EBG00000313325 - n.837_838delTTinsCG
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 5 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.1 | 4 |
| lineage4.3.3 | 2 |
| lineage4.7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3 | 5 |
| lineage4.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2 | 2 |
| lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342680 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR6046359 | Other | lineage4.7 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR7069760 | Other | lineage3 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7069013 | Other | lineage4.8 | None | SRR7069319 | Other | lineage4.5 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045199 | Other | lineage2.2.1 | None | SRR6045618 | Other | lineage3.1.2 | None | ERR867566 | Other | lineage4.9 | None | SRR6045110 | Other | lineage3 | None | SRR6045726 | Other | lineage3 | None | SRR5007180 | Other | lineage2.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7069018 | Other | lineage4.8 | None | SRR6045599 | Other | lineage4.8 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR11349182 | MDR-TB | lineage2.2.1 | None | SRR12062482 | MDR-TB | lineage2.2.1.1 | None | ERR9117841 | Other | lineage4.8.2 | None | SRR7069074 | Other | lineage3 | None |
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