Rv3794 - c.-16C>A


Drug resistance types
2 Sensitive 8 RR-TB 21 HR-TB 343 MDR-TB 170 Pre-XDR-TB 25 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.2 6
lineage4.4.1.1 5
lineage4.1.3 13
lineage2.2.1 240
lineage4.3.3 97
lineage4.1.2.1 12
lineage3.1.2.1 4
lineage2.2.1.1 19
lineage4.2.2.2 12
lineage4 5
lineage4.3.4.2 3
lineage3 27
lineage4.6.2.2 2
lineage4.3.4.2.1 2
lineage4.8 9
lineage4.6.1.2 32
lineage4.2.1 4
lineage2.2.1.2 1
lineage4.3.2.1 2
lineage4.4.2 8
lineage4.1.1.3 13
lineage4.3.4.1 7
lineage2.2.1;lineage4 3
lineage1.1.2;lineage2.2.1 2
lineage3.1 1
lineage4.1.1.1 4
lineage4.1.2;lineage4.3.3 1
lineage2.2.1;lineage3.1.2 1
lineage4.2.2.1 2
lineage2.2.1.1;lineage4.2.2 1
lineage1.2.1.2.1 2
lineage2.2.1;lineage4.3.3 4
lineage3.1.2 2
lineage4.2.2 2
lineage2.2.1;lineage4.2.1 1
lineage4.6.1.1 3
lineage4.5 1
lineage4.1.2.1.1 1
lineage1.1.2;lineage3 1
lineage2.2.1;lineage4.1.1 1
lineage1.2.2.2;lineage2.2.1 2
lineage1.1.1.1 1
lineage1.1.1;lineage2.2.1 1
lineage4.1.3;lineage6.3.1 1
lineage2.2.1;lineage2.2.2 1
lineage5.1.1 2
lineage1.1.1 1
lineage5.1.5 2
lineage1.2.2.2;lineage3 1
lineage3;lineage4 1
lineage4.1.1 1
lineage2.2.1.1;lineage3 1
spoligotype Counts
spoligotype Count
None 571
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR13297994 MDR-TB lineage2.2.2 None
SRR9588027 MDR-TB lineage4.4.1.1 None
ERR4423539 HR-TB lineage4.1.3 None
SRR11662673 MDR-TB lineage2.2.1 None
ERR13284923 MDR-TB lineage4.3.3 None
SRR29539573 MDR-TB lineage4.3.3 None
ERR2653179 MDR-TB lineage4.1.2.1 None
ERR8773999 HR-TB lineage2.2.1 None
SRR1184123 Pre-XDR-TB lineage2.2.1 None
ERR4828817 MDR-TB lineage2.2.1 None
ERR4830980 MDR-TB lineage3.1.2.1 np
SRR11972316 Pre-XDR-TB lineage2.2.1.1 None
SRR3085331 MDR-TB lineage4.2.2.2 None
ERR13285122 MDR-TB lineage4.3.3 None
ERR13284762 MDR-TB lineage4.3.3 None
ERR403301 Pre-XDR-TB lineage2.2.1 None
ERR4553448 MDR-TB lineage4 None
ERR4822399 Pre-XDR-TB lineage4.3.4.2 ua
ERR8773735 HR-TB lineage2.2.1 None
SRR1181045 MDR-TB lineage2.2.1 None
SRR25827736 XDR-TB lineage3 None
ERR4872154 Pre-XDR-TB lineage4.6.2.2 None
ERR5864565 MDR-TB lineage2.2.1 None
SRR25207397 Pre-XDR-TB lineage2.2.1 None
ERR3077958 RR-TB lineage4.3.4.2.1 None
SRR28706657 MDR-TB lineage4.3.3 None
SRR29289364 Pre-XDR-TB lineage3 None
ERR11083065 MDR-TB lineage4.8 None
ERR552424 MDR-TB lineage4.3.3 None
SRR25206994 Pre-XDR-TB lineage2.2.1 None
SRR26936932 MDR-TB lineage2.2.1.1 None
SRR26936929 MDR-TB lineage2.2.1 None
SRR24710243 Pre-XDR-TB lineage4.3.3 None
SRR6824286 Pre-XDR-TB lineage2.2.1 cn
SRR23310968 MDR-TB lineage2.2.1 None
SRR16088044 MDR-TB lineage4.3.3 None
ERR13281471 MDR-TB lineage4.3.3 None
SRR29289157 XDR-TB lineage3 None
SRR24710152 Pre-XDR-TB lineage2.2.1 None
SRR25207055 XDR-TB lineage2.2.1.1 None
SRR29231747 MDR-TB lineage4.6.1.2 None
ERR11043659 MDR-TB lineage4.3.3 None
ERR2707077 MDR-TB lineage4.6.1.2 cd
