EBG00000313325 - n.825_838delGGGTTTCCTTCCTTinsTAGACCCTTTCCG
Drug resistance types
0 Sensitive
7 RR-TB
2 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 2 |
| lineage2.2.1 | 3 |
| lineage3 | 7 |
| lineage3.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9 | 6 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.8.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR6046729 | Other | lineage3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR7070665 | HR-TB | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR7070461 | Other | lineage3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070532 | Other | lineage4.7 | None | ERR867574 | Other | lineage4.9 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR6044904 | Other | lineage3 | None |
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