Rv3794 - c.867T>C
Drug resistance types
11 Sensitive
1 RR-TB
7 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1.1.3.1 | 16 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage1.1.3.1;lineage1.2.2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR6650270 | Sensitive | lineage1.1.3.1 | None | ERR7902640 | Other | lineage1.1.3.1 | None | ERR7902672 | Sensitive | lineage1.1.3.1 | None | ERR4797089 | Pre-XDR-TB | lineage1.1.3.1;lineage4.3.3 | in | SRR6797707 | Sensitive | lineage1.1.3.1;lineage1.2.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR28860072 | Sensitive | lineage1.1.3.1 | None | SRR28860115 | Sensitive | lineage1.1.3.1 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR22424764 | MDR-TB | lineage1.1.3.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6797402 | Sensitive | lineage1.1.3.1 | None | SRR6797731 | Other | lineage1.1.3.1 | None | SRR6650409 | HR-TB | lineage1.1.3.1 | None | SRR30182626 | Sensitive | lineage1.1.3.1 | None | SRR6797364 | Sensitive | lineage1.1.3.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR6650414 | Other | lineage1.1.3.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR26112789 | Sensitive | lineage1.1.3.1 | None | SRR6797822 | Other | lineage1.1.3.1 | None | SRR6650344 | Sensitive | lineage1.1.3.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR29231319 | Sensitive | lineage1.1.3.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
|---|