ERR11798750 MDR-TB lineage4.2.1 None
ERR5865731 Pre-XDR-TB lineage2.2.1 None
SRR25207126 MDR-TB lineage2.2.1.2 None
SRR6964507 MDR-TB lineage3 None
ERR553350 MDR-TB lineage4.3.2.1 sz
ERR6359047 MDR-TB lineage4.6.1.2 None
ERR133919 MDR-TB lineage2.2.1 ru
SRR1723976 RR-TB lineage4.4.2 cn
SRR10040450 MDR-TB lineage2.2.1 None
SRR23310936 Pre-XDR-TB lineage2.2.1 None
ERR11082408 MDR-TB lineage4.3.3 None
ERR11488399 MDR-TB lineage4.1.1.3 None
ERR11798613 MDR-TB lineage2.2.1 None
ERR2677404 MDR-TB lineage4.3.3 de
ERR4828900 MDR-TB lineage4.1.2.1 None
ERR4831973 MDR-TB lineage2.2.1 vn
ERR6359092 MDR-TB lineage4.6.1.2 None
ERR144636 Pre-XDR-TB lineage2.2.1 ru
SRR29274024 Pre-XDR-TB lineage4.1.2.1 None
SRR671826 Pre-XDR-TB lineage2.2.1 cn
SRR21277270 MDR-TB lineage4.4.2 None
SRR25827601 XDR-TB lineage2.2.1.1 None
ERR11081039 MDR-TB lineage4.8 None
SRR7517764 MDR-TB lineage4.3.3 None
ERR7737881 MDR-TB lineage2.2.1 None
SRR5153086 Pre-XDR-TB lineage2.2.1 None
ERR8773733 HR-TB lineage2.2.1 None
ERR7910955 MDR-TB lineage2.2.1 None
ERR13284199 MDR-TB lineage4.3.3 None
ERR552425 MDR-TB lineage4.3.3 None
ERR13276377 MDR-TB lineage4.3.3 None
ERR13284388 MDR-TB lineage4.3.3 None
ERR1227526 MDR-TB lineage4.3.4.1 None
SRR6785479 MDR-TB lineage2.2.1 None
SRR14801647 Pre-XDR-TB lineage2.2.1 None
SRR28393746 MDR-TB lineage4.1.1.3 None
SRR28706662 MDR-TB lineage4.3.3 None
DRR130140 MDR-TB lineage2.2.1 None
ERR13260431 Other lineage2.2.1 None
ERR1193898 MDR-TB lineage4.3.2.1 sz
SRR1723739 Pre-XDR-TB lineage2.2.1 cn
ERR8774127 MDR-TB lineage4.1.3 None
SRR11662207 MDR-TB lineage2.2.1 None
SRR24710273 MDR-TB lineage2.2.1 None
ERR4276857 MDR-TB lineage4.3.3 None
SRR14782799 HR-TB lineage2.2.1 None
SRR11662257 MDR-TB lineage2.2.1 None
SRR11662570 Pre-XDR-TB lineage2.2.1 None
SRR29230791 MDR-TB lineage4.6.1.2 None
ERR11082039 Pre-XDR-TB lineage4.3.3 None
SRR14801330 MDR-TB lineage2.2.1;lineage4 None
DRR130128 MDR-TB lineage2.2.1 None
ERR5864583 MDR-TB lineage2.2.1 None
ERR9993055 XDR-TB lineage2.2.1 None
ERR4800221 HR-TB lineage1.1.2;lineage2.2.1 in
ERR4813208 Pre-XDR-TB lineage4.3.3 pe
DRR184607 MDR-TB lineage2.2.1 vn
SRR10147683 MDR-TB lineage4.3.3 None
SRR10303296 MDR-TB lineage4.3.3 None
ERR2653055 Pre-XDR-TB lineage4.1.2.1 None
ERR4423540 MDR-TB lineage4.1.3 None
SRR11662720 Pre-XDR-TB lineage2.2.1 None
ERR1036281 MDR-TB lineage4.3.4.1 pt
ERR4553454 MDR-TB lineage3.1 None
ERR5864585 MDR-TB lineage2.2.1 None
ERR3078015 MDR-TB lineage4.3.4.2.1 None
ERR11082336 MDR-TB lineage4.6.1.2 None
SRR998773 Pre-XDR-TB lineage4.1.3 None
ERR1035204 MDR-TB lineage4.3.4.1 pt
ERR5866463 MDR-TB lineage2.2.1 None
ERR11043059 MDR-TB lineage4.3.3 None
SRR25207394 Pre-XDR-TB lineage2.2.1 None
SRR11662566 MDR-TB lineage2.2.1 None
SRR20969899 MDR-TB lineage2.2.1 None
SRR1159738 Pre-XDR-TB lineage2.2.1 None
ERR4831947 MDR-TB lineage2.2.1 vn
ERR4830649 MDR-TB lineage2.2.1 None
