EBG00000313339 - n.1480A>T
Drug resistance types
12 Sensitive
11 RR-TB
8 HR-TB
7 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| lineage4.3.3 | 7 |
| lineage4.9 | 8 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 14 |
| lineage4.3 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2.1 | 3 |
| lineage4.8 | 14 |
| La1.4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.6.5 | 1 |
| lineage3 | 22 |
| lineage1.1.3.1 | 2 |
| lineage4.1 | 1 |
| lineage1.2.1.1 | 3 |
| lineage5 | 1 |
| lineage4 | 4 |
| lineage3.1.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 4 |
| lineage4.6 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 28 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796578 | Other | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796596 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16100241 | Other | lineage1.2.1.2.1 | None | SRR16149168 | MDR-TB | lineage4.2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4814745 | Other | lineage4.6.5 | None | SRR22048374 | Sensitive | lineage4.8 | None | ERR4815640 | Other | lineage3 | gb | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR2228965 | Other | lineage4.8 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816068 | HR-TB | lineage1.2.1.1 | gb | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816232 | Other | lineage4 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816464 | Other | lineage3 | None | ERR4817389 | Other | lineage3 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4816688 | Other | lineage4.2.2.2 | gb | ERR2229366 | Other | lineage4.8 | None | ERR4818691 | Other | lineage4.8 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR2228890 | Other | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4817874 | Other | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2513298 | Other | lineage4.8 | gb | ERR4818570 | Other | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4819192 | Other | lineage3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR2513814 | Sensitive | lineage4.3.4.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819324 | Other | lineage4.8 | gb | ERR2514261 | Other | lineage3 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819476 | Sensitive | lineage4.3.2 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4819497 | Sensitive | lineage4.4.1.2 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514409 | Sensitive | lineage3 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514673 | Other | lineage4.1.2.1 | gb | ERR4819868 | MDR-TB | lineage4.2.2.1 | gb | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR2514848 | HR-TB | lineage2.2.1 | gb | ERR2515032 | Other | lineage3 | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4820939 | Sensitive | lineage4.2.2.2 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821828 | Other | lineage4.1.2.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | SRR6045705 | Other | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | SRR5818672 | Other | lineage1.2.2.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046679 | Other | lineage3 | gb | ERR017781 | Other | lineage3 | None | ERR4829337 | Other | lineage4.8 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR7131287 | Other | lineage2.2.1.1 | None |
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