Rv3795 - c.-342C>T
Drug resistance types
15 Sensitive
3 RR-TB
2 HR-TB
14 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 27 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12882449 | Sensitive | lineage1.1.3.1 | None | SRR18693877 | Sensitive | lineage1.1.3.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR8479577 | Sensitive | lineage1.1.3.1 | None | SRR18693862 | Sensitive | lineage1.1.3.1 | None | SRR18693873 | Sensitive | lineage1.1.3.1 | None | SRR18693892 | Sensitive | lineage1.1.3.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR11488445 | MDR-TB | lineage1.1.3.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR18693865 | MDR-TB | lineage1.1.3.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR18693891 | Sensitive | lineage1.1.3.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR11252550 | Sensitive | lineage1.1.3.1 | None | SRR18693872 | MDR-TB | lineage1.1.3.1 | None | ERR11488379 | MDR-TB | lineage1.1.3.1 | None | ERR11489060 | MDR-TB | lineage1.1.3.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR18693861 | Sensitive | lineage1.1.3.1 | None | SRR18693885 | Sensitive | lineage1.1.3.1 | None | SRR18693876 | Sensitive | lineage1.1.3.1 | None | SRR18693866 | HR-TB | lineage1.1.3.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR18693893 | MDR-TB | lineage1.1.3.1 | None | ERR11488796 | Pre-XDR-TB | lineage1.1.3.1 | None | ERR11488774 | MDR-TB | lineage1.1.3.1 | None | SRR18693895 | Sensitive | lineage1.1.3.1 | None | SRR18693868 | HR-TB | lineage1.1.3.1 | None | ERR7902730 | Other | lineage1.1.3.1 | None | SRR18693869 | Sensitive | lineage1.1.3.1 | None | SRR18693855 | Sensitive | lineage1.1.3.1 | None | ERR7737951 | MDR-TB | lineage1.1.3.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
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