ERR4800360 Pre-XDR-TB lineage2.2.1 in
ERR5864582 Pre-XDR-TB lineage2.2.1 None
SAMN02419587 Pre-XDR-TB lineage2.2.1 by
ERR6359096 MDR-TB lineage4.6.1.2 None
SRR14801597 Pre-XDR-TB lineage2.2.1 None
ERR8773902 MDR-TB lineage4.3.3 None
SRR1159790 Pre-XDR-TB lineage2.2.1 None
ERR9119556 Pre-XDR-TB lineage4.6.2.2 None
ERR4796481 Pre-XDR-TB lineage2.2.1 None
SRR15316426 MDR-TB lineage2.2.1 None
SRR998745 MDR-TB lineage4.1.3 None
ERR4796383 Pre-XDR-TB lineage2.2.1 in
ERR2179644 RR-TB lineage4.4.2 cn
ERR1654680 MDR-TB lineage4.6.1.2 None
SRR069943 MDR-TB lineage2.2.1.1 None
ERR4553670 MDR-TB lineage4 None
ERR9907751 Pre-XDR-TB lineage4.1.1.1 None
ERR9907726 Pre-XDR-TB lineage4.1.1.1 None
SRR11786874 MDR-TB lineage4.3.3 None
SRR1181019 Pre-XDR-TB lineage2.2.1 None
SRR29539559 MDR-TB lineage4.1.2;lineage4.3.3 None
ERR4798269 Pre-XDR-TB lineage2.2.1 in
SRR1159122 Pre-XDR-TB lineage2.2.1 None
ERR502959 RR-TB lineage4.4.2 None
ERR4011951 MDR-TB lineage4.2.2.2 None
ERR13258444 MDR-TB lineage2.2.1 None
SRR28351329 Pre-XDR-TB lineage2.2.1 None
SRR1162485 MDR-TB lineage2.2.1 None
SRR6964634 MDR-TB lineage3 None
SRR18593222 Pre-XDR-TB lineage4.2.2.2 None
ERR11068914 MDR-TB lineage4.3.3 None
SRR13232439 Pre-XDR-TB lineage2.2.1 None
ERR3639706 MDR-TB lineage4.3.3 None
SRR5153617 Pre-XDR-TB lineage2.2.1 None
ERR13285087 MDR-TB lineage4.3.3 None
SRR7517749 RR-TB lineage4.3.3 None
SRR25827868 Pre-XDR-TB lineage2.2.1;lineage3.1.2 None
ERR11081389 MDR-TB lineage4.2.2.1 None
SRR25827595 Pre-XDR-TB lineage2.2.1 None
SRR28868784 HR-TB lineage2.2.1 None
SRR14802066 Pre-XDR-TB lineage2.2.1 None
SRR25207136 MDR-TB lineage2.2.1 None
ERR11081319 MDR-TB lineage4.3.3 None
SRR29055614 MDR-TB lineage2.2.1 None
ERR4800161 Pre-XDR-TB lineage2.2.1.1 None
SRR25827530 XDR-TB lineage2.2.1;lineage4 None
ERR2517484 MDR-TB lineage2.2.1 nl
ERR7911738 MDR-TB lineage2.2.1 us
SRR11662697 Pre-XDR-TB lineage2.2.1.1;lineage4.2.2 None
SRR6807685 MDR-TB lineage2.2.1 None
SRR6832792 Sensitive lineage4.3.3 None
ERR067622 MDR-TB lineage2.2.1 ru
ERR11081117 MDR-TB lineage4.3.3 None
SRR15600382 MDR-TB lineage2.2.1.1 None
ERR13245253 XDR-TB lineage2.2.1 None
ERR718387 MDR-TB lineage1.2.1.2.1 th
ERR2307611 MDR-TB lineage2.2.1 None
SRR22461585 MDR-TB lineage4.3.3 None
ERR4800097 Pre-XDR-TB lineage3 None
SRR16186844 XDR-TB lineage2.2.1 None
SRR25207013 Pre-XDR-TB lineage2.2.1 None
ERR11776027 MDR-TB lineage4.3.3 None
SRR29017661 MDR-TB lineage4 None
SRR29016913 MDR-TB lineage3.1.2.1 None
SRR13232400 MDR-TB lineage2.2.1;lineage4.3.3 None
ERR2510699 Pre-XDR-TB lineage3 pk
SRR28351477 Pre-XDR-TB lineage2.2.1 None
SRR15276981 XDR-TB lineage3 None
SRR28393316 MDR-TB lineage4 None
SRR20969999 MDR-TB lineage4.1.1.3 None
ERR2707230 MDR-TB lineage4.3.4.1 cd
ERR12796608 Pre-XDR-TB lineage3.1.2 None
SRR22461701 HR-TB lineage4.1.2.1 None
SRR29289158 XDR-TB lineage3 None
ERR13266517 XDR-TB lineage2.2.1 None
