EBG00000313339 - n.87T>C
Drug resistance types
7 Sensitive
9 RR-TB
3 HR-TB
4 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 9 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.6.2.2 | 4 |
| lineage1.2.1.2.1 | 2 |
| lineage3 | 2 |
| lineage4.1.3 | 1 |
| lineage4.8 | 5 |
| lineage4.4 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1 | 5 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.7 | 1 |
| lineage4 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.6 | 1 |
| La1.6 | 1 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675527 | RR-TB | lineage4.9 | None | ERR4817488 | Other | lineage4.3.4.2.1 | None | ERR4816363 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2510809 | Sensitive | lineage1.2.1.2.1 | None | SRR6045481 | Sensitive | lineage3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | SRR6045894 | Other | lineage4.8 | None | SRR6044787 | Other | lineage4.4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7131135 | Sensitive | lineage1.2.1.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796597 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | ERR6197036 | Other | lineage4 | None | ERR9117704 | Other | lineage4.6 | None | ERR4407470 | HR-TB | lineage4.6.2.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR8025567 | Pre-XDR-TB | lineage2.2.2 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR2101671 | Sensitive | lineage4.9 | None | ERR2229590 | Sensitive | lineage4.8 | None | ERR4814963 | Other | lineage4.1.2.1 | None |
|---|
