lineage | Count |
---|---|
lineage4.1.1.3 | 118 |
lineage4.6 | 3 |
lineage2.2.1 | 3 |
lineage1.1.1.1 | 2 |
lineage4.1.1.1 | 3 |
lineage4 | 2 |
lineage3.1 | 1 |
lineage4.1.1.3;lineage4.7 | 2 |
lineage4.3.3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.8 | 1 |
lineage3;lineage4.1.1.3 | 2 |
lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 140 |
ID | Drug resistance | Lineage | Country iso2 | SRR29289265 | XDR-TB | lineage4.1.1.3 | None | ERR13288917 | Sensitive | lineage4.1.1.3 | None | ERR9806861 | Sensitive | lineage4.1.1.3 | None | ERR181847 | Sensitive | lineage4.1.1.3 | mw | ERR279529 | Sensitive | lineage4.1.1.3 | None | ERR3340707 | Sensitive | lineage4.1.1.3 | za | ERR3340737 | Sensitive | lineage4.1.1.3 | za | ERR3340745 | Sensitive | lineage4.1.1.3 | za | ERR8975151 | Sensitive | lineage4.1.1.3 | None | SRR18213657 | Sensitive | lineage4.1.1.3 | None | ERR4817113 | Sensitive | lineage4.6 | None | SRR10869087 | Sensitive | lineage4.1.1.3 | None | SRR6397552 | Sensitive | lineage2.2.1 | ca | SRR28409675 | Other | lineage4.1.1.3 | None | SRR29055845 | Sensitive | lineage4.1.1.3 | None | ERR13246475 | Sensitive | lineage1.1.1.1 | None | ERR8975926 | Sensitive | lineage4.1.1.3 | None | SRR10869030 | Sensitive | lineage4.1.1.3 | None | ERR279501 | Sensitive | lineage4.1.1.3 | None | ERR3340742 | Sensitive | lineage4.1.1.3 | za | SRR29055512 | Sensitive | lineage4.1.1.3 | None | ERR1750935 | Sensitive | lineage4.1.1.3 | za | ERR8158080 | Sensitive | lineage2.2.1 | None | ERR1750936 | Sensitive | lineage4.1.1.3 | za | ERR13266656 | Sensitive | lineage4.1.1.1 | None | ERR11252523 | Sensitive | lineage4.1.1.3 | None | ERR3340741 | Sensitive | lineage4.1.1.3 | za | ERR473348 | Sensitive | lineage4.1.1.3 | None | ERR7911465 | Sensitive | lineage4.1.1.3 | za | ERR279648 | Sensitive | lineage4.1.1.3 | None | ERR11775009 | RR-TB | lineage4.1.1.3 | None | ERR8686574 | Sensitive | lineage4.1.1.3 | None | SRR29056072 | Sensitive | lineage4.1.1.3 | None | SRR6982449 | Sensitive | lineage4.1.1.3 | None | SRR2101378 | Sensitive | lineage4.1.1.3 | None | ERR9993217 | RR-TB | lineage4.1.1.3 | None | ERR11050348 | Sensitive | lineage4.1.1.3 | None | ERR2512728 | Sensitive | lineage4.1.1.3 | gb | ERR495120 | Sensitive | lineage4.1.1.3 | None | ERR4800101 | MDR-TB | lineage4.1.1.1 | None | SRR16156194 | RR-TB | lineage4.1.1.3 | None | ERR7911521 | Sensitive | lineage4.1.1.3 | za | SRR10315587 | RR-TB | lineage4.1.1.3 | None | SRR10869053 | Sensitive | lineage4.1.1.3 | None | SRR10869310 | Sensitive | lineage4.1.1.3 | None | SRR10808676 | Sensitive | lineage4 | None | SRR16156238 | RR-TB | lineage4.1.1.3 | None | ERR279589 | Sensitive | lineage4.1.1.3 | None | ERR8686194 | Sensitive | lineage4.1.1.3 | None | ERR8686594 | Sensitive | lineage4.1.1.3 | None | SRR16156206 | RR-TB | lineage4.1.1.3 | None | SRR29055869 | Sensitive | lineage4.1.1.3 | None | ERR7737686 | RR-TB | lineage4.1.1.3 | None | ERR7911624 | Sensitive | lineage4.1.1.3 | za | SRR29056050 | Sensitive | lineage4.1.1.3 | None | SRR29055810 | Sensitive | lineage4.1.1.3 | None | ERR4796741 | Sensitive | lineage3.1 | in | SRR2101565 | Sensitive | lineage4.1.1.3 | None | ERR3340720 | Sensitive | lineage4.1.1.3 | za | SRR10869229 | Sensitive | lineage4.1.1.3 | None | SRR10869308 | Sensitive | lineage4.1.1.3 | None | ERR212050 | Sensitive | lineage4.1.1.3 | mw | ERR1633802 | Sensitive | lineage4.1.1.3 | za | ERR1633953 | Sensitive | lineage4.1.1.3 | za | ERR2660420 | Sensitive | lineage4.1.1.3 | None | ERR10748369 | RR-TB | lineage4.1.1.3 | None | ERR495179 | Sensitive | lineage4.1.1.3 | None | ERR1633833 | Sensitive | lineage4.1.1.3 | za | ERR13285253 | Sensitive | lineage4.1.1.3 | None | ERR495060 | Sensitive | lineage4.1.1.3 | None | ERR3340736 | Sensitive | lineage4.1.1.3 | za | ERR3340713 | Sensitive | lineage4.1.1.3 | za | ERR495024 | Sensitive | lineage4.1.1.3;lineage4.7 | None | SRR6896483 | Sensitive | lineage4.1.1.3 | None | SRR29096867 | Sensitive | lineage4.1.1.3 | None | ERR11811413 | Sensitive | lineage4.1.1.3 | None | ERR8686192 | Sensitive | lineage4.1.1.3 | None | SRR10868991 | Sensitive | lineage4.1.1.3 | None | ERR1034980 | HR-TB | lineage4.1.1.3 | za | ERR11043357 | Sensitive | lineage4.1.1.3 | None | ERR9992635 | XDR-TB | lineage4.3.3 | None | SRR29096840 | RR-TB | lineage4.1.1.3 | None | SRR3105804 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR6153190 | Sensitive | lineage4.1.1.1 | ca | DRR188679 | Sensitive | lineage1.1.1.1 | None | SRR18213794 | Sensitive | lineage4.1.1.3 | None | ERR228229 | Sensitive | lineage4.1.1.3 | None | ERR10748486 | MDR-TB | lineage4.1.1.3 | None | ERR4819154 | Sensitive | lineage4.1.1.3 | None | ERR4814487 | Sensitive | lineage4.6 | gb | SRR10869113 | Sensitive | lineage4.1.1.3 | None | SRR23340116 | Sensitive | lineage4.8 | None | ERR3340739 | Sensitive | lineage4.1.1.3 | za | ERR495032 | Sensitive | lineage4.1.1.3 | None | ERR8686572 | Sensitive | lineage4.1.1.3 | None | ERR126632 | Sensitive | lineage4.1.1.3 | mw | SRR2100583 | Sensitive | lineage4.1.1.3 | None | SRR29093975 | Sensitive | lineage4.1.1.3 | None | SRR29056066 | Sensitive | lineage4.1.1.3 | None | ERR495013 | Sensitive | lineage4.1.1.3 | None | ERR5918081 | Sensitive | lineage4.1.1.3 | si | ERR4821907 | Sensitive | lineage4.1.1.3 | gb | SRR28044803 | Pre-XDR-TB | lineage3;lineage4.1.1.3 | None | SRR29093409 | Sensitive | lineage4.1.1.3 | None | ERR108136 | Sensitive | lineage4.1.1.3 | za | ERR4821145 | Sensitive | lineage4.6 | None | SRR29093640 | Sensitive | lineage4.1.1.3 | None | SRR15316218 | Sensitive | lineage2.2.1 | None | ERR1023425 | Sensitive | lineage4.1.1.3 | None | SRR29056320 | Sensitive | lineage4.1.1.3 | None | ERR2512609 | Sensitive | lineage4.1.1.3 | gb | ERR11067800 | Sensitive | lineage4.1.1.3 | None | ERR1633793 | Sensitive | lineage4.1.1.3;lineage4.7 | za | ERR1633889 | Sensitive | lineage4.1.1.3 | za | SRR29055879 | Sensitive | lineage4.1.1.3 | None | ERR279482 | Sensitive | lineage4.1.1.3 | None | ERR11811455 | Sensitive | lineage4.1.1.3 | None | SRR29094072 | Sensitive | lineage4.1.1.3 | None | ERR13291769 | Other | lineage4.1.1.3 | None | ERR1034929 | Sensitive | lineage4.1.1.3 | za | ERR3340733 | Sensitive | lineage4.1.1.3 | za | ERR7911758 | Sensitive | lineage4.1.1.3 | za | ERR108135 | Sensitive | lineage4.1.1.3 | za | ERR1633781 | Sensitive | lineage4.1.1.3 | None | ERR8686573 | Sensitive | lineage4.1.1.3 | None | ERR10969261 | Other | lineage6.1.3 | None | SRR3725663 | Sensitive | lineage4.1.1.3 | None | ERR3340714 | Sensitive | lineage4.1.1.3 | za | ERR8975837 | MDR-TB | lineage4.1.1.3 | None | ERR2515248 | RR-TB | lineage4.1.1.3 | za | ERR8686193 | Sensitive | lineage4.1.1.3 | None | ERR8699750 | Sensitive | lineage4.1.1.3 | None | ERR279493 | Sensitive | lineage4.1.1.3 | None | ERR3340731 | Sensitive | lineage4.1.1.3 | za | ERR2184348 | Sensitive | lineage4 | pe | SRR5341398 | Pre-XDR-TB | lineage3;lineage4.1.1.3 | in | SRR7070238 | Sensitive | lineage4.1.1.3 | None | ERR3340743 | Sensitive | lineage4.1.1.3 | za | ERR1873517 | RR-TB | lineage4.1.1.3 | za | SRR10869279 | Sensitive | lineage4.1.1.3 | None |
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