SRR15600349 MDR-TB lineage2.2.1.1 None
ERR1679586 MDR-TB lineage4.1.3 ng
ERR13273367 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR13284234 MDR-TB lineage2.2.1 None
ERR11083066 MDR-TB lineage4.3.3 None
ERR11488626 MDR-TB lineage4.3.3 None
ERR5864567 MDR-TB lineage2.2.1 None
ERR4797738 Pre-XDR-TB lineage4.3.3 in
ERR10762355 MDR-TB lineage4.2.1 None
ERR11488730 MDR-TB lineage4.1.1.3 None
ERR3148042 MDR-TB lineage4.1.2.1 None
ERR3639815 MDR-TB lineage4.8 None
ERR4798568 Pre-XDR-TB lineage4.2.2 in
ERR5865950 MDR-TB lineage2.2.1 None
ERR5864576 MDR-TB lineage2.2.1 None
ERR11044488 Pre-XDR-TB lineage2.2.1.1 None
ERR6359057 MDR-TB lineage4.6.1.2 None
ERR6358962 MDR-TB lineage4.6.1.2 None
ERR4800193 Pre-XDR-TB lineage2.2.1 in
SRR25389550 Pre-XDR-TB lineage2.2.1 None
ERR1654684 MDR-TB lineage4.6.1.2 None
ERR11080933 MDR-TB lineage4.3.3 None
SRR24710249 MDR-TB lineage4.3.3 None
ERR2510477 Pre-XDR-TB lineage3 pk
SRR15276984 XDR-TB lineage3 None
SRR25207181 XDR-TB lineage2.2.1.1 None
ERR13290878 HR-TB lineage1.1.2;lineage2.2.1 None
ERR4828411 MDR-TB lineage2.2.1 vn
SRR6832495 MDR-TB lineage2.2.1 None
ERR11081185 MDR-TB lineage2.2.1 None
SRR29274163 MDR-TB lineage4.1.2.1 None
ERR9806615 Pre-XDR-TB lineage2.2.1 None
SRR7516333 Pre-XDR-TB lineage2.2.1 None
ERR13284847 MDR-TB lineage4.3.3 None
ERR13285168 MDR-TB lineage4.3.3 None
SRR24222955 MDR-TB lineage2.2.1 None
ERR4800205 Pre-XDR-TB lineage4.3.3 in
SRR5152954 MDR-TB lineage2.2.1 None
SRR14088394 MDR-TB lineage3 None
SRR6356942 MDR-TB lineage4.3.3 None
SRR28044338 Pre-XDR-TB lineage2.2.1 None
ERR11081013 MDR-TB lineage4.3.3 None
ERR11081224 MDR-TB lineage2.2.1;lineage4.2.1 None
ERR6358846 MDR-TB lineage4.6.1.1 None
ERR6358955 MDR-TB lineage4.6.1.2 None
ERR6358919 MDR-TB lineage4.6.1.2 None
SRR6257069 HR-TB lineage2.2.1 None
ERR7737644 MDR-TB lineage4.2.2.2 None
ERR4831938 MDR-TB lineage2.2.1 None
ERR11044294 MDR-TB lineage1.2.1.2.1 None
SRR29017234 Pre-XDR-TB lineage4 None
ERR5864571 MDR-TB lineage2.2.1 None
ERR8665702 Pre-XDR-TB lineage2.2.1 None
SRR12199484 MDR-TB lineage2.2.1 None
ERR4831447 Pre-XDR-TB lineage3 None
ERR8773998 HR-TB lineage2.2.1 None
ERR1199110 MDR-TB lineage4.6.1.2 cd
SRR7653080 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
SRR1159044 MDR-TB lineage2.2.1 None
ERR2707091 MDR-TB lineage4.6.1.2 cd
ERR7737890 MDR-TB lineage4.2.2.2 None
ERR13284722 MDR-TB lineage4.3.3 None
ERR3639717 Pre-XDR-TB lineage4.8 None
SRR14801915 MDR-TB lineage2.2.1 None
ERR6358989 MDR-TB lineage4.6.1.2 None
ERR11043621 MDR-TB lineage4.3.3 None
SRR10147705 MDR-TB lineage3 None
SRR21887756 Pre-XDR-TB lineage2.2.1 None
SRR11972341 Pre-XDR-TB lineage2.2.2 None
SRR28044336 Pre-XDR-TB lineage2.2.1.1 None
ERR5864573 MDR-TB lineage2.2.1 None
ERR11082330 Pre-XDR-TB lineage4.3.3 None
ERR4822380 Pre-XDR-TB lineage4.3.3 kg
ERR4811111 Pre-XDR-TB lineage2.2.1 cn
