EBG00000313325 - n.421C>A


Drug resistance types
35 Sensitive 6 RR-TB 33 HR-TB 20 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 4 Other
lineage Counts
lineage Count
lineage4.4.1.1 8
lineage2.2.1;lineage4 2
lineage2.2.1 19
lineage2.2.2 19
lineage2.2.2;lineage4 5
lineage5.1.1 4
lineage4.6.1.1 11
lineage4.9 8
lineage4.6.1.2 3
lineage2 1
lineage6.2.1 1
lineage3 6
lineage4 3
lineage4.8.1 2
lineage2.2.1.1 2
lineage4.5 2
lineage2.2.1;lineage2.2.2 4
lineage4.3.4.1;lineage4.9 1
lineage2;lineage4.9 1
lineage4.3.4.2.1 2
lineage4.1.2.1 1
lineage2.2.1.1;lineage4 1
lineage5.1.2 1
lineage4.4.1.2 1
lineage2.2;lineage4 2
lineage4.3.3 2
spoligotype Counts
spoligotype Count
None 112
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR17567930 Sensitive lineage4.4.1.1 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
ERR751329 Sensitive lineage5.1.1 None
ERR751336 Sensitive lineage5.1.1 None
SAMN02381005 Sensitive lineage4.6.1.1 None
SRR1047993 HR-TB lineage2.2.1 None
ERR473279 Other lineage4.9 None
SRR1062933 Sensitive lineage4.9 None
ERR751317 Sensitive lineage4.9 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR1013583 Sensitive lineage2.2.2 None
ERR192070 Sensitive lineage4.9 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
SRR1049040 HR-TB lineage2 None
SRR1062895 Sensitive lineage4.6.1.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1013608 Sensitive lineage2.2.2 None
ERR751332 Sensitive lineage6.2.1 None
ERR4831837 MDR-TB lineage2.2.1 None
SAMN02360577 HR-TB lineage3 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
SRR16100231 Other lineage4 None
SRR1049735 Sensitive lineage4.9 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR1013600 Sensitive lineage2.2.1.1 None
ERR4829238 Sensitive lineage3 None
SRR1048997 HR-TB lineage2.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR1049724 MDR-TB lineage4.6.1.1 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SAMN02381047 Sensitive lineage4.6.1.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SAMN02381009 MDR-TB lineage4.4.1.1 None
SRR1140627 Sensitive lineage4.6.1.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1013612 Sensitive lineage4.5 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR7131160 Sensitive lineage3 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
ERR751330 MDR-TB lineage5.1.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1013584 HR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR1049744 Sensitive lineage4.6.1.1 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
ERR2517457 Sensitive lineage3 None
SRR1140586 Sensitive lineage4.9 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1048853 HR-TB lineage2;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SAMN02360585 HR-TB lineage4.5 None
ERR751339 Sensitive lineage5.1.2 None
SRR1013553 MDR-TB lineage2.2.2 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1013607 HR-TB lineage2.2.2 None
SRR1013604 HR-TB lineage2.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR1049629 MDR-TB lineage4.4.1.1 None
ERR2446544 Sensitive lineage3 nl
SRR17567887 Sensitive lineage4.4.1.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1062937 Sensitive lineage4.6.1.1 None
ERR3275548 Sensitive lineage3 nl
ERR4831798 HR-TB lineage2.2.1 vn
SRR1013609 Sensitive lineage4 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049743 Sensitive lineage4.6.1.1 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1048993 HR-TB lineage4.9 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR1049622 MDR-TB lineage4.4.1.1 None
SRR1013610 Sensitive lineage4 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048992 HR-TB lineage2.2;lineage4 None
ERR751338 Other lineage5.1.1 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1049723 MDR-TB lineage4.6.1.1 None
SRR1049736 Sensitive lineage4.9 None
SRR11349133 MDR-TB lineage4.3.3 None