Rv3862c - c.-319T>C
Drug resistance types
94 Sensitive
1 RR-TB
6 HR-TB
18 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 64 |
| lineage4.4.1.1 | 4 |
| lineage4.8 | 6 |
| lineage1.2.2.2 | 16 |
| lineage2.2.1 | 11 |
| lineage4.3.4.1 | 7 |
| lineage2.2.1.1 | 1 |
| 1 | |
| La1.8.1 | 1 |
| lineage4.4.2 | 7 |
| lineage6.1.3 | 2 |
| lineage1.1.2 | 2 |
| lineage4.7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage3 | 2 |
| lineage4.5 | 2 |
| lineage1.2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8.1 | 2 |
| La3 | 1 |
| La2 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2503393 | Sensitive | lineage4.1.2.1 | None | ERR2515461 | Sensitive | lineage4.4.1.1 | None | ERR2653132 | Pre-XDR-TB | lineage4.8 | None | SRR7070600 | Sensitive | lineage4.1.2.1 | None | ERR9121236 | Sensitive | lineage4.1.2.1 | None | ERR7975635 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7902603 | Sensitive | lineage1.2.2.2 | None | ERR11050057 | Sensitive | lineage4.1.2.1 | None | ERR11049739 | Sensitive | lineage4.1.2.1 | None | ERR8975927 | HR-TB | lineage4.4.1.1 | None | ERR2884626 | Sensitive | lineage4.1.2.1 | es | SRR21732291 | Sensitive | lineage2.2.1 | None | ERR4024881 | Sensitive | lineage4.3.4.1 | None | SRR21689690 | Sensitive | lineage4.1.2.1 | None | ERR8774367 | Sensitive | lineage4.1.2.1 | None | ERR552227 | Sensitive | lineage4.1.2.1 | de | SRR15600358 | MDR-TB | lineage2.2.1.1 | None | ERR2884661 | Sensitive | lineage4.1.2.1 | None | ERR2884634 | Sensitive | lineage4.1.2.1 | es | ERR2432992 | HR-TB | lineage4.3.4.1 | br | SRR28351186 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553459 | MDR-TB | None | SRR28409286 | Sensitive | lineage4.1.2.1 | None | SRR28044820 | MDR-TB | lineage1.2.2.2 | None | SRR29748661 | Sensitive | lineage4.1.2.1 | None | ERR2884652 | Sensitive | lineage4.1.2.1 | None | ERR9121191 | Sensitive | lineage4.1.2.1 | None | SRR21728343 | Sensitive | lineage4.1.2.1 | None | SRR5430747 | Other | La1.8.1 | None | SRR1180313 | Sensitive | lineage4.1.2.1 | None | ERR7975632 | MDR-TB | lineage4.1.2.1 | None | ERR11068059 | Sensitive | lineage4.1.2.1 | None | SRR17732460 | Sensitive | lineage4.4.2 | None | ERR551491 | Sensitive | lineage4.1.2.1 | None | ERR9787270 | Other | lineage6.1.3 | None | ERR2179703 | Sensitive | lineage4.4.2 | cn | SRR6797615 | Sensitive | lineage1.2.2.2 | None | ERR11050339 | Sensitive | lineage4.1.2.1 | None | ERR2652989 | Sensitive | lineage4.1.2.1 | None | SRR6832563 | Sensitive | lineage4.1.2.1 | None | SRR20969599 | Sensitive | lineage4.4.2 | None | ERR9030363 | MDR-TB | lineage1.1.2 | None | SRR16115883 | Other | lineage1.2.2.2 | None | SRR22251740 | Sensitive | lineage2.2.1 | None | SRR2082763 | Sensitive | lineage1.2.2.2 | None | ERR11081266 | Sensitive | lineage4.7 | None | SRR21732519 | Sensitive | lineage2.2.1 | None | SRR21733016 | Sensitive | lineage2.2.1 | None | SRR7276706 | Sensitive | lineage4.3.4.2 | None | ERR2653020 | Sensitive | lineage4.3.4.1 | None | SRR21239894 | Sensitive | lineage4.1.2.1 | None | ERR4553470 | MDR-TB | lineage4 | None | ERR11465007 | Sensitive | lineage4.3.4.2.1 | None | ERR551884 | Sensitive | lineage4.1.2.1 | de | ERR6865981 | Sensitive | lineage4.3.4.1 | None | SRR6964489 | MDR-TB | lineage3 | None | SRR6855771 | Sensitive | lineage4.4.1.1 | None | ERR7975647 | MDR-TB | lineage4.1.2.1 | None | ERR11044909 | Sensitive | lineage4.1.2.1 | None | ERR11081751 | Sensitive | lineage4.1.2.1 | None | ERR11067261 | Sensitive | lineage4.1.2.1 | None | SAMN02585932 | Sensitive | lineage4.1.2.1 | za | DRR474046 | Other | lineage4.5 | None | ERR4797900 | Sensitive | lineage1.2.2.2 | None | ERR7975679 | MDR-TB | lineage4.1.2.1 | None | SRR6650137 | Sensitive | lineage1.2.2.2 | None | ERR7975633 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11069084 | MDR-TB | lineage4.1.2.1 | None | SRR16058537 | Sensitive | lineage1.2.2.2 | None | ERR4797812 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR2884643 | Sensitive | lineage4.1.2.1 | es | ERR11083163 | MDR-TB | lineage4.1.2.1 | None | ERR4810719 | Sensitive | lineage2.2.1 | cn | SRR21732998 | Sensitive | lineage2.2.1 | None | ERR2653043 | Sensitive | lineage4.3.4.1 | None | ERR7902766 | Other | lineage1.2.2.1 | None | SRR21732617 | Sensitive | lineage2.2.1 | None | ERR4818108 | Sensitive | lineage4.1.2.1 | None | SRR28514704 | Sensitive | lineage4.1.2.1 | None | SRR17732469 | Sensitive | lineage4.4.2 | None | SRR1181350 | Sensitive | lineage4.1.2.1 | None | ERR4553711 | MDR-TB | lineage1.2.2.2 | None | ERR2653116 | Pre-XDR-TB | lineage4.8 | None | DRR473773 | Sensitive | lineage2.2.2 | None | ERR4553706 | MDR-TB | lineage1.2.2.2 | None | ERR3806605 | Other | lineage6.1.3 | None | ERR2515992 | Sensitive | lineage4.8.1 | za | ERR2514477 | Sensitive | lineage4.1.2.1 | gb | ERR4797970 | Sensitive | lineage1.1.2 | in | SRR27450393 | Other | La3 | None | ERR2884669 | Sensitive | lineage4.1.2.1 | es | ERR9121483 | Sensitive | lineage4.1.2.1 | None | ERR2516265 | Sensitive | lineage4.4.1.1 | be | ERR9121462 | Sensitive | lineage4.1.2.1 | None | ERR1465805 | HR-TB | lineage4.1.2.1 | ch | SRR21798494 | HR-TB | lineage4.1.2.1 | None | SRR21690151 | Sensitive | lineage4.1.2.1 | None | ERR551493 | Sensitive | lineage4.1.2.1 | None | ERR11044908 | Sensitive | lineage4.1.2.1 | None | ERR11043899 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2884671 | Sensitive | lineage4.1.2.1 | es | ERR11080893 | Sensitive | lineage4.1.2.1 | None | ERR11068075 | Other | lineage4.1.2.1 | None | ERR7975637 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR21732643 | Sensitive | lineage2.2.1 | None | ERR4553887 | MDR-TB | lineage4 | None | ERR3994097 | Sensitive | lineage4.1.2.1 | None | ERR9121293 | Sensitive | lineage4.1.2.1 | None | ERR4810889 | Pre-XDR-TB | lineage4.4.2 | cn | ERR8774366 | Sensitive | lineage4.1.2.1 | None | ERR12544076 | Sensitive | lineage4.1.2.1 | None | SRR23339979 | Sensitive | lineage4.8 | None | ERR11082320 | Sensitive | lineage4.1.2.1 | None | SRR15316341 | MDR-TB | lineage4.5 | None | SRR15399209 | Sensitive | lineage4.8 | None | SRR13888751 | Sensitive | La2 | None | SRR5065294 | Sensitive | lineage2.1 | vn | ERR2652997 | Pre-XDR-TB | lineage4.8 | None | SRR28045769 | Sensitive | lineage1.2.2.2 | None | SRR29124256 | HR-TB | lineage1.2.2.2 | None | SRR29681335 | Sensitive | lineage4.1.2.1 | None | ERR7975685 | MDR-TB | lineage4.1.2.1 | None | SRR21663277 | RR-TB | lineage4.1.2.1 | None | ERR7363022 | Sensitive | lineage4.3.4.1 | None | ERR3994107 | Sensitive | lineage4.1.2.1 | None | SRR1710098 | Sensitive | lineage2.2.1 | cn | ERR4815674 | HR-TB | lineage3 | gb | SRR18911992 | Other | lineage1.2.2.2 | None | ERR4814125 | Sensitive | lineage4.3.4.1 | br | SRR1180439 | Sensitive | lineage4.1.2.1 | None | ERR2653134 | Pre-XDR-TB | lineage4.8 | None | SRR21732233 | Sensitive | lineage1.2.2.2 | None | SRR6856061 | Sensitive | lineage4.8.1 | None | SRR25207116 | Pre-XDR-TB | lineage4.4.2 | None | ERR4553942 | MDR-TB | lineage4 | None | ERR11465006 | Sensitive | lineage4.3.4.2.1 | None | ERR9125770 | Sensitive | lineage1.2.2.2 | None | SRR12142410 | MDR-TB | lineage4.4.2 | None | ERR551492 | Sensitive | lineage4.1.2.1 | None | SRR21733033 | Sensitive | lineage2.2.1 | None |
|---|