ERR11082476 MDR-TB lineage4.8 None
ERR13285909 MDR-TB lineage4.2.1 None
ERR4822351 MDR-TB lineage2.2.1 None
SRR671749 MDR-TB lineage4.4.2 cn
ERR13284672 MDR-TB lineage4.3.3 None
SRR25827822 MDR-TB lineage2.2.1.1 None
SRR069957 MDR-TB lineage2.2.1.1 None
ERR9027233 Pre-XDR-TB lineage3.1.2.1 None
ERR6358832 MDR-TB lineage4.6.1.2 None
ERR6358830 MDR-TB lineage4.6.1.2 None
ERR5864580 Pre-XDR-TB lineage2.2.1 None
ERR2707076 MDR-TB lineage4.6.1.2 cd
ERR5866263 MDR-TB lineage2.2.1 None
ERR7737919 MDR-TB lineage4.2.2.2 None
SRR6832028 MDR-TB lineage2.2.1 None
ERR8665945 Pre-XDR-TB lineage2.2.1 None
ERR553238 MDR-TB lineage2.2.1 de
ERR552422 MDR-TB lineage4.3.3 None
ERR6358958 MDR-TB lineage4.6.1.2 None
SRR10379895 MDR-TB lineage2.2.1 None
SRR23938665 MDR-TB lineage2.2.1 None
SRR24256063 Pre-XDR-TB lineage2.2.1 None
ERR11043267 MDR-TB lineage4.3.3 None
SRR24673550 HR-TB lineage2.2.1 None
SRR6831942 MDR-TB lineage2.2.1 None
SRR18714811 MDR-TB lineage2.2.1 None
ERR5865809 MDR-TB lineage4.3.3 None
ERR4822331 MDR-TB lineage4.3.3 de
SRR5153078 Pre-XDR-TB lineage2.2.1 None
SRR1723498 MDR-TB lineage2.2.1 cn
SRR29289155 XDR-TB lineage3 None
ERR13284579 MDR-TB lineage4.2.2.1 None
ERR2307495 MDR-TB lineage2.2.1 None
SRR12142388 Pre-XDR-TB lineage2.2.1 None
SRR11972386 MDR-TB lineage2.2.1 None
ERR11488922 Pre-XDR-TB lineage4.1.1.3 None
SRR10305961 MDR-TB lineage2.2.1 None
ERR11488857 Pre-XDR-TB lineage4.1.1.3 None
ERR5864570 MDR-TB lineage2.2.1 None
SRR1158950 Pre-XDR-TB lineage2.2.1 None
ERR11043817 MDR-TB lineage4.3.3 None
ERR551477_ERR551478 MDR-TB lineage2.2.1 None
SRR10379974 MDR-TB lineage2.2.1 None
SRR067516 MDR-TB lineage2.2.1.1 None
SRR14801500 MDR-TB lineage2.2.1 None
ERR4822598 MDR-TB lineage4.3.3 de
ERR2307533 MDR-TB lineage2.2.1 None
SRR5341316 XDR-TB lineage2.2.1 in
ERR7911388 Pre-XDR-TB lineage2.2.1 us
SRR29273674 Pre-XDR-TB lineage4.1.2.1 None
SRR6824347 RR-TB lineage4.4.2 cn
ERR4800153 Pre-XDR-TB lineage3 None
ERR4827652 MDR-TB lineage2.2.1 None
ERR5865732 Pre-XDR-TB lineage2.2.1 None
SRR12420707 MDR-TB lineage4.5 None
SRR998744 MDR-TB lineage4.1.3 None
SRR29289159 Pre-XDR-TB lineage3 None
ERR13284097 MDR-TB lineage4.8 None
SRR29681228 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
SRR25207142 Pre-XDR-TB lineage2.2.1 None
ERR4830834 MDR-TB lineage4.2.2.2 None
ERR5866262 MDR-TB lineage2.2.1 None
ERR6358847 MDR-TB lineage4.6.1.1 None
ERR6358943 MDR-TB lineage4.6.1.2 None
ERR6359068 MDR-TB lineage4.6.1.2 None
SRR6356996 Pre-XDR-TB lineage2.2.1 None
ERR10610098 Pre-XDR-TB lineage2.2.1 None
SRR28706385 MDR-TB lineage4.3.3 None
ERR2307528 MDR-TB lineage2.2.1 None
SRR15276985 Pre-XDR-TB lineage3 None
SRR998774 Pre-XDR-TB lineage4.1.3 None
SRR25827651 MDR-TB lineage2.2.1.1 None
ERR3275604 MDR-TB lineage2.2.1 nl
ERR5864563 MDR-TB lineage2.2.1 None
SAMEA2533971 MDR-TB lineage2.2.1 uz
SRR13243562 Pre-XDR-TB lineage2.2.1 None
