 RR-TB lineage4.4.2 cn
ERR4830780 MDR-TB lineage4.3.3 ir
ERR7911022 MDR-TB lineage4.2.1 None
ERR4830649 MDR-TB lineage2.2.1 None
ERR7910955 MDR-TB lineage2.2 None
ERR760879 MDR-TB lineage4.1.2.1.1 ar
SRR23310968 MDR-TB lineage2.2 None
SRR20139563 Pre-XDR-TB lineage4.3.4.2 None
SRR20969999 MDR-TB lineage4.1.1.3 None
SRR23310936 Pre-XDR-TB lineage2.2 None
SRR5817472 Pre-XDR-TB lineage2.2.1 au
ERR2516419 MDR-TB lineage4.3.3 nl
ERR4829128 MDR-TB lineage3 pk
ERR4822399 Pre-XDR-TB lineage4.3.4.2 ua
ERR2516459 MDR-TB lineage2.2.1 nl
ERR3287855 Pre-XDR-TB lineage4.3.3 pe
SRR671855 Pre-XDR-TB lineage2.2.2 cn
ERR4828817 MDR-TB lineage2.2.1 None
SRR6257088 MDR-TB lineage2.2.1 None
ERR4828411 MDR-TB lineage2.2.1 vn
ERR6359057 MDR-TB lineage4.6.1.2 None
ERR2677404 MDR-TB lineage4.3.3 de
ERR144636 Pre-XDR-TB lineage2.2.1 ru
ERR4798568 Pre-XDR-TB lineage4.2.2 in
ERR133919 MDR-TB lineage2.2.1 ru
SRR8651658 Pre-XDR-TB lineage2.2.1 cn
ERR6358955 MDR-TB lineage4.6.1.2 None
SRR671826 Pre-XDR-TB lineage2.2.1 cn
SRR6257069 HR-TB lineage2.2.1 None
ERR4822380 Pre-XDR-TB lineage4.3.3 kg
ERR133910 Pre-XDR-TB lineage2.2.1 ru
ERR4800205 Pre-XDR-TB lineage4.3.3 in
ERR6358847 MDR-TB lineage4.6.1.1 None
ERR2514633 MDR-TB lineage4.3.4.1 gb
ERR275198 MDR-TB lineage4.3.4.1 pt
ERR2510699 Pre-XDR-TB lineage3 pk
ERR067622 MDR-TB lineage2.2.1 ru
ERR6358919 MDR-TB lineage4.6.1.2 None
DRR184607 MDR-TB lineage2.2.1 vn
SAMN02419587 Pre-XDR-TB lineage2.2.1 by
ERR4831938 MDR-TB lineage2.2.1 None
ERR1199110 MDR-TB lineage4.6.1.2 cd
ERR2707091 MDR-TB lineage4.6.1.2 cd
ERR4828900 MDR-TB lineage4.1.2.1 None
ERR2516890 MDR-TB lineage3 gb
ERR2510477 Pre-XDR-TB lineage3 pk
ERR2707230 MDR-TB lineage4.3.4.1 cd
SRR1723739 Pre-XDR-TB lineage2.2.1 cn
ERR6359100 MDR-TB lineage4.6.1.2 None
ERR4831447 Pre-XDR-TB lineage3 None
ERR4800221 Pre-XDR-TB lineage2.2.1;lineage1.1.2 in
ERR8665902 Pre-XDR-TB lineage2.2.1 None
ERR6358962 MDR-TB lineage4.6.1.2 None
ERR067599 MDR-TB lineage4.3.3 ru
ERR1036281 MDR-TB lineage4.3.4.1 pt
ERR6358989 MDR-TB lineage4.6.1.2 None
ERR4800090 Pre-XDR-TB lineage4.2.2 in
ERR4797738 Pre-XDR-TB lineage4.3.3 in
ERR4822311 MDR-TB lineage4.3.3 None
SRR5065524 MDR-TB lineage2.2.1 vn
ERR2707077 MDR-TB lineage4.6.1.2 cd
ERR4822351 MDR-TB lineage2.2.1 None
ERR1035204 MDR-TB lineage4.3.4.1 pt
ERR2446458 MDR-TB lineage2.2.1 nl