Rv3806c - c.703C>T
Drug resistance types
11 Sensitive
2 RR-TB
12 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| 3 | |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.2 | 14 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage1.1.2;lineage4.8 | 1 |
| lineage2.2.1 | 2 |
| lineage4.9 | 6 |
| M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.1 | 1 |
| lineage2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9787197 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4407512 | Sensitive | lineage1.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | SRR25827321 | Pre-XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR25206861 | MDR-TB | lineage4.5 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR10225545 | Other | lineage1.1.2;lineage4.8 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR9030411 | Sensitive | lineage1.1.2 | None | SRR12882685 | Sensitive | lineage1.1.2 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12882691 | Sensitive | lineage1.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR12882474 | Sensitive | lineage1.1.2 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR12882445 | Sensitive | lineage1.1.2 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9030490 | MDR-TB | lineage1.1.2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR9030313 | MDR-TB | lineage1.1.2 | None | SRR12882677 | Sensitive | lineage1.1.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR10225513 | Sensitive | lineage1.1.2 | None | ERR9030442 | MDR-TB | lineage1.1.2 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR9786101 | Sensitive | lineage4.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR12882470 | Sensitive | lineage1.1.2 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR12882468 | HR-TB | lineage1.1.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9030297 | Sensitive | lineage1.1.2 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None |
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