SRR13232401 MDR-TB lineage4.3.3 None
SRR3082073 MDR-TB lineage4.2.2.2 None
ERR13284492 MDR-TB lineage2.2.1 None
SRR998747 MDR-TB lineage4.1.3 None
ERR11043624 MDR-TB lineage4.3.3 None
ERR11081570 Pre-XDR-TB lineage4.3.3 None
SRR29016919 MDR-TB lineage2.2.1 None
ERR5864569 MDR-TB lineage2.2.1 None
ERR10762247 MDR-TB lineage2.2.1 None
ERR2307398 MDR-TB lineage2.2.1 None
SRR6832486 MDR-TB lineage2.2.1 None
SRR25827714 Pre-XDR-TB lineage2.2.1.1 None
ERR2516890 MDR-TB lineage3 gb
SAMN02419565 Pre-XDR-TB lineage2.2.1 by
ERR4822311 MDR-TB lineage4.3.3 None
SRR1183663 Pre-XDR-TB lineage2.2.1 None
SRR1181007 Pre-XDR-TB lineage2.2.1 None
SRR8847016 MDR-TB lineage2.2.1 None
ERR760879 MDR-TB lineage4.1.2.1.1 ar
ERR11488963 Pre-XDR-TB lineage4.1.1.3 None
SRR23938615 Pre-XDR-TB lineage2.2.1 None
SRR29539176 MDR-TB lineage4.3.3 None
SRR5153235 MDR-TB lineage2.2.1 None
SRR6964556 RR-TB lineage1.1.2;lineage3 None
SRR11662695 MDR-TB lineage2.2.1 None
ERR13285116 Pre-XDR-TB lineage4.3.3 None
ERR067709 MDR-TB lineage2.2.1 ru
SRR6257088 MDR-TB lineage2.2.1 None
SRR5153834 Pre-XDR-TB lineage2.2.1 None
ERR4553891 MDR-TB lineage2.2.1 None
SRR1184035 Pre-XDR-TB lineage2.2.1 None
ERR4829128 MDR-TB lineage3 pk
ERR4799985 Pre-XDR-TB lineage2.2.1.1 None
SRR671855 Pre-XDR-TB lineage2.2.2 cn
ERR3287855 Pre-XDR-TB lineage4.3.3 pe
SRR5153622 Pre-XDR-TB lineage2.2.1 None
ERR5864566 MDR-TB lineage2.2.1 None
ERR5864568 MDR-TB lineage2.2.1 None
SRR24709901 MDR-TB lineage4.3.3 None
SRR16186845 XDR-TB lineage2.2.1 None
SRR5153594 MDR-TB lineage4.3.3 None
ERR13275993 MDR-TB lineage4.3.3 None
ERR8773519 HR-TB lineage4.4.1.1 None
ERR13284571 Pre-XDR-TB lineage4.3.3 None
SRR1159362 Pre-XDR-TB lineage2.2.1 None
SRR21887709 Pre-XDR-TB lineage2.2.2 None
SRR16088066 XDR-TB lineage2.2.1 None
ERR4830760 MDR-TB lineage3 ir
ERR2516459 MDR-TB lineage2.2.1 nl
SRR15276983 XDR-TB lineage3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR11081748 MDR-TB lineage4.3.3 None
ERR5864577 MDR-TB lineage2.2.1 None
ERR2514633 MDR-TB lineage4.3.4.1 gb
ERR11043275 MDR-TB lineage4.3.3 None
ERR4276858 MDR-TB lineage4.3.3 None
SRR5709921 MDR-TB lineage2.2.1 th
SRR14802140 MDR-TB lineage2.2.1 None
ERR5865905 Pre-XDR-TB lineage2.2.1 None
ERR5864564 MDR-TB lineage2.2.1 None
ERR5864575 MDR-TB lineage2.2.1 None
ERR5864578 MDR-TB lineage2.2.1 None
ERR7975669 MDR-TB lineage4.3.3 None
SRR29093289 MDR-TB lineage4.2.2.2 None
ERR11081175 HR-TB lineage2.2.1 None
ERR11798546 MDR-TB lineage2.2.1 None
SRR18714857 MDR-TB lineage2.2.1 None
SRR24222954 Pre-XDR-TB lineage2.2.1 None
SRR28394226 Pre-XDR-TB lineage2.2.1;lineage4.1.1 None
ERR027463 Pre-XDR-TB lineage2.2.1 None
SRR11662383 MDR-TB lineage2.2.1 None
ERR11082388 MDR-TB lineage4.8 None
ERR4813445 Pre-XDR-TB lineage4.3.3 None
SRR8651658 Pre-XDR-TB lineage2.2.1 cn
ERR5866264 MDR-TB lineage2.2.1 None
ERR2446458 MDR-TB lineage2.2.1 nl
ERR7737727 MDR-TB lineage4.2.2.2 None
ERR067599 MDR-TB lineage4.3.3 ru
ERR8774125 HR-TB lineage4.1.3 None
ERR4799246 Pre-XDR-TB lineage2.2.1 in
SRR5065524 MDR-TB lineage2.2.1 vn
SRR24673521 MDR-TB lineage2.2.1 None
SRR7652970 Pre-XDR-TB lineage2.2.1 None
SRR15276982 XDR-TB lineage3 None
SRR21277271 MDR-TB lineage4.4.2 None
ERR11082636 MDR-TB lineage4.3.3 None
SRR5817472 Pre-XDR-TB lineage2.2.1 au
SRR1002689 MDR-TB lineage2.2.1 None
SRR25827375 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
ERR8773517 HR-TB lineage4.4.1.1 None
ERR4796730 Pre-XDR-TB lineage2.2.1 in
ERR9993163 XDR-TB lineage2.2.1 None
ERR4800090 Pre-XDR-TB lineage4.2.2 in
ERR9993060 XDR-TB lineage2.2.1 None
ERR8665578 Pre-XDR-TB lineage2.2.1 None
ERR7737752 MDR-TB lineage2.2.1 None
ERR7737880 MDR-TB lineage1.1.1.1 None
ERR6359040 MDR-TB lineage4.6.1.2 None
ERR12328166 HR-TB lineage1.1.1;lineage2.2.1 None
ERR11488395 MDR-TB lineage4.1.1.3 None
ERR7911022 MDR-TB lineage4.2.1 None
SRR29230784 MDR-TB lineage4.6.1.2 None
SRR998741 MDR-TB lineage4.1.3;lineage6.3.1 None
SRR25207234 Pre-XDR-TB lineage2.2.1 None
SRR25389551 Pre-XDR-TB lineage2.2.1 None
ERR108490 Sensitive lineage2.2.1 ru
SRR28351390 Pre-XDR-TB lineage2.2.1 None
SAMN02419602 Pre-XDR-TB lineage2.2.1 by
SRR29273831 MDR-TB lineage4.1.2.1 None
SRR29289156 XDR-TB lineage3 None
ERR403240 MDR-TB lineage2.2.1 None
ERR4831607 MDR-TB lineage2.2.1 vn
ERR13288791 XDR-TB lineage2.2.1;lineage2.2.2 None
ERR6359041 MDR-TB lineage4.6.1.2 None
ERR9907775 Pre-XDR-TB lineage4.1.1.1 None
SRR5709935 Pre-XDR-TB lineage2.2.1 th
ERR1215474 MDR-TB lineage5.1.1 gh
SRR1180984 Pre-XDR-TB lineage2.2.1 None
SRR6824312 MDR-TB lineage2.2.1 cn
SRR6785501 MDR-TB lineage2.2.1 None
SRR5341353 XDR-TB lineage2.2.1 in
SRR16186843 HR-TB lineage2.2.1 None
SRR20139563 Pre-XDR-TB lineage4.3.4.2 None
SRR7645956 Pre-XDR-TB lineage2.2.1 None
SRR11662589 MDR-TB lineage2.2.1 None
ERR11080966 MDR-TB lineage4.6.1.2 None
ERR551478 MDR-TB lineage2.2.1 None
ERR8665944 Pre-XDR-TB lineage2.2.1 None
SRR10430321 MDR-TB lineage4.3.3 None
SRR1049970 Pre-XDR-TB lineage4.1.3 None
ERR13285093 MDR-TB lineage4.1.2.1 None
ERR2843540 MDR-TB lineage2.2.1 None
ERR552423 MDR-TB lineage4.3.3 None
ERR1034981 MDR-TB lineage4.1.1.1 za
ERR551477 MDR-TB lineage2.2.1 None
ERR6358870 RR-TB lineage4.6.1.1 None
SAMN02231161 Pre-XDR-TB lineage4.1.3 ml
SRR28240211 MDR-TB lineage2.2.1 None
ERR6359097 MDR-TB lineage4.6.1.2 None
SRR11662211 MDR-TB lineage1.1.1 None
ERR11043007 MDR-TB lineage4.3.3 None
ERR11082787 MDR-TB lineage4.3.3 None
SRR28646113 MDR-TB lineage4.1.2.1 None
SRR998746 MDR-TB lineage4.1.3 None
ERR7737947 MDR-TB lineage4.2.2.2 None
SRR18714993 MDR-TB lineage4.3.3 None
ERR4796771 Pre-XDR-TB lineage2.2.1 in
SRR28393917 MDR-TB lineage4.3.3 None
ERR2653111 Pre-XDR-TB lineage4.1.2.1 None
ERR1203070 MDR-TB lineage5.1.5 gh
ERR4798868 Pre-XDR-TB lineage2.2.1;lineage4 in
ERR11488787 Pre-XDR-TB lineage4.1.1.3 None
ERR133910 Pre-XDR-TB lineage2.2.1 ru
ERR5864574 MDR-TB lineage2.2.1 None
ERR552426 MDR-TB lineage4.3.3 None
SRR28394214 MDR-TB lineage4.3.3 None
SRR29231814 MDR-TB lineage4.6.1.2 None
SRR28393943 MDR-TB lineage4.3.3 None
ERR2510490 Pre-XDR-TB lineage3 pk
ERR5864579 MDR-TB lineage2.2.1 None
SRR6257043 MDR-TB lineage2.2.1 None
ERR8665703 Pre-XDR-TB lineage2.2.1 None
SRR25827457 Pre-XDR-TB lineage1.2.2.2;lineage3 None
ERR9993185 XDR-TB lineage2.2.1 None
SRR1181247 MDR-TB lineage2.2.1 None
ERR5865810 MDR-TB lineage4.3.3 None
SRR11662159 MDR-TB lineage2.2.1 None
SRR29055608 MDR-TB lineage4.4.1.1 None
ERR13285100 MDR-TB lineage4.3.3 None
ERR13285723 MDR-TB lineage2.2.1 None
SRR25206920 MDR-TB lineage2.2.2 None
ERR6358715 MDR-TB lineage4.6.1.2 None
ERR275198 MDR-TB lineage4.3.4.1 pt
ERR2707095 MDR-TB lineage4.6.1.2 cd
SRR29230785 MDR-TB lineage4.3.4.1 None
ERR11488748 Pre-XDR-TB lineage4.1.1.3 None
ERR13276310 Pre-XDR-TB lineage4.3.3 None
ERR9786768 Other lineage4.3.4.2 None
ERR5866462 MDR-TB lineage2.2.1 None
ERR6359100 MDR-TB lineage4.6.1.2 None
ERR4830780 MDR-TB lineage4.3.3 ir
ERR11798612 MDR-TB lineage2.2.1 None
SRR5818577 MDR-TB lineage4.2.2.2 dj
SRR11241400 Pre-XDR-TB lineage4.3.3 None
ERR10762236 MDR-TB lineage2.2.1 None
SRR25207252 MDR-TB lineage2.2.1 None
SRR7516317 Pre-XDR-TB lineage2.2.1 None
SRR29289363 Pre-XDR-TB lineage3 None
ERR6359029 MDR-TB lineage4.6.1.2 None
ERR751313 MDR-TB lineage5.1.1 gh
SRR5486873 MDR-TB lineage4.8 None
SRR24256059 MDR-TB lineage4.3.3 None
SRR10828185 Pre-XDR-TB lineage2.2.1 None
ERR5864572 MDR-TB lineage2.2.1 None
ERR2516827 MDR-TB lineage3;lineage4 gb
ERR551014 MDR-TB lineage4.4.1.1 sz
ERR1215480 MDR-TB lineage5.1.5 gh
SRR1002694 HR-TB lineage2.2.1 None
ERR11081133 Pre-XDR-TB lineage4.3.3 None
SRR28351445 Pre-XDR-TB lineage3.1.2 None
SRR29356714 Pre-XDR-TB lineage2.2.1 None
ERR9027231 Pre-XDR-TB lineage3.1.2.1 None
ERR11081600 MDR-TB lineage2.2.1 None
ERR11081850 MDR-TB lineage4.3.3 None
DRR130080 Pre-XDR-TB lineage2.2.2 None
ERR11081111 MDR-TB lineage4.8 None
SRR24710147 Pre-XDR-TB lineage4.3.3 None
SRR25207138 MDR-TB lineage2.2.1 None
SRR28706489 MDR-TB lineage4.3.3 None
ERR5864581 Pre-XDR-TB lineage2.2.1 None
ERR13284906 MDR-TB lineage4.3.3 None
SAMN02419547 MDR-TB lineage2.2.1 by
SRR29772448 Pre-XDR-TB lineage3 None
ERR11081209 MDR-TB lineage4.3.3 None
SRR22175205 Pre-XDR-TB lineage2.2.1.1 None
SRR20632794 MDR-TB lineage2.2.1.1 None
SRR20969933 MDR-TB lineage4.1.1.3 None
SRR27069406 Pre-XDR-TB lineage4.4.2 None
SRR28046348 Pre-XDR-TB lineage4.1.1.3 None
SRR25827565 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR28706437 HR-TB lineage4.3.3 None
SRR1162498 Pre-XDR-TB lineage2.2.1 None
SRR28045921 Pre-XDR-TB lineage4.1.1.3 None
SRR28394217 Pre-XDR-TB lineage4.1.1 None
SRR28240056 Pre-XDR-TB lineage2.2.1 None
SRR25827635 Pre-XDR-TB lineage2.2.1.1;lineage